prot_F-serratus_M_contig8.19331.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig8.19331.1
Unique Nameprot_F-serratus_M_contig8.19331.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length617
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 614..616
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 277..396
coord: 364..487
coord: 141..286
coord: 482..588
coord: 200..346
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 495..554
e-value: 3.3E-9
score: 36.7
coord: 425..484
e-value: 7.8E-12
score: 45.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 337..365
e-value: 0.013
score: 15.7
coord: 234..262
e-value: 1.5E-4
score: 21.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 265..312
e-value: 4.5E-10
score: 39.6
coord: 367..413
e-value: 2.0E-10
score: 40.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 311..336
e-value: 9.1E-5
score: 20.4
coord: 233..267
e-value: 9.6E-7
score: 26.6
coord: 337..369
e-value: 3.4E-4
score: 18.6
coord: 268..301
e-value: 4.1E-7
score: 27.8
coord: 476..509
e-value: 0.0025
score: 15.8
coord: 511..543
e-value: 2.5E-6
score: 25.3
coord: 440..474
e-value: 8.6E-7
score: 26.7
coord: 370..404
e-value: 2.8E-8
score: 31.5
coord: 405..439
e-value: 5.3E-6
score: 24.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 266..300
score: 12.233
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 196..230
score: 6.16
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 335..367
score: 7.815
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 473..507
score: 10.238
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 161..195
score: 7.991
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 508..542
score: 12.364
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 301..334
score: 8.429
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 368..402
score: 12.299
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 438..472
score: 11.663
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 231..265
score: 11.509
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 403..437
score: 11.696
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 543..577
score: 8.638
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 314..414
e-value: 4.3E-32
score: 112.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 162..313
e-value: 1.2E-37
score: 131.9
coord: 424..595
e-value: 4.9E-43
score: 149.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 206..330

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8contigF-serratus_M_contig8:912593..914443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8.19331.1mRNA_F-serratus_M_contig8.19331.1Fucus serratus malemRNAF-serratus_M_contig8 911152..914578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig8.19331.1 ID=prot_F-serratus_M_contig8.19331.1|Name=mRNA_F-serratus_M_contig8.19331.1|organism=Fucus serratus male|type=polypeptide|length=617bp
MKDWYKYVPNMLPGSERVPLLTPSFGLAPVFLASRSVSGPICKSASCLRG
RDVDVLCSSTAGDDRLSAAAAARARVLQQQNIIADRRVKRSKEQKQRRQQ
QESRTKGHRDSLGNGLKDALYSQSRAIGDKIKRMRTNDWEGVLRELKHAE
RTLELEGFRVTLRIYATSIRHLAKCRRWREAVGVLHGIRAAGRSPNSDCL
SAAIDACRYARQWEQAVSLLRQERKIGTGVDAFCYSSAIAACGNAGQWEL
AVSLLREMEASGTPPNVVTFNSAITACGNAGRWREAVSLLREMESLQIKP
SPISFNSAIAACHAGHWQEALSLMREMVAKGYSPDVVTYNSAITACGGRW
EEAVSLLGEMEVEGITPDVISYSAAIKACGKGGQPEEAVSLLREMVTRDI
RPNVVTFNSAITAVGEAGQWEESVSLLREMDAEGITPDVISYSAAITACG
NGGQPSRALALLREMEARGISPNVISYSASIAACRNGGWPTEAVSLLREM
ATKGVSPNETTFNSAITAVGDTGRWQEAMSLFREMETSGISPSQISFNSA
IEACAIGGQSGLAVSLLEEMASKGIARDIVSYHLTIKAHDVCINDTPPSL
RSNCLETMSFSGRCNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf