prot_F-serratus_M_contig8.19339.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig8.19339.1
Unique Nameprot_F-serratus_M_contig8.19339.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length465
Homology
BLAST of mRNA_F-serratus_M_contig8.19339.1 vs. uniprot
Match: D8LRP1_ECTSI (Letm1 RBD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP1_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 2.090e-115
Identity = 222/476 (46.64%), Postives = 283/476 (59.45%), Query Frame = 0
Query:    1 MRVGCLLVLVSIVSLPNDILGVRGWEGKEAVKSVSVARRHVFDRYGRFSQSASCSNTMAFGRS------RATKSAEQGLPSMLDSRGDVSDLEVATAEGSSGNAPDEKSQLQ---------GAVGGALNLVRDFAVHAKTGTVALWSNFQTSRDIRKRVKGGHQLTYAELRHLERGADDRRKLLQYAVIYAISPQTFPYVVLYAPSLLPSTFEKPHAVRAKYKRLALERVAATLTGLFQIERQLLDADAKLKGKPRKPEARQTRRIEALETEREDTLKILSADSKKRAFELLQGHLVAAFPPMLGERQGSGADEQMDKGKKSRKSKKENLPKACEGLPNPAAKALGSGMGLAGWRGIAPAFYARFMLNEYVKGLGKGDEVLRRQPLHSLSVSDLREACSARAIDIGDDERGGNA-QALRNSLAEWLELTSAEGVAGRRAGPGMVFLPDRARLLGLGLNFLENTRTGQRAELARKAM 460
            MR+   L ++++ ++     G  GW  K A     V+ R VF+   R  Q  S S    FGR       R T S+E G  S +D+  D S        GS   A                  A  G +N  RDF  HA+ GT ALW NF+TS+DIRKRVK GH +TYAE  HLERGA DRRKLLQY + YA+SPQ F YVV Y P LLPSTF KPH +R+KY RLALER +AT   +  +E +LL A+   KGKPR+  +RQ++++E LE +RE  L +L ADSK++ FE  Q H+V + P        + ++ +     K  K +K  LP A +G+PN   K LG G GL+GW  ++P FY R+ L+E ++ LGK D+VLR   L SLS SDLREAC ARAI++G+   G    Q LR SL EWL+LTS E  AG + GP  VFLPDRARLLGLGLN LE+ R G+ AEL RKA+
Sbjct:    1 MRLSEFLSVLNLAAVAQGGHGTAGWGSKSAAV---VSDRRVFN--DRHRQPQSRSAVAFFGRRPRTSTPRVTGSSEAG--SAVDALPDASGAGANGVRGSPAAADTSSXXXXXDSAAAPRVSAAQGIVNTFRDFWGHARDGTFALWGNFKTSQDIRKRVKAGHVMTYAEHAHLERGATDRRKLLQYLIAYAVSPQNFVYVVWYVPGLLPSTFVKPHTIRSKYHRLALERASATWDAVTGLEFRLLKAEEGFKGKPREEGSRQSKKMEKLERQREMVLDVLEADSKRQVFERFQEHMVVSAPASPDPENTAASNNKGTTKSKKPKPQKLKLPPASKGVPNAYIKTLGKGTGLSGWWHVSPGFYVRYCLSERLRDLGKMDDVLRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKSLGEWLDLTSPEVAAGSKLGPDTVFLPDRARLLGLGLNCLESARQGRTAELPRKAL 469          
BLAST of mRNA_F-serratus_M_contig8.19339.1 vs. uniprot
Match: A0A836CMC6_9STRA (LETM1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC6_9STRA)

HSP 1 Score: 156 bits (394), Expect = 6.030e-40
Identity = 113/351 (32.19%), Postives = 173/351 (49.29%), Query Frame = 0
Query:  112 ALNLVRDFAVHAKTGTVALWSNFQTSRDIRKRVK--GGHQLTYAELRHLERGADDRRKLLQYAVIYAISPQTFPYVVLYAPSLLPSTFEKPHAVRAKYKRLALERVAATLTGLFQIERQLLDADAKLKGKPRKPEARQTRRIEALETEREDTLKILSADSKKRAFELLQGHLVAAFPPMLGERQGSGADEQMDKGKKSRKSKKENLPKACEGLPNPAAKALGSGMGLAG-WRGIAPAFYARFMLNEYVKGLGKGDEVLRRQPLHSLSVSDLREACSARAIDIGD-DERGGNAQALRNSLAEWLELTSAE-GVAGRRAGPGMVFLPDRARLLGLGLNFLENTRTGQRAELAR 457
            A ++V+D     K G    W +FQ  + IR+R++  G   +TY E   L+RG +DR KLLQ  V++   P+  P+V+ + P ++PSTFE       +++     RV A L  L  ++++ L+ + K             +R+E  +  RE  ++++ A + + AF + + H  A  P               D   + R+  +   P   EG+P P AK L   +GL   W    PAF  R  L E+++ +  GD VL R PL +L   +LREA  ARA+D    DER      LR  LAEWL LT A  GV    AG   VF+P+RA+   L +N + + R  + +EL +
Sbjct:   20 AADMVKDSFRRFKAGMTGQWDSFQRCKAIRERLRAPGAAPVTYEEFMALQRGKEDRNKLLQVGVVWVAVPEAIPFVLSFLPGVIPSTFENDADRAQRFRNFNAARVRAALALLDTVDKECLNKNEK-------------KRVEFAQY-REAAVRVMKAHTCEDAFGVFEAHTFALVPA--------------DTDAQQRRRARPRPPTTVEGMPGPLAKGLAKALGLCTPWM---PAFLCRGPLREHLRKVAAGDAVLARTPLDALRGRELREAACARALDAAHPDERE-----LRRRLAEWLRLTGAPLGVDDCDAGAERVFVPERAKAAMLAVNVVASARAARESELPK 334          
BLAST of mRNA_F-serratus_M_contig8.19339.1 vs. uniprot
Match: A0A6H5L818_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L818_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 5.450e-19
Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 0
Query:  322 LPNPAAKALGSGMGLAGWRGIAPAFYARFMLNEYVKGLGKGDEVLRRQPLHSLSVSDLREACSARAIDIGDDERGGNA-QALRNSLAEWLELTSAEGVAGRRAGP 425
            +PN   +ALG G GL+GW  I+P FY R+ L+E ++ LG+  E+LR   L SLS SDLREAC ARAI++G+   G    Q LR  L  WL+LTS E  AG +  P
Sbjct:   63 VPNAYIEALGKGTGLSGWCHISPGFYVRYCLSERLRDLGRMIEILRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKPLGGWLDLTSPEVSAGSKLDP 167          
BLAST of mRNA_F-serratus_M_contig8.19339.1 vs. uniprot
Match: B7FW20_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FW20_PHATC)

HSP 1 Score: 67.0 bits (162), Expect = 3.190e-8
Identity = 90/316 (28.48%), Postives = 140/316 (44.30%), Query Frame = 0
Query:  150 LTYAELRHLERGADDRRKLLQYAVIYAISPQTFPYVVLYAPSLLPSTFEKPHAVRAKYKRLALERVAATLTGLFQIERQLLDADAKLK-----GKPRKPEARQTRRIEALETEREDTLKILSADSKKRAFELLQGHLVAA-FPPMLGERQGSGADEQM-DKGKKSRKSKKENLPKACEGLPNPAAKALGSGMGLAGW-RGIAPAFYARFMLNEYVKGLGKGDEVLRRQPLHSLSVSD--LREACSARAIDIGDDERGGNAQA----LRNSLAEWLELTSAEGVAGRRAGPGMVFLPDRARLLGLGLNFLENTRTGQ 451
            + Y E   L++G +DR KL+    +   +P+  PY +++ P +LPS F  P       K+ + +R  A L  L Q+E+Q     A  K     GK      +Q  ++ A+ T  E     L + S        QGH  A+     +G       DE   D+G  SRK+K+      C+ +P    K LGS +G AG+   ++P F  R  +  +VK +   D  L +  +   ++S   L+EACS R I        GNA +    L++ L+ WL L   E          M F  + AR   +G + L+ TR G+
Sbjct:  142 IEYEEYMFLQKGKEDRGKLMNVVFLMWGAPRFLPYALMFNPEMLPSPFLSPGPESVLEKK-SRQRSTAVLECLLQLEQQAKAVPALSKLNIFGGK------KQQVKMNAMHTFNERVASFLISSS-------CQGHEGASRVLQEIGAYLYLPVDEDAPDRGDFSRKAKR-----LCD-VPPTVIKGLGSAIGNAGFFASVSPNFLNRGKILGHVKKIADADHFLVQANIDLTTISWRLLQEACSDRLI--------GNAASTPDELQSMLSSWLRLVVYEPAK----HDSMHFNSNLARTSLMGYHALQATRDGR 425          
BLAST of mRNA_F-serratus_M_contig8.19339.1 vs. uniprot
Match: A0A433D1P3_9FUNG (LETM1-like protein-domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D1P3_9FUNG)

