prot_F-serratus_M_contig8.19318.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig8.19318.1
Unique Name	prot_F-serratus_M_contig8.19318.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	329

Homology

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BLAST of mRNA_F-serratus_M_contig8.19318.1 vs. uniprot
Match: D8LRK7_ECTSI (YqgFc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK7_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 1.150e-87
Identity = 155/259 (59.85%), Postives = 186/259 (71.81%), Query Frame = 0

Query:   88 IHPSVTWLYQ---SSRTPIR-------ETSSRPARRTLAVDYGSHRVGLAIGVGISPRMVPGITNRGTDLDLVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPASVYLWDERFSSAQAGALLDRHGGGMGRKVEIDSLAASLVLEHYFSAGGRYKAEKVEPRTA--TAEIMFAAGRTGQQLAENTDDESLIV-------QGPKRRLYRKRMESLRNTVAEEFVPMVPPRKSKRKRRKR 327
            +HPSV+WLY    SS T ++       ET +RP+RRTL VDYG+ RVGLAIGVGISPR VPG+TN G+DL++ RQVL+RARGEGIRDIVVGLPL RNGTETEMC++VRGFAS+LAD GAASR  A V+LWDERFSSAQA A+LD +GGGM  KVEIDSLAASL+L+H+F  GG   AEKV+P T   TAE+  AAGR G+   E  +DES          +G +RR    R ES R+  A E       R++ RKRR+R
Sbjct:   44 VHPSVSWLYPPKPSSTTAVKTTDTRSQETKTRPSRRTLCVDYGTRRVGLAIGVGISPRAVPGVTNVGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETEMCEIVRGFASVLADVGAASRPTAGVFLWDERFSSAQAAAMLDPYGGGMSSKVEIDSLAASLILKHFFEEGGTNNAEKVKPSTGVVTAEVWRAAGRDGE---EGEEDESXXXXXEDAYGEGSRRRFQEMREESARSAAAGEDSAR---RRAWRKRRRR 296

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BLAST of mRNA_F-serratus_M_contig8.19318.1 vs. uniprot
Match: A0A7S4D691_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D691_HETAK)

HSP 1 Score: 102 bits (253), Expect = 1.600e-21
Identity = 67/166 (40.36%), Postives = 96/166 (57.83%), Query Frame = 0

Query:   99 SRTPIRETSSRPARRTLAVDYGSHRVGLAIGVG-ISPRMVPGITNRGTDLDLVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPASVYLWDERFSSAQAGALLDRHGGGMGRKVE--IDSLAASLVLEHYFSAGGRYKAEKVEPRT 261
            S+  +    S  + R L VDYG+ RVG+AI  G I+PR V  I N G D  ++R++   AR E I   VVG+PL R+G ET    + R F+  LAD   + R P  VY+W+E FSS  A +LL     G   +++  +D++AA ++LE YFS  G + AE + PR+
Sbjct:   60 SKIRMEMKPSLSSERVLGVDYGTKRVGIAISAGGIAPRPVKIIQNSGDDSQVIREIKFMARAEQISSFVVGVPLQRDGAETNQSIINRNFSQTLADE-VSPRVP--VYVWNEAFSSVAAESLLLHKSRG---EIDACLDAVAACMILEDYFSEDG-WGAELIPPRS 218

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BLAST of mRNA_F-serratus_M_contig8.19318.1 vs. uniprot
Match: A0A7S3X7E5_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X7E5_EMIHU)

HSP 1 Score: 95.9 bits (237), Expect = 8.960e-20
Identity = 62/155 (40.00%), Postives = 85/155 (54.84%), Query Frame = 0

Query:  110 PAR----RTLAVDYGSHRVGLAIGVGISPRMVPGITNRGTDLDLVRQVLIRA-RGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPASVYLWDERFSSAQAGALLDRHGGGMGRKVEIDSLAASLVLEHYFSAGGRYKAEKVEP 259
            PAR    RTL VD+G  R GLA+  GI+P  +  I ++  +L  V   ++RA R EG   +V+G+P   +G E E     R F  +LA   A    P  VYLWDERFSSA+A ++    G G  R   ID +AA+++LE +F  G    AE + P
Sbjct:   55 PARGFGTRTLGVDFGLRRTGLAVSAGIAPLPIGIIDDQSANLTAVAAQVVRAARSEGASQLVLGMPYNSSGGEGEQAVATRRFGELLAREAA----PRPVYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFFE-GDFASAELIAP 203

