prot_F-serratus_M_contig8.19314.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig8.19314.1
Unique Nameprot_F-serratus_M_contig8.19314.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length482
Homology
BLAST of mRNA_F-serratus_M_contig8.19314.1 vs. uniprot
Match: A0A6H5JHB7_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHB7_9PHAE)

HSP 1 Score: 565 bits (1456), Expect = 7.240e-197
Identity = 352/509 (69.16%), Postives = 374/509 (73.48%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVKLHKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGILAKNKDLVKAFGTDDQLEVCRIILDKGEMQASDESGIYIFVVLQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQASELTHKLKEVMPIDRAKMKLRVTTDEDSATLKEALMDVGVDSFESGGDGAGAXTGSGLVLDFLVDPGIYRDVEETVRTVGGGRCVLEVLQLSVQHEGEADMDVELMRKGLLAVKLKGDDKSKRAGVARTGEDTAERGED-------------------LMPASGRRRGGKGIGSLEDXXXXXXXXXQRKGGKTG-----------GDVGKRGGKXXXXXXXXXXXXAAEREIRXXXXXXXXXXXXXDKAERFGEREGVQASDRQGAQGAASSTAGD-GGAKKPLGCNTCGLTFPDTGTHREHYKSDLHRYNLKLKLKGGTPVSEEEFRLVDAEDFFYSD 478
            MSRAITQPVNQVRLTNVAVV+L+KTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKG+LAKNKDL+KAFGTD+QLE CRIILDKGEMQ              VSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQA E+  KLKEVMPIDRAKMKLR++TDEDS  LKEAL ++GVDSFE+GG GA A + SG VLDFLVDPG+YRDVEE VRT  GGRC LEVLQLSVQ EGEADMDVELMRK LLAVKLKG++                                       +MPA+GRR  GKG     D    XXXXX                   G VGKRGG XXXXXXXXXXX AAER+IR        XXXX  KAER  E  G  A   +  Q A     GD G AK+PLGCNTCGLTFPDTG HREHYKSDLHRYNLKLK+KGGTPVSEEEFRLVDA DFF+SD
Sbjct:    1 MSRAITQPVNQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACRIILDKGEMQ--------------VSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRISTDEDSTPLKEALGELGVDSFENGG-GAAAGS-SGEVLDFLVDPGLYRDVEEAVRTAAGGRCALEVLQLSVQQEGEADMDVELMRKELLAVKLKGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLIMPAAGRR--GKGRPGFSDDYNDXXXXXXXXXXXXXXARGXXXXXXXGGVGKRGGXXXXXXXXXXXXEAAERDIRQQEAQQRQXXXXQAKAERLAEGAGRAAGATERDQDAREQGGGDVGKAKRPLGCNTCGLTFPDTGAHREHYKSDLHRYNLKLKMKGGTPVSEEEFRLVDANDFFHSD 491          
BLAST of mRNA_F-serratus_M_contig8.19314.1 vs. uniprot
Match: A0A835Z759_9STRA (SBDS protein C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z759_9STRA)

HSP 1 Score: 330 bits (846), Expect = 1.920e-105
Identity = 249/479 (51.98%), Postives = 292/479 (60.96%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVKLHKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGILAKNKDLVKAFGTDDQLEVCRIILDKGEMQASDESGIYIFVVLQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQASELTHKLKEVMPIDRAKMKLRVTTDEDSATLKEA-LMDVGVDSFESGGDGAGAXTGSGLVLDFLVDPGIYRDVEETVRTVGGGRCVLEVLQLSVQHEGEADMDVELMRKGLLAVKLKGDDKSKRAGVARTGEDTAERGEDLMPASGRRRGGKGIGSLEDXXXXXXXXXQRKGGKTGGDVGKRGGKXXXXXXXXXXXXAAEREIRXXXXXXXXXXXXXDKAERFGEREGVQASDRQGAQGAASSTAGDGGAKKPLGCNTCGLTFPDTGTHREHYKSDLHRYNLKLKLKGGTPVSEEEFRLVDAEDFFYSD 478
            MSRA+ QPV QVRLTNVAVV++ +TGKRFEIACYRNKVVNWRNRVETDL+EVLQI +VF+NVSKG+LA  KD+ KAFGT+D+ E+ R ILDKGE+Q              VSDKER+   ES FRDVATIVSEKCVNP SNRPYTVSMIE AMRDVHF+  P +SAK QA EL  +LKEVMPI RA M LRVT     A   EA L  +GV  FE         T +   +D LVDPG++R +EE +R  GGG   +EVLQLSVQ EGEAD+D+E  RKG+LA++++      +A                                  XXXXXXXXX                 XXXXXXXXXXXX       XXXXXXXXXXXXX                  G++               L CNTC   F DT  +R+H+KSD HRYNLKLK+KG + VSE+EFR VDAE FF+ +
Sbjct:    1 MSRAVFQPVGQVRLTNVAVVRVTRTGKRFEIACYRNKVVNWRNRVETDLNEVLQITTVFQNVSKGVLANKKDMAKAFGTEDEDEIIRYILDKGEVQ--------------VSDKERRAQYESAFRDVATIVSEKCVNPHSNRPYTVSMIENAMRDVHFAVAPNKSAKAQALELIPRLKEVMPIARASMLLRVTAPAALAQSVEASLSALGVTHFEKQ-----TRTEAEHSVDVLVDPGLFRGIEEALRGSGGGAARVEVLQLSVQQEGEADIDLEAARKGVLALQVQ------QAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSK---------------LKCNTCAAAFADTTAYRDHFKSDWHRYNLKLKMKGVSVVSEDEFRSVDAEGFFFEE 439          
BLAST of mRNA_F-serratus_M_contig8.19314.1 vs. uniprot
Match: A0A4D9CZ78_9STRA (C2H2-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ78_9STRA)

