prot_F-serratus_M_contig8.19316.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig8.19316.1
Unique Nameprot_F-serratus_M_contig8.19316.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length169
Homology
BLAST of mRNA_F-serratus_M_contig8.19316.1 vs. uniprot
Match: D8LRK4_ECTSI (ER membrane protein complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK4_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 1.260e-86
Identity = 128/166 (77.11%), Postives = 143/166 (86.14%), Query Frame = 0
Query:    3 PARMWRFDLNQGPGEGTKDLARPLGFNPGALIEDDDTSGPSAVAQANLKRKRAMEIATGPGKSLLMNCFMMYMSGGSINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFLGVCAALWKMAKMGLLPVTAADWTSYLMPKNVIEYSGVPL 168
            P R WRFDLN GPGE  K LARPLGFNPGALI+DDD +GPSA+AQ NLK+KRAMEIA GPGKS+LMN FMMYMSG  I++ SIMITFMGIMNP KAI+++   FR+VDDGK SLLLPKLI+ A+NF GVC ALWKMAKMGLLPVTAADWTSYL+PK+ IE SGVPL
Sbjct:    4 PERTWRFDLNPGPGEAPKSLARPLGFNPGALIDDDDATGPSALAQENLKKKRAMEIALGPGKSILMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAILSVHSVFRTVDDGKISLLLPKLIFCAVNFGGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEQSGVPL 169          
BLAST of mRNA_F-serratus_M_contig8.19316.1 vs. uniprot
Match: A0A7S2FYU7_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYU7_9STRA)

HSP 1 Score: 163 bits (412), Expect = 3.190e-48
Identity = 89/170 (52.35%), Postives = 110/170 (64.71%), Query Frame = 0
Query:    3 PARMWRFDLNQGPGEGTKDLAR----PLGFNPGALIEDDDTSGPSAVAQANLKRKRAMEIATGPGKSLLMNCFMMYMSGGSINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFLGVCAALWKMAKMGLLPVTAADWTSYLMPKNVIEYSGVPL 168
            P   WRFDL   P E    + R    PLG++PGA IE+ +T      + +  K   AM IATGPGK ++MN FMMYMSG  IN+ SIMIT MG+ NP+ AIVN+   F  VDDG +   +PKLI+ ALN L +C ALWK   MGLLPVT+ADWTSYL+ K   E SG+P+
Sbjct:    7 PDGAWRFDLV--PTEADHKILRECEGPLGYDPGA-IEEKETEEKKQGSLSKRKAAMAMNIATGPGKQIMMNGFMMYMSGSQINIFSIMITAMGLWNPINAIVNVNKAFVKVDDGSHDCTMPKLIFCALNLLSLCVALWKCKAMGLLPVTSADWTSYLIEKTNDEMSGIPI 173          
BLAST of mRNA_F-serratus_M_contig8.19316.1 vs. uniprot
Match: A0A6H5JF63_9PHAE (ER membrane protein complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF63_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 1.290e-44
Identity = 87/150 (58.00%), Postives = 99/150 (66.00%), Query Frame = 0
Query:   56 MEIATGPGKSLLMNCFMMYMSGGSINMISIMITFMGIMNPVKAIVNI----------------------------------PGT---FRSVDDGKNSLLLPKLIYSALNFLGVCAALWKMAKMGLLPVTAADWTSYLMPKNVIEYSGVPL 168
            MEIA GPGK++LMN FMMYMSG  I++ SIMITFMGIMNP KAI+ +                                  P T   FR+VDDGK SLL+PKL++ ALNF GVC ALWKMAKMGLLPVTAADWTSYL+PK+ IE SGVPL
Sbjct:    1 MEIALGPGKTILMNGFMMYMSGAGIHIFSIMITFMGIMNPAKAILGVHNGMPSSTILRTIPAMPTAHAPAQPAMSSPCPRFPQTYAVFRTVDDGKISLLMPKLLFCALNFGGVCVALWKMAKMGLLPVTAADWTSYLVPKHAIEQSGVPL 150          
