prot_F-serratus_M_contig80.19368.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig80.19368.1
Unique Nameprot_F-serratus_M_contig80.19368.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length313
Homology
BLAST of mRNA_F-serratus_M_contig80.19368.1 vs. uniprot
Match: A0A6H5KZ67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ67_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 1.380e-108
Identity = 176/284 (61.97%), Postives = 212/284 (74.65%), Query Frame = 0
Query:   32 STIARHVFAGAVLV-SLFGCAMASYAGAGQGNGFQSPHF-PWG-QGQSDGYNSDDLVDWGSHTQPEWDSNGMPLSPPIDGLVERPDPMGGIRALAIALEDKDRRELSRYVAMILQKLANMNELFLGERARKDTVFHSASMPSVAVAEFVERIADNIRCPNLCLMLTLVYLDCLALPSSELHLYVTPLTAHRLFAASLIIAIKFIAEKPPSALDDSFYDRMTAATGLGAAELKHLEHHMLQALAKNAYVPLGELNRYMVNFAREHHEVVPYVDQPYSGPPLLPFQ 312
            S   +HV   AVL+ SL     A   G G   G+  P   P G   Q   ++  D  DW +   P    +GMP SPPI    E+P+PM  +R+LAI+LE++DR +L  Y+A++LQKLANMNELFLGER RK +VFHSA+MPSVAVAEFVER+A+NI CPN+CLMLTLVY+D LALPSSELHLYVTPLTAHRLF ASLIIAIKFIAEKPPS  +D FY+++ + TGL  AELKHLEHHMLQALAK+AYV + ELNRYM NFA  H+E+VP++D+PYSGPP  PFQ
Sbjct:   21 SRTVQHVSKSAVLLLSLLQLTTARRPGGG---GYHYPSVTPQGYDSQDSSFDGGDWGDWRNQPIPGPKPHGMPFSPPIHRRFEQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNVCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFNDIFYEKIHSVTGLAVAELKHLEHHMLQALAKDAYVSVSELNRYMGNFAHRHNEMVPFIDRPYSGPPPFPFQ 301          
BLAST of mRNA_F-serratus_M_contig80.19368.1 vs. uniprot
Match: D8LQ63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ63_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 1.070e-67
Identity = 109/143 (76.22%), Postives = 126/143 (88.11%), Query Frame = 0
Query:  100 MPLSPPIDGLVERPDPMGGIRALAIALEDKDRRELSRYVAMILQKLANMNELFLGERARKDTVFHSASMPSVAVAEFVERIADNIRCPNLCLMLTLVYLDCLALPSSELHLYVTPLTAHRLFAASLIIAIKFIAEKPPSALDD 242
            MP SPPI    E+P+PM  +R+LAI+LE++DR +L  Y+A++LQKLANMNELFLGER RK +VFHSA+MPSVAVAEFVER+A+NI CPNLCLMLTLVY+D LALPSSELHLYVTPLTAHRLF ASLIIAIKFIAEKPPS  +D
Sbjct:    1 MPFSPPIHRRFEQPEPMDELRSLAISLEEEDRADLGGYIAVVLQKLANMNELFLGERGRKKSVFHSATMPSVAVAEFVERVANNIVCPNLCLMLTLVYMDRLALPSSELHLYVTPLTAHRLFTASLIIAIKFIAEKPPSVFND 143          
BLAST of mRNA_F-serratus_M_contig80.19368.1 vs. uniprot
Match: A0A5A7QNW8_STRAF (Cyclin family protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QNW8_STRAF)

HSP 1 Score: 66.6 bits (161), Expect = 2.270e-9
Identity = 44/158 (27.85%), Postives = 77/158 (48.73%), Query Frame = 0
Query:  136 RYVAMILQKLANMNELFLGERARKDTVFHSASMPSVAVAEFVERIADNIRCPNLCLMLTLVYLDCLALPSSELHLYVTPLTAHRLFAASLIIAIKFIAEKPPSALDDSFYDRMTAAT--GLGAAELKHLEHHMLQALAKNAYVPLGELNRYMVNFARE 291
            R+++ +LQ++A  N++F    ARK ++FH  + P++++  ++ERI     C   C ++  +YLD  A    +  + +     HRL  AS++I+ KF        +DD +Y+    A   G+  AE+  LE   L  L+    V     + Y     RE
Sbjct:   15 RFLSSLLQRVAETNDVFGSYGARKISIFHGLTRPTISIKSYLERIFKYANCSPSCYVVAYIYLDRFA--RKQPLMPINSFNVHRLLIASVLISAKF--------MDDIYYNNAYYAKVGGISTAEMNLLEVDFLFGLSFELNVSTATFHHYFGYLQRE 162          
BLAST of mRNA_F-serratus_M_contig80.19368.1 vs. uniprot
Match: A0A5A7QWF6_STRAF (Cyclin n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QWF6_STRAF)

HSP 1 Score: 66.2 bits (160), Expect = 3.740e-9
Identity = 44/167 (26.35%), Postives = 80/167 (47.90%), Query Frame = 0
Query:  127 EDKDRRELSRYVAMILQKLANMNELFLGERARKDTVFHSASMPSVAVAEFVERIADNIRCPNLCLMLTLVYLDCLALPSSELHLYVTPLTAHRLFAASLIIAIKFIAEKPPSALDDSFYDRMTAAT--GLGAAELKHLEHHMLQALAKNAYVPLGELNRYMVNFARE 291
            E+    +L  +V+++LQ++A  N+L  G RA+K +VFH  + P++++  +++RI     C   C ++  VYLD      +   L +     HRL   S++++ KF        +DD +Y+    A   G+   E+  LE   L  L  +  V     + Y  +  +E