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BLAST of mRNA_F-serratus_M_contig8.19318.1 vs. uniprot
Match: R1ED05_EMIHU (YqgFc domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ED05_EMIHU)

HSP 1 Score: 94.7 bits (234), Expect = 2.780e-19
Identity = 58/142 (40.85%), Postives = 80/142 (56.34%), Query Frame = 0

Query:  110 PAR----RTLAVDYGSHRVGLAIGVGISPRMVPGITNRGTDLDLVRQVLIRA-RGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPASVYLWDERFSSAQAGALLDRHGGGMGRKVEIDSLAASLVLEHYF 246
            PAR    RTL VD+G  R GLA+  GI+P  +  I ++  +L  V   ++RA R EG   +V+G+P   +G E E     R F  +LA   A    P  VYLWDERFSSA+A ++    G G  R   ID +AA+++LE +F
Sbjct:   19 PARGFGTRTLGVDFGLRRTGLAVSAGIAPLPIGIIDDQSANLTAVAAQVVRAARSEGASQLVLGMPYNSSGGEGEQAVATRRFGELLAREAA----PRPVYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFF 155

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BLAST of mRNA_F-serratus_M_contig8.19318.1 vs. uniprot
Match: A0A7S1CZC8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZC8_CYCTE)

HSP 1 Score: 89.0 bits (219), Expect = 4.470e-17
Identity = 68/209 (32.54%), Postives = 102/209 (48.80%), Query Frame = 0

Query:  103 IRETSSRPARRTLAVDYGSHRVGLAIGVGISPRMVPGITNRGTDL-DLVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSP-ASVYLWDERFSSAQAGALLDRHGGGMGRKVEIDSLAASLVLEHYFSAGGRYKAEKVEPRTATAEIMFAAGRTGQQLAENTDDESLIVQGPKRRLYRKRMESLRNTVAE 309
            IRE S     ++L VDYG  R GLA+  G S +  P +T R  +  DL  Q+      E    ++VGLPL  NGTE +   + R F+  LA++  AS  P   VYL+DER++S +A A +      +     +D+ AA ++LE Y+   G+  AE V      AE+  A  +T  + AE     +L+      +  ++ M  LR    E
Sbjct:    5 IRELSPLMGTKSLGVDYGLSRTGLAVSRGYSSQ--PLLTLRSNNATDLAIQITRYCVSEQASQVIVGLPLHMNGTENDQTILTRVFSQRLAESILASMGPKVPVYLFDERYTSKEAAARMHNRDPSLALYGTLDADAACIILEGYYGDNGK-GAELVTLPANIAEVAMAKYKTKTEKAEQARKAALLEWQTATKRRKEEMARLRKEAKE 210

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BLAST of mRNA_F-serratus_M_contig8.19318.1 vs. uniprot
Match: A0A8J2T1I1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1I1_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 6.530e-17
Identity = 58/141 (41.13%), Postives = 81/141 (57.45%), Query Frame = 0

Query:  109 RPARRTLAVDYGSHRVGLAIGVGISPRMVPGITNRGTDLD-LVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPASVYLWDERFSSAQAGALLDRHGGGMGRKVEIDSLAASLVLEHYFSA 248
            R A  TL VDYG  RVG+ +GVG + R +  +     D+D +V ++L  AR E I  IVVGLPL ++G E   C   R FA  LA A  A+     + LWDERFSS +A ALL    G       +D++AA ++L+ +F++
Sbjct:   73 RIAPPTLGVDYGLRRVGVCVGVGFASRPLE-VIEHDEDIDAVVARLLQIARRERIASIVVGLPLEKDGAEGLQCAATRRFADALAAAAPAT----PLVLWDERFSSREAEALLAHRPGAA-----LDAVAACVILDDFFAS 203

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BLAST of mRNA_F-serratus_M_contig8.19318.1 vs. uniprot
Match: A0A7S2ZDD4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDD4_9RHOD)

HSP 1 Score: 87.0 bits (214), Expect = 1.710e-16
Identity = 77/222 (34.68%), Postives = 106/222 (47.75%), Query Frame = 0

