prot_F-serratus_M_contig805.19451.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig805.19451.1
Unique Nameprot_F-serratus_M_contig805.19451.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length107
Homology
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BLAST of mRNA_F-serratus_M_contig805.19451.1 vs. uniprot
Match: D7FM05_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM05_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 4.590e-39
Identity = 72/107 (67.29%), Postives = 89/107 (83.18%), Query Frame = 0 
Query:    1 MYGSTSTT-SSVQSKRLIDDSLAVSNETLGIADEVIGRLYGQREALETTQTRLGEMQGMTDDARWALRELERKSFMQKICLYSTIAILSILILLVAYREITNSGKLF 106
            MYGST+TT SS QS+RL+DDSLAV NET  +AD+V+ RL+GQRE LE+ Q RLG+M+GMTD+AR  L+E+E+K+  QKICLY TIA+LSILI LV YRE+TN G LF
Sbjct:    1 MYGSTTTTPSSAQSRRLLDDSLAVQNETSNMADDVMARLFGQRETLESAQQRLGDMRGMTDEARLHLKEMEQKALRQKICLYLTIALLSILICLVIYREVTNGGHLF 107
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig805.19451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM05_ECTSI4.590e-3967.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 12..72
e-value: 2.7E-6
score: 27.5
NoneNo IPR availableGENE3D1.20.5.110coord: 4..77
e-value: 9.5E-9
score: 37.3
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 9..97
NoneNo IPR availablePANTHERPTHR21230:SF26VESICLE TRANSPORT THROUGH INTERACTION WITH T-SNARES HOMOLOG 1Bcoord: 9..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..106
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 12..70
NoneNo IPR availableTMHMMTMhelixcoord: 78..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig805contigF-serratus_M_contig805:134153..147530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig805.19451.1mRNA_F-serratus_M_contig805.19451.1Fucus serratus malemRNAF-serratus_M_contig805 134153..148239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig805.19451.1 ID=prot_F-serratus_M_contig805.19451.1|Name=mRNA_F-serratus_M_contig805.19451.1|organism=Fucus serratus male|type=polypeptide|length=107bp
MYGSTSTTSSVQSKRLIDDSLAVSNETLGIADEVIGRLYGQREALETTQT
RLGEMQGMTDDARWALRELERKSFMQKICLYSTIAILSILILLVAYREIT
NSGKLF*
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