BLAST of mRNA_F-serratus_M_contig8.19316.1 vs. uniprot
Match: A0A7S2DUV1_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUV1_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.000e-43
Identity = 80/166 (48.19%), Postives = 104/166 (62.65%), Query Frame = 0
Query:    5 RMWRFDLNQGPGEGT--KDLARPLGFNPGALIEDDDTSGPSAVAQANLKRKRAMEIATGPGKSLLMNCFMMYMSGGSINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFLGVCAALWKMAKMGLLPVTAADWTSYLMPKNVIEYSGVPL 168
            + W  DL   P E    ++   PLGF+  AL+E D  +G        LK K AM+IAT PGK++LMN FMMYM+G  IN+ SIM+  M + NP+ AI  I   F  VDDG   L++PKLI+  LN L +C  LWK  +MGLLP+T+ADWTSYL+ K  +  SGVP+
Sbjct:    7 KRWTVDLVPNPSEHAIIREAVNPLGFDLNALVEVD-AAGKKEKDLKGLKTKMAMDIATAPGKNILMNGFMMYMTGSYINIFSIMMLSMSLWNPLNAIAGINKAFTKVDDGTVDLIMPKLIFFCLNVLSLCVGLWKCGRMGLLPITSADWTSYLLTKVDVSSSGVPI 171          
BLAST of mRNA_F-serratus_M_contig8.19316.1 vs. uniprot
Match: A0A7S2SV60_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV60_9STRA)

HSP 1 Score: 147 bits (370), Expect = 8.520e-42
Identity = 80/165 (48.48%), Postives = 104/165 (63.03%), Query Frame = 0
Query:    5 RMWRFDLNQGPG--EGTKDLARPLGFNPGALIEDDDTSGPSAVAQANLKRKRAMEIATGPGKSLLMNCFMMYMSGGSINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFLGVCAALWKMAKMGLLPVTAADWTSYLMPKNVIEYSGVP 167
            R W F L++G    E  K +  PLG+    + + D ++   A  +A LK K A  +AT PGK +LMN FMMYMSG  IN+ SIMIT MGI  P+ AI  I   FR V+DG   L +PKLI+ ALN L +  A+WK   MGLLP+TAADWT YL+ K ++E +G+P
Sbjct:   13 RAWAFHLSRGGNDHELAKRIEAPLGYVVNYVPDKDVSTKTKADNRAALKSKIAFNMATAPGKQILMNGFMMYMSGSQINIFSIMITTMGIWTPINAIAGINKHFRRVEDGNVDLTMPKLIFFALNILSLGVAMWKCKAMGLLPITAADWTGYLVDKEMLEVTGIP 177          
BLAST of mRNA_F-serratus_M_contig8.19316.1 vs. uniprot
Match: A0A5D6XRF1_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRF1_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.670e-35
Identity = 74/161 (45.96%), Postives = 97/161 (60.25%), Query Frame = 0
Query:    7 WRFDLNQGPGEGTKDLARPLGFNPGALIEDDDTSGPSAVAQ--ANLKRKRAMEIATGPGKSLLMNCFMMYMSGGSINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFLGVCAALWKMAKMGLLPVTAADWTSYLMPKNVIEYSG 165
            WR +LN+           P+GF  G + E ++ S  +  A    +LK+KRAMEI   P KSL+   FMM+MSG S+N+ SIM+T M IMN  K+++N+ G F SV+DG   L+ PKL+Y A N   V  A++K A MGLLP TAADWT  L  K  IE S 
Sbjct:   15 WRVELNEARESDLPSRLEPIGFTRGFVAEKENNSAVAKTASNTLDLKKKRAMEIGMAPFKSLMQTGFMMWMSGSSVNIFSIMVTGMIIMNTFKSLLNLQGAFVSVNDGVVDLVQPKLVYVAGNLANVAMAVYKCANMGLLPTTAADWTWLLPIKQAIETSA 175          
BLAST of mRNA_F-serratus_M_contig8.19316.1 vs. uniprot
Match: K3WTT5_GLOUD (ER membrane protein complex subunit 4 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTT5_GLOUD)

HSP 1 Score: 127 bits (318), Expect = 4.580e-34
Identity = 77/164 (46.95%), Postives = 95/164 (57.93%), Query Frame = 0
Query:    5 RMWRFDLNQGPGEGTKDLARPLGFNPGALIEDDDTSGPSAVAQAN---LKRKRAMEIATGPGKSLLMNCFMMYMSGGSINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFLGVCAALWKMAKMGLLPVTAADWTSYLMPKNVIEYSG 165
            R W  +LN+           P+GF  G  + D + S   A   +N   LK+KRAMEI T P KSLL   FMM+MSG S+N+ SIM+T M IMN +K+  NI   F SV+DG   L+ PKL+Y A N   V  AL+K A MGLLP TAADWT  L  K  +E S 
Sbjct:    3 RKWHVELNEARESDLPGRLEPIGFCRG-FVADRENSNAVAKTASNTQELKKKRAMEIGTAPFKSLLQTGFMMWMSGSSVNIFSIMVTGMIIMNTLKSFFNIQTAFTSVNDGVIDLMQPKLVYIAGNLANVALALYKCAGMGLLPTTAADWTWLLPIKQAVETSA 165          
BLAST of mRNA_F-serratus_M_contig8.19316.1 vs. uniprot
Match: W4GJT8_9STRA (ER membrane protein complex subunit 4 n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GJT8_9STRA)

HSP 1 Score: 126 bits (317), Expect = 5.450e-34
Identity = 72/161 (44.72%), Postives = 93/161 (57.76%), Query Frame = 0
Query:    5 RMWRFDLNQGPGEGTKDLARPLGFNPGALIEDDDTSGPSAVAQANLKRKRAMEIATGPGKSLLMNCFMMYMSGGSINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFLGVCAALWKMAKMGLLPVTAADWTSYLMPKNVIEYSG 165
            R W +DLN   G      A PLG+N    +E +  +  SA    +LK+KRA EIA  P K L     MMYMSG SIN+ SIMIT M I NP+KA+ N+ G F S++DGK +L   K+ +   N + +  AL+K   MGLLP T+ADWT  L  K  +E S 
Sbjct:    3 RKWAYDLNVNTGS-----ADPLGYNKHVALEHNAVTTTSANDTLDLKQKRASEIAQAPFKGLFQTGLMMYMSGSSINIFSIMITAMAIFNPLKALFNVNGAFASLEDGKMNLAQSKVTFVVANLVAIGVALYKCGTMGLLPTTSADWTWLLPVKQALETSA 158          
BLAST of mRNA_F-serratus_M_contig8.19316.1 vs. uniprot
Match: A0A1V9ZF01_9STRA (ER membrane protein complex subunit 4 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZF01_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.190e-33
Identity = 76/165 (46.06%), Postives = 97/165 (58.79%), Query Frame = 0
Query:    4 ARMWRFDLNQGPGEGTKDLARPLGFNPGALIEDDDTSGPSAVAQAN---LKRKRAMEIATGPGKSLLMNCFMMYMSGGSINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFLGVCAALWKMAKMGLLPVTAADWTSYLMPKNVIEYSG 165
            +R W +DLN G      +   PLG N      D+ +   +A    N   LK+KRA E+AT P K L    FMM+MSG SIN+ SIMIT M  +NPVKA+ NI G F ++DDGK  LL  KLI+ A NF+ +  AL+K   MGLLP T++DWT  L  K  +E S 
Sbjct:    2 SRKWAYDLNAG------NAPEPLGSNKHTF--DEPSGAVTAKGGDNTLELKKKRANEVATAPFKGLFQTGFMMWMSGSSINIFSIMITAMAFVNPVKALFNINGAFAALDDGKLDLLQFKLIFVASNFVAIGVALYKCGTMGLLPTTSSDWTWLLPVKEAVEASS 158          
BLAST of mRNA_F-serratus_M_contig8.19316.1 vs. uniprot
Match: A0A024U389_9STRA (ER membrane protein complex subunit 4 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U389_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.190e-33
Identity = 70/161 (43.48%), Postives = 94/161 (58.39%), Query Frame = 0