HSP 1 Score: 61.2 bits (147), Expect = 1.410e-6
Identity = 29/80 (36.25%), Postives = 49/80 (61.25%), Query Frame = 0
Query:  117 RDFAVHAKTGTVALWSNFQTSRDIRKRVKGGHQLTYAELRHLERGADDRRKLLQYAVIYAISPQTFPYVVLYAPSLLPST 196
            ++ AV  K G   LW N + ++++R+  + G++L   E + +     D RKL+ + VI AI P+  P++V +APSL+PST
Sbjct:  100 KELAVFYKNGVKLLWGNRKKAKELREAQRQGYKLNRKEFQLVHTTKKDMRKLIPFVVILAILPELIPFIVAFAPSLVPST 179          
BLAST of mRNA_F-serratus_M_contig8.19339.1 vs. uniprot
Match: A0A1Y1Z8X8_9FUNG (LETM1-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z8X8_9FUNG)

HSP 1 Score: 58.5 bits (140), Expect = 1.000e-5
Identity = 31/115 (26.96%), Postives = 62/115 (53.91%), Query Frame = 0
Query:  112 ALNLVRDFAVHAKTGTVALWSNFQTSRDIRKRVKGGHQLTYAELRHLERGADDRRKLLQYAVIYAISPQTFPYVVLYAPSLLPSTFEKPHAVRAKYKRLALERVAATLTGLFQIE 226
            A+   ++  V  K G    +SN + ++ ++K+   G +LT  E + + R   D RKL+ +A +  + P+  P+++++APS++PST      +  K K++  +R A   + L  +E
Sbjct:   83 AMERFKELLVFYKNGIKQTFSNKKMAKGLKKKQAAGQELTRKEYQLISRAFADSRKLVPFAFLLVLFPEAIPFILVFAPSVVPSTCITEKQMENKIKKVNEKRQAIVQSVLDSLE 197          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LRP1_ECTSI2.090e-11546.64Letm1 RBD domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CMC6_9STRA6.030e-4032.19LETM1 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6H5L818_9PHAE5.450e-1949.52LETM1 domain-containing protein n=1 Tax=Ectocarpus... [more]
B7FW20_PHATC3.190e-828.48Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A433D1P3_9FUNG1.410e-636.25LETM1-like protein-domain-containing protein n=1 T... [more]
A0A1Y1Z8X8_9FUNG1.000e-526.96LETM1-domain-containing protein n=1 Tax=Basidiobol... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011685LETM1-likePFAMPF07766LETM1coord: 117..214
e-value: 3.4E-10
score: 39.7
coord: 323..417
e-value: 4.6E-9
score: 36.0
NoneNo IPR availablePANTHERPTHR14009LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEINcoord: 116..418
NoneNo IPR availablePANTHERPTHR14009:SF1MITOCHONDRIAL PROTON/CALCIUM EXCHANGER PROTEINcoord: 116..418
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..464
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.685
IPR033122Letm1 ribosome-binding domainPROSITEPS51758LETM1_RBDcoord: 244..464
score: 10.395

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8contigF-serratus_M_contig8:1119862..1123021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8.19339.1mRNA_F-serratus_M_contig8.19339.1Fucus serratus malemRNAF-serratus_M_contig8 1119085..1123053 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig8.19339.1 ID=prot_F-serratus_M_contig8.19339.1|Name=mRNA_F-serratus_M_contig8.19339.1|organism=Fucus serratus male|type=polypeptide|length=465bp
MRVGCLLVLVSIVSLPNDILGVRGWEGKEAVKSVSVARRHVFDRYGRFSQ
SASCSNTMAFGRSRATKSAEQGLPSMLDSRGDVSDLEVATAEGSSGNAPD
EKSQLQGAVGGALNLVRDFAVHAKTGTVALWSNFQTSRDIRKRVKGGHQL
TYAELRHLERGADDRRKLLQYAVIYAISPQTFPYVVLYAPSLLPSTFEKP
HAVRAKYKRLALERVAATLTGLFQIERQLLDADAKLKGKPRKPEARQTRR
IEALETEREDTLKILSADSKKRAFELLQGHLVAAFPPMLGERQGSGADEQ
MDKGKKSRKSKKENLPKACEGLPNPAAKALGSGMGLAGWRGIAPAFYARF
MLNEYVKGLGKGDEVLRRQPLHSLSVSDLREACSARAIDIGDDERGGNAQ
ALRNSLAEWLELTSAEGVAGRRAGPGMVFLPDRARLLGLGLNFLENTRTG
QRAELARKAMLRSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011685LETM1
IPR033122LETM1_RBD