Query:  112 RRTLAVDYGSHRVGLAIGVGISPRMVPGITNRGTDLDLVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPASVYLWDERFSSAQAGALLDRHGGGMGRKVE--IDSLAASLVLEHYFSAGGRYKAEKVEPRTATAEIMFAAGRTG------QQLAENTDDESLIVQGPKRRLYRKRMESLRNTVAEEFVPMVPPRKSKRKRR 325
            ++TLAVDYG  RVGLA+ VGI+PR +  I NRG   ++ R++   AR E +  +VVGLPL   G E E     R F   L  A         +YLWDERFS+  A   L         +VE  +DS AA  +LE +F   G             AE+++  GR G      QQ+++N D       GP  R ++   + L     E   P    RK K+++R
Sbjct:   22 KKTLAVDYGLRRVGLALSVGIAPRRLNKIYNRGNLGEVARRISDVARREMVLQVVVGLPLNSKGDEGEQAAATRKFCEYLRIA----LPEPPIYLWDERFSTQTARNRL-MSSKTYRNQVENFVDSEAAVAILEDFFENSGD-----------DAELLYP-GRGGLDYGKPQQVSDNGD-------GP--RSFKAWKQGLIQMSDEGRNPRSQERKKKKRKR 217

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BLAST of mRNA_F-serratus_M_contig8.19318.1 vs. uniprot
Match: A0A7S4J4M8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4M8_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.530e-15
Identity = 60/157 (38.22%), Postives = 87/157 (55.41%), Query Frame = 0

Query:  103 IRETSSRPARRTLAVDYGSHRVGLAIGVGISPRMVPGITNRGTDLDLVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPA-SVYLWDERFSS----AQAGALLDRHGGGMGRKVEI----DSLAASLVLEHYFSAGG 250
            +  +SS    +++ VD+G  R GLA+ +G SP  +  I +   +  LV +V+  A  EG    VVGLPL +NGTE+E   + R FAS LA        P   V +WDER+SS    A+A A   R GG    ++++    D+ AA L+LEHY++ GG
Sbjct:  183 VASSSSLLGIKSIGVDFGLARTGLAVTIGYSPHPL-AIASGMNETALVGEVMRLAESEGATRAVVGLPLHKNGTESERSGLTRTFASKLAAGAYGHFGPRFRVDMWDERYSSKMAAAKAVAASRRRGGEDPGRMDLYGSLDADAACLILEHYYAEGG 338

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BLAST of mRNA_F-serratus_M_contig8.19318.1 vs. uniprot
Match: A0A838RI18_9CHLR (Putative pre-16S rRNA nuclease n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RI18_9CHLR)

HSP 1 Score: 80.1 bits (196), Expect = 1.230e-14
Identity = 55/148 (37.16%), Postives = 82/148 (55.41%), Query Frame = 0

Query:  114 TLAVDYGSHRVGLAIGVGISPRMVPGITNRGTDLDLVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPASVYLWDERFSSAQAGA-LLDRHGGGMGRKVEIDSLAASLVLEHYFSAGGRYKAEKVEPR 260
            TLA+DYGS RVG A+ VG   R +  +   G+   L+ ++L     E +  IVVGLPL  +GTE E   VVRGFA+ LA       +   ++LW+E  SS  A A ++        R+ ++D++AA+L L+ +    G   AE+V P+
Sbjct:    4 TLAIDYGSARVGTAVSVGWMARPLD-VFPHGSIESLLARLLALCTQEQVTKIVVGLPLNADGTEGEQATVVRGFATELAQT-----TNLEIFLWNEYGSSQAAQAQMIGASRSRKARREKLDAIAAALFLQEFVEQNG-VGAERVYPK 144

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BLAST of mRNA_F-serratus_M_contig8.19318.1 vs. uniprot
Match: A0A7S3F3A2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F3A2_9EUKA)

HSP 1 Score: 80.9 bits (198), Expect = 1.600e-14
Identity = 60/160 (37.50%), Postives = 85/160 (53.12%), Query Frame = 0