HSP 1 Score: 314 bits (804), Expect = 5.350e-99
Identity = 233/486 (47.94%), Postives = 298/486 (61.32%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVKLHKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGILAKNKDLVKAFGTDDQLEVCRIILDKGEMQASDESGIYIFVVLQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQASELTHKLKEVMPIDRAKMKLRVT--TDEDSATLKEALMDVGVDSFESGGDGAGAXTGSGLVLDFLVDPGIYRDVEETVRTVGGGRCVLEVLQLSVQHEGEADMDVELMRKGLLAVKLKGDDKSKRAGVARTGEDTAERG----EDLMPASGRRRGG--KGIGSLEDXXXXXXXXXQRKGGKTGGDVGKRGGKXXXXXXXXXXXXAAEREIRXXXXXXXXXXXXXDKAERFGERE-GVQASDRQGAQGAASSTAGDGGAKKPLGCNTCGLTFPDTGTHREHYKSDLHRYNLKLKLKGGTPVSEEEFRLVDAEDFFYS 477
            MSR I QPVNQVRLTNVA+V++HK GKRFEIACYRNKV++WR  VE D+DEVLQ  ++F NVSKG+LA +KDL+  FG DD   + R+IL+KGE   SD              KER+   ES++RD+ATIV+ K VNP SNRPYTV+MI   M+D+HF+ +PTR AKQQA E+  +L++VMP++RAKM+L+V   T ED A + E +   G+D     G+   A TG    +D LVDPG++R V+E VR  G G+  L VL+LSVQ EGEAD+D+E+ RK   A++ +  D+S  A   +  E+  ER      D    +G  RG   K  G+ +           ++G K+ G        XXXXXXXXXXXX       XXXXXXXXXXXXX    + G  E G     R G+                L CNTC + F D   +REHY++D HRYNLKLK KGG PVSE EF LVDA++ F S
Sbjct:    1 MSRRIGQPVNQVRLTNVAMVRVHKGGKRFEIACYRNKVLSWRQGVEKDIDEVLQTHAIFLNVSKGVLASSKDLMDCFGQDDVEALLRLILEKGEYHPSD--------------KEREAMHESLYRDIATIVAIKSVNPTSNRPYTVNMILSGMKDIHFAVNPTRGAKQQALEVIRRLQDVMPLERAKMRLKVVCPTTEDLAQVVEGMASFGID-----GNTVEA-TGKKEEVDLLVDPGLFRRVDELVR--GKGKGALHVLELSVQQEGEADVDLEIARKA--AMRKEQRDESAVANTFKAFEEAREREGRKETDQEGEAGFLRGANVKAHGNEDSVVEGAEEHVDKQGTKSRGSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGGSERGSWEKARPGSN--------------RLACNTCHVDFQDAKEYREHYRTDWHRYNLKLKEKGGGPVSEAEFELVDADEMFCS 448          
BLAST of mRNA_F-serratus_M_contig8.19314.1 vs. uniprot
Match: A0A7S2W459_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W459_9STRA)

HSP 1 Score: 278 bits (711), Expect = 3.960e-85
Identity = 224/481 (46.57%), Postives = 276/481 (57.38%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVKLHKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGILAKNKDLVKAFGTDDQLEVCRIILDKGEMQASDESGIYIFVVLQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQASELTHKLKEVMPIDRAKMKLRV-TTDEDSAT-LKEALMDVGVDSFESGGDGAGAXTGSGLV--LDFLVDPGIYRDVEETVRTVGGGRCVLEVLQLSVQHEGEADM-DVELMRKGLLAVKLKGDDKSKRAGVARTGEDTAERGEDLMPASGRRRGGKGIGSLEDXXXXXXXXXQRKGGKTGGDVGKRGGKXXXXXXXXXXXXAAEREIRXXXXXXXXXXXXXDKAERFGEREGVQASDRQGAQGAASSTAGDGGAKKPLGCNTCGLTFPDTGTHREHYKSDLHRYNLKLKLKGGTPVSEEEFRLVDAEDFFY 476
            MS  +  PVNQ RLTNV+VV+L+K GKRFEIACY NKVV+WRN +ETDL EVLQ E VF NV+KG  AK KDL KAFGTDD  +VCRIIL++GE              LQVS KERQ A E+VFRD+ATIVSEKCVNP +NRPYTVS I  AM+++HF+  P R AKQQA E+  +L E M I RA+M +R    D+D AT ++EA+  +      +G       TGS  V  LDF ++P  +R+    V    GGR  LEV+QL+VQ +   D+    ++ +  L        +   AG A + E  A       P  G +  G+  G L            R G K   D G +   XXXXXXXXXXXX       XXXXXXXXXXXXX               D  G  G     A D   ++   CNTCG +F     HREH+KSD HRYNLKLK++G  PVSE E+  VDA+  F+
Sbjct:    4 MSLRVKTPVNQKRLTNVSVVRLNKHGKRFEIACYNNKVVSWRNGIETDLGEVLQSEFVFSNVNKGEFAKAKDLHKAFGTDDLDQVCRIILEEGE--------------LQVSGKERQAAