prot_F-serratus_M_contig804.19440.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig804.19440.1
Unique Nameprot_F-serratus_M_contig804.19440.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length64
Homology
BLAST of mRNA_F-serratus_M_contig804.19440.1 vs. uniprot
Match: D7FSK9_ECTSI (Nucleolar protein 10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSK9_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 2.600e-30
Identity = 49/63 (77.78%), Postives = 57/63 (90.48%), Query Frame = 0
Query:    1 MHLMYYIKDGKRVYTLKKENQEGNLTDSAHPARFSPDDKFSAARVAIKTRFGLLPTQKPPLVL 63
            MHLMYY+++GKRVYTLKK N  GNLT+SAHPARFSPDDKFS ARVA K RFG+LPTQ+PP++L
Sbjct:    1 MHLMYYLENGKRVYTLKKANPAGNLTESAHPARFSPDDKFSGARVANKARFGVLPTQQPPIIL 63          
BLAST of mRNA_F-serratus_M_contig804.19440.1 vs. uniprot
Match: L8H2Y9_ACACA (Nucleolar protein 10 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H2Y9_ACACA)

HSP 1 Score: 99.8 bits (247), Expect = 2.480e-26
Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    1 MHLMYYI-KDGKRVYTLKKENQEGNLTDSAHPARFSPDDKFSAARVAIKTRFGLLPTQKPP 60
            MHLMYY+ KDGKRVYTLKK N EG  T SAHPARFSPDDKFS  RV +K RFG+LPTQ+PP
Sbjct:    1 MHLMYYLDKDGKRVYTLKKSNPEGTATVSAHPARFSPDDKFSRQRVTLKKRFGILPTQQPP 61          
BLAST of mRNA_F-serratus_M_contig804.19440.1 vs. uniprot
Match: A0A0G4J2C6_PLABS (Nucleolar protein 10 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J2C6_PLABS)

HSP 1 Score: 94.4 bits (233), Expect = 3.310e-24
Identity = 43/61 (70.49%), Postives = 50/61 (81.97%), Query Frame = 0
Query:    1 MHLMYYIKDGKRVYTLKKENQEGNLTDSAHPARFSPDDKFSAARVAIKTRFGLLPTQKPPL 61
            MHLMYY++DGKRVYTLKK +  G  T SAHPARFSPDDK+S  RV IK RFG+LPTQ+ P+
Sbjct:    1 MHLMYYMEDGKRVYTLKKVDPRGMPTHSAHPARFSPDDKYSRERVTIKKRFGILPTQQAPI 61          
BLAST of mRNA_F-serratus_M_contig804.19440.1 vs. uniprot
Match: K3WVP2_GLOUD (Nucleolar protein 10 n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WVP2_GLOUD)

HSP 1 Score: 91.7 bits (226), Expect = 4.080e-23
Identity = 44/60 (73.33%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    1 MHLMYYI-KDGKRVYTLKKENQEGNLTDSAHPARFSPDDKFSAARVAIKTRFGLLPTQKP 59
            MHLMYY+ +DGKRVYTLKKE+  G  T SAHPARFSPDDKFS  R+  K RFGLLPTQ P
Sbjct:    1 MHLMYYLGEDGKRVYTLKKEDPSGKPTHSAHPARFSPDDKFSKERIITKKRFGLLPTQTP 60          
BLAST of mRNA_F-serratus_M_contig804.19440.1 vs. uniprot
Match: F0WPK8_9STRA (Nucleolar protein 10 n=2 Tax=Albugo TaxID=65356 RepID=F0WPK8_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.640e-23
Identity = 45/64 (70.31%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    1 MHLMYYI-KDGKRVYTLKKENQEGNLTDSAHPARFSPDDKFSAARVAIKTRFGLLPTQKPPLVL 63
            MHLMYYI  DGKRVYTL+K + EG  T SAHPARFSPDDKFS  R+  K RFGLLPTQ P  +L
Sbjct:    1 MHLMYYIGSDGKRVYTLQKMDVEGTPTQSAHPARFSPDDKFSKERIICKKRFGLLPTQSPDTLL 64          
BLAST of mRNA_F-serratus_M_contig804.19440.1 vs. uniprot
Match: H3G7J4_PHYRM (Nucleolar protein 10 n=16 Tax=Peronosporaceae TaxID=4777 RepID=H3G7J4_PHYRM)

HSP 1 Score: 90.5 bits (223), Expect = 1.050e-22
Identity = 44/60 (73.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    1 MHLMYYI-KDGKRVYTLKKENQEGNLTDSAHPARFSPDDKFSAARVAIKTRFGLLPTQKP 59
            MHLMYY+  DGKRVYTLKKE   G+ T SAHPARFSPDDKFS  R+  K RFGLLPTQ P
Sbjct:    1 MHLMYYLGDDGKRVYTLKKETPAGSPTCSAHPARFSPDDKFSKERITTKKRFGLLPTQSP 60          
BLAST of mRNA_F-serratus_M_contig804.19440.1 vs. uniprot
Match: UPI000874AB97 (H/ACA ribonucleoprotein complex subunit 3 n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI000874AB97)