Query:  125 GLAIGVGISPRMVPGITNRGTDLD---LVRQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRSPASVYLWDERFSSAQAGALLDRHGGGMGRKVEIDSLAASLVLEHYFSAGGRYKAEKVEPRTATAEIMFAAGRTGQQLAENT 281
            G+A+  G SP  +  ++  G+  D   +  Q+   A GEG   IV+GLPL  +G E E   V R FAS LA    AS+ P  V+LWDERFSSA+A   ++  G G      ID++AA+++LE +F+              ATAE + A GR  ++ A  T
Sbjct:    1 GVALSSGFSPIPLTVVSCNGSKEDFPQVASQICRIALGEGASQIVLGLPLNSSGGEGEQAVVTREFASSLA---CASQLP--VFLWDERFSSAEASMRMNS-GRGASAGQTIDAVAAAIILEEFFAG-----------EWATAESICAPGRPAEERAPTT 143

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig8.19318.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig8.19318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LRK7_ECTSI	1.150e-87	59.85	YqgFc domain-containing protein n=2 Tax=Ectocarpus...	[more]
A0A7S4D691_HETAK	1.600e-21	40.36	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S3X7E5_EMIHU	8.960e-20	40.00	Hypothetical protein (Fragment) n=1 Tax=Emiliania ...	[more]
R1ED05_EMIHU	2.780e-19	40.85	YqgFc domain-containing protein n=2 Tax=Emiliania ...	[more]
A0A7S1CZC8_CYCTE	4.470e-17	32.54	Hypothetical protein n=1 Tax=Cyclophora tenuis Tax...	[more]
A0A8J2T1I1_9STRA	6.530e-17	41.13	Hypothetical protein n=2 Tax=Pelagomonas calceolat...	[more]
A0A7S2ZDD4_9RHOD	1.710e-16	34.68	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
A0A7S4J4M8_9STRA	1.530e-15	38.22	Hypothetical protein n=2 Tax=Odontella aurita TaxI...	[more]
A0A838RI18_9CHLR	1.230e-14	37.16	Putative pre-16S rRNA nuclease n=1 Tax=Ardenticate...	[more]
A0A7S3F3A2_9EUKA	1.600e-14	37.50	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006641	YqgF/RNase H-like domain	SMART	SM00732	rnase_8s	coord: 112..216 e-value: 7.7E-10 score: 48.7
IPR005227	Putative pre-16S rRNA nuclease	PFAM	PF03652	RuvX	coord: 113..247 e-value: 9.7E-23 score: 81.1
IPR005227	Putative pre-16S rRNA nuclease	TIGRFAM	TIGR00250	TIGR00250	coord: 115..246 e-value: 6.9E-13 score: 46.8
IPR005227	Putative pre-16S rRNA nuclease	PANTHER	PTHR33317	FAMILY NOT NAMED	coord: 90..258
IPR005227	Putative pre-16S rRNA nuclease	HAMAP	MF_00651	Nuclease_YqgF	coord: 112..250 score: 16.471
IPR037027	YqgF/RNase H-like domain superfamily	GENE3D	3.30.420.140		coord: 111..249 e-value: 3.4E-23 score: 84.2
None	No IPR available	PANTHER	PTHR33317:SF1	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN	coord: 90..258
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 27..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 16..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 35..328
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..15
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..26 score: 0.744
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 112..247

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig8	contig	F-serratus_M_contig8:792743..803715 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig8.19318.1	mRNA_F-serratus_M_contig8.19318.1	Fucus serratus male	mRNA	F-serratus_M_contig8 792352..803756 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig8.19318.1 ID=prot_F-serratus_M_contig8.19318.1|Name=mRNA_F-serratus_M_contig8.19318.1|organism=Fucus serratus male|type=polypeptide|length=329bp
MVRSKRSPRSLWKAKLLLCLWAIVCPMDPPCATGNAFIVSTTVRGVMLKA
NTFYTNCRRTCCLEDDSQRTTVEETAGAVEEDDDEDSIHPSVTWLYQSSR
TPIRETSSRPARRTLAVDYGSHRVGLAIGVGISPRMVPGITNRGTDLDLV
RQVLIRARGEGIRDIVVGLPLIRNGTETEMCKVVRGFASILADAGAASRS
PASVYLWDERFSSAQAGALLDRHGGGMGRKVEIDSLAASLVLEHYFSAGG
RYKAEKVEPRTATAEIMFAAGRTGQQLAENTDDESLIVQGPKRRLYRKRM
ESLRNTVAEEFVPMVPPRKSKRKRRKRD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006641	YqgF/RNaseH-like_dom
IPR005227	YqgF
IPR037027	YqgF/RNaseH-like_dom_sf
IPR012337	RNaseH-like_sf