prot_F-serratus_M_contig80.19395.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig80.19395.1
Unique Name	prot_F-serratus_M_contig80.19395.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	136

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig80.19395.1 vs. uniprot
Match: A0A6H5JM54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM54_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 2.230e-37
Identity = 72/130 (55.38%), Postives = 93/130 (71.54%), Query Frame = 0

Query:    6 TWAGLSSTYWAIVAGAIVVVLLLVDRYIHWTRSLMSLICGCCSKTPPDPLAGVPDQPETVDDSGFKRNYDRDFEQGWHTVALQRDETPEDAEEAIRQREEQFRQQRLEETKKESVQIVRGVATVGGIQTE 135
            ++AGLS T WA+V G  +++LL +DR+IH TR+     C C  K PPDPL GVP+QP+  +  G+ R +DRDFE+ WH VALQRDET E+AEE +R R E  R++ LE   +E V+IVRGVATV GIQTE
Sbjct:    2 SYAGLSVTLWAVVGGVFILLLLAMDRWIHCTRNWADW-CSC-KKPPPDPLDGVPEQPDVENQEGYHREHDRDFERNWHLVALQRDETQEEAEEILRLRAEAARRRELEAASREKVKIVRGVATVRGIQTE 129

[Close]

BLAST of mRNA_F-serratus_M_contig80.19395.1 vs. uniprot
Match: D7FWH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWH8_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 5.500e-23
Identity = 50/83 (60.24%), Postives = 62/83 (74.70%), Query Frame = 0

Query:   53 DPLAGVPDQPETVDDSGFKRNYDRDFEQGWHTVALQRDETPEDAEEAIRQREEQFRQQRLEETKKESVQIVRGVATVGGIQTE 135
            DPL GVP+QP+  +  G+ R +DRDFE+ WH VALQRDET E+AEE +R R E  R++ LE   +E V+IVRGVATV GIQTE
Sbjct:   22 DPLDGVPEQPDVENQEGYHREHDRDFERNWHVVALQRDETQEEAEEILRLRAEAARRRELEAASREKVKIVRGVATVRGIQTE 104

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig80.19395.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig80.19395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JM54_9PHAE	2.230e-37	55.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FWH8_ECTSI	5.500e-23	60.24	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 34..135
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..33
None	No IPR available	TMHMM	TMhelix		coord: 7..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig80	contig	F-serratus_M_contig80:782949..805433 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig80.19395.1	mRNA_F-serratus_M_contig80.19395.1	Fucus serratus male	mRNA	F-serratus_M_contig80 782647..806765 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig80.19395.1 ID=prot_F-serratus_M_contig80.19395.1|Name=mRNA_F-serratus_M_contig80.19395.1|organism=Fucus serratus male|type=polypeptide|length=136bp
MSDETTWAGLSSTYWAIVAGAIVVVLLLVDRYIHWTRSLMSLICGCCSKT
PPDPLAGVPDQPETVDDSGFKRNYDRDFEQGWHTVALQRDETPEDAEEAI
RQREEQFRQQRLEETKKESVQIVRGVATVGGIQTE*