HSP 1 Score: 90.1 bits (222), Expect = 1.580e-22
Identity = 40/59 (67.80%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    1 MHLMYYIKDGKRVYTLKKENQEGNLTDSAHPARFSPDDKFSAARVAIKTRFGLLPTQKP 59
            M+LMYY+++GKRVYTLKK +  GN T+SAHPARFSP+DK+S  R+ IK+R+GLL TQKP
Sbjct:    1 MYLMYYLENGKRVYTLKKTDPWGNPTESAHPARFSPEDKYSKQRIIIKSRYGLLKTQKP 59          
BLAST of mRNA_F-serratus_M_contig804.19440.1 vs. uniprot
Match: A0A0P1B2B6_PLAHL (Nucleolar protein 10 n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1B2B6_PLAHL)

HSP 1 Score: 89.4 bits (220), Expect = 3.350e-22
Identity = 44/60 (73.33%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    1 MHLMYYI-KDGKRVYTLKKENQEGNLTDSAHPARFSPDDKFSAARVAIKTRFGLLPTQKP 59
            MHLMYY+  DGKRVYTLKKE   G  T SAHPARFSPDDKFS  R+  K RFGLLPTQ P
Sbjct:    1 MHLMYYLGDDGKRVYTLKKEGPSGAPTCSAHPARFSPDDKFSKERIITKKRFGLLPTQSP 60          
BLAST of mRNA_F-serratus_M_contig804.19440.1 vs. uniprot
Match: A0A6A3YSI7_9STRA (Nucleolar protein 10 n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YSI7_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 4.900e-22
Identity = 44/60 (73.33%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    1 MHLMYYI-KDGKRVYTLKKENQEGNLTDSAHPARFSPDDKFSAARVAIKTRFGLLPTQKP 59
            MHLMYY+  DGKRVYTLKKE   G  T SAHPARFSPDDKFS  R+  K RFGLLPTQ P
Sbjct:   28 MHLMYYLGDDGKRVYTLKKETSAGAPTCSAHPARFSPDDKFSKERITTKKRFGLLPTQSP 87          
BLAST of mRNA_F-serratus_M_contig804.19440.1 vs. uniprot
Match: A0A5B8MZ39_9CHLO (Nucleolar protein 10 n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MZ39_9CHLO)

HSP 1 Score: 88.6 bits (218), Expect = 6.430e-22
Identity = 40/60 (66.67%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    1 MHLMYYIKDGKRVYTLKKENQEGNLTDSAHPARFSPDDKFSAARVAIKTRFGLLPTQKPP 60
            M+LMYY ++GKRVYTLKK       T+SAHPARFSPDDK+S  RV  K RFG+LPTQ+PP
Sbjct:    1 MYLMYYTEEGKRVYTLKKVTPGDQPTESAHPARFSPDDKYSRERVTCKKRFGILPTQRPP 60          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig804.19440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSK9_ECTSI2.600e-3077.78Nucleolar protein 10 n=2 Tax=Ectocarpus TaxID=2879... [more]
L8H2Y9_ACACA2.480e-2677.05Nucleolar protein 10 n=1 Tax=Acanthamoeba castella... [more]
A0A0G4J2C6_PLABS3.310e-2470.49Nucleolar protein 10 n=1 Tax=Plasmodiophora brassi... [more]
K3WVP2_GLOUD4.080e-2373.33Nucleolar protein 10 n=3 Tax=Pythiaceae TaxID=4782... [more]
F0WPK8_9STRA5.640e-2370.31Nucleolar protein 10 n=2 Tax=Albugo TaxID=65356 Re... [more]
H3G7J4_PHYRM1.050e-2273.33Nucleolar protein 10 n=16 Tax=Peronosporaceae TaxI... [more]
UPI000874AB971.580e-2267.80H/ACA ribonucleoprotein complex subunit 3 n=1 Tax=... [more]
A0A0P1B2B6_PLAHL3.350e-2273.33Nucleolar protein 10 n=3 Tax=Peronosporaceae TaxID... [more]
A0A6A3YSI7_9STRA4.900e-2273.33Nucleolar protein 10 n=2 Tax=Phytophthora fragaria... [more]
A0A5B8MZ39_9CHLO6.430e-2266.67Nucleolar protein 10 n=1 Tax=Chloropicon primus Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036756H/ACA ribonucleoprotein complex, subunit Nop10 superfamilyGENE3D2.20.28.40coord: 6..56
e-value: 3.0E-8
score: 35.2
IPR036756H/ACA ribonucleoprotein complex, subunit Nop10 superfamilySUPERFAMILY144210Nop10-like SnoRNPcoord: 2..57
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PFAMPF04135Nop10pcoord: 4..51
e-value: 1.0E-18
score: 67.1
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PANTHERPTHR13305RIBOSOME BIOGENESIS PROTEIN NOP10coord: 1..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig804contigF-serratus_M_contig804:222518..231539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig804.19440.1mRNA_F-serratus_M_contig804.19440.1Fucus serratus malemRNAF-serratus_M_contig804 221943..231539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig804.19440.1 ID=prot_F-serratus_M_contig804.19440.1|Name=mRNA_F-serratus_M_contig804.19440.1|organism=Fucus serratus male|type=polypeptide|length=64bp
MHLMYYIKDGKRVYTLKKENQEGNLTDSAHPARFSPDDKFSAARVAIKTR
FGLLPTQKPPLVL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036756H/ACA_rnp_Nop10_sf
IPR007264H/ACA_rnp_Nop10