Query:    5 RMWRFDLNQGPGEGTKDLARPLGFNPGALIEDDDTSGPSAVAQANLKRKRAMEIATGPGKSLLMNCFMMYMSGGSINMISIMITFMGIMNPVKAIVNIPGTFRSVDDGKNSLLLPKLIYSALNFLGVCAALWKMAKMGLLPVTAADWTSYLMPKNVIEYSG 165
            R W +DLN          A PLG+N    ++ +  +  SA    +LK+KRA EIA  P K L     MMYMSG SIN+ SIMIT M I NP+KA+ N+ G F S++DGK +L+  K+ +   N + +  AL+K   MGLLP T+ADWT  L  K+ +E S 
Sbjct:    3 RKWAYDLNVNTS-----AADPLGYNKHVALDHNAVTTTSANDTLDLKQKRATEIAQAPFKGLFQTGLMMYMSGSSINIFSIMITAMAIFNPLKALFNVNGAFASLEDGKLNLVQAKITFVVANLVAIAVALYKCGTMGLLPTTSADWTWLLPIKHALETSA 158          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19316.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRK4_ECTSI1.260e-8677.11ER membrane protein complex subunit 4 n=1 Tax=Ecto... [more]
A0A7S2FYU7_9STRA3.190e-4852.35ER membrane protein complex subunit 4 n=1 Tax=Flor... [more]
A0A6H5JF63_9PHAE1.290e-4458.00ER membrane protein complex subunit 4 n=1 Tax=Ecto... [more]
A0A7S2DUV1_9STRA3.000e-4348.19ER membrane protein complex subunit 4 n=1 Tax=Dict... [more]
A0A7S2SV60_9STRA8.520e-4248.48ER membrane protein complex subunit 4 n=1 Tax=Rhiz... [more]
A0A5D6XRF1_9STRA2.670e-3545.96ER membrane protein complex subunit 4 n=1 Tax=Pyth... [more]
K3WTT5_GLOUD4.580e-3446.95ER membrane protein complex subunit 4 n=1 Tax=Glob... [more]
W4GJT8_9STRA5.450e-3444.72ER membrane protein complex subunit 4 n=4 Tax=Apha... [more]
A0A1V9ZF01_9STRA2.190e-3346.06ER membrane protein complex subunit 4 n=3 Tax=Sapr... [more]
A0A024U389_9STRA2.190e-3343.48ER membrane protein complex subunit 4 n=1 Tax=Apha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009445TMEM85/ER membrane protein complex subunit 4PFAMPF06417DUF1077coord: 46..154
e-value: 5.1E-36
score: 123.3
IPR009445TMEM85/ER membrane protein complex subunit 4PANTHERPTHR19315FAMILY NOT NAMEDcoord: 3..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 137..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..70
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 71..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8contigF-serratus_M_contig8:763067..774034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8.19316.1mRNA_F-serratus_M_contig8.19316.1Fucus serratus malemRNAF-serratus_M_contig8 763067..774034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig8.19316.1 ID=prot_F-serratus_M_contig8.19316.1|Name=mRNA_F-serratus_M_contig8.19316.1|organism=Fucus serratus male|type=polypeptide|length=169bp
MSPARMWRFDLNQGPGEGTKDLARPLGFNPGALIEDDDTSGPSAVAQANL
KRKRAMEIATGPGKSLLMNCFMMYMSGGSINMISIMITFMGIMNPVKAIV
NIPGTFRSVDDGKNSLLLPKLIYSALNFLGVCAALWKMAKMGLLPVTAAD
WTSYLMPKNVIEYSGVPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009445TMEM85/Emc4