Sbjct:    6 EESRSAKLIGFVSLLLQRVAESNDLRCGARAQKMSVFHGLTRPTISIHSYLQRIFKYANCSTSCYIVAYVYLD--RFTHTHPTLKINSFNVHRLLITSVMLSAKF--------MDDMYYNNAYYAKVGGISTREMNILEVDFLFGLGFHLNVTPSTFHSYCSHLQKE 162          
BLAST of mRNA_F-serratus_M_contig80.19368.1 vs. uniprot
Match: A0A7S4PH37_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PH37_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 2.800e-8
Identity = 40/134 (29.85%), Postives = 71/134 (52.99%), Query Frame = 0
Query:  134 LSRYVAMILQKLANMNELFLGERARKDTVFHSASMPSVAVAEFVERIADNIRCPNLCLMLTLVYLDCLALPSSELHLYVTPLTAHRLFAASLIIAIKFIAEKPPSALDDSFYDRMTAATGLGAAELKHLEHHML 267
            L  ++  +  +L  +     GE +R++T FH+   P +++ ++VER+     C   C ++ LVYL+ +   SS+   ++ P+T HRLF ASL++A K+  +      ++ FY R+    G+   EL  LE   L
Sbjct:   11 LEEFIDALTTELGELIAFGAGETSRRETKFHALRAPIISLRQYVERVTTYAPCTVECFVVALVYLNRM---SSQKLGFINPMTIHRLFLASLLLAAKYYDDLY---FNNKFYARVG---GISCKELNALELEFL 135          
BLAST of mRNA_F-serratus_M_contig80.19368.1 vs. uniprot
Match: A0A7S2W9F0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W9F0_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.980e-6
Identity = 53/174 (30.46%), Postives = 77/174 (44.25%), Query Frame = 0
Query:  116 MGGIRALAIALEDKDRRELSRYVAMILQKLANMNELFLGERARKD-----TVFHSASMPSVAVAEFVERIADNIRCPNLCLMLTLVYLDCLALPSSELHLYVTPLTAHRLFAASLIIAIKFIAEKPPSALDDSFYDRMTAATGLGAAELKHLEHHMLQALAKNAYVPLGELNRY 284
            M  +    +   D   R L + +A +L++L    E    ER RK      T FH    PS+A+ ++++RIA    C   C +L LVY+D L   + E+ L    L  HRL     ++A KF  +     LD++ Y   +A  GL   E+  LE   L  L    YV     N Y
Sbjct:    1 MAALMPYVMQERDPASRVLLQVIASVLEELVRKGE----ERRRKTNDLQMTKFHGLRAPSIALPDYLQRIAQFSGCSKECFVLMLVYIDRLV-TNKEIPL--DALNVHRLVITGTLLAAKFFDDHY---LDNAHY---SAVGGLPRNEINELELEFLFLLGFQLYVHTENYNTY 161          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig80.19368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KZ67_9PHAE1.380e-10861.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ63_ECTSI1.070e-6776.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5A7QNW8_STRAF2.270e-927.85Cyclin family protein n=1 Tax=Striga asiatica TaxI... [more]
A0A5A7QWF6_STRAF3.740e-926.35Cyclin n=1 Tax=Striga asiatica TaxID=4170 RepID=A0... [more]
A0A7S4PH37_9EUKA2.800e-829.85Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A7S2W9F0_9STRA2.980e-630.46Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 120..296
e-value: 5.1E-20
score: 74.1
NoneNo IPR availablePANTHERPTHR15615UNCHARACTERIZEDcoord: 124..284
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 38..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..53
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 49..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..312
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 156..267
e-value: 6.6E-12
score: 46.1
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 175..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig80contigF-serratus_M_contig80:226448..246262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig80.19368.1mRNA_F-serratus_M_contig80.19368.1Fucus serratus malemRNAF-serratus_M_contig80 226372..247507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig80.19368.1 ID=prot_F-serratus_M_contig80.19368.1|Name=mRNA_F-serratus_M_contig80.19368.1|organism=Fucus serratus male|type=polypeptide|length=313bp
MIMDSMSASSTAVAAQRRPRRSLEKRTCGGTSTIARHVFAGAVLVSLFGC
AMASYAGAGQGNGFQSPHFPWGQGQSDGYNSDDLVDWGSHTQPEWDSNGM
PLSPPIDGLVERPDPMGGIRALAIALEDKDRRELSRYVAMILQKLANMNE
LFLGERARKDTVFHSASMPSVAVAEFVERIADNIRCPNLCLMLTLVYLDC
LALPSSELHLYVTPLTAHRLFAASLIIAIKFIAEKPPSALDDSFYDRMTA
ATGLGAAELKHLEHHMLQALAKNAYVPLGELNRYMVNFAREHHEVVPYVD
QPYSGPPLLPFQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR036915Cyclin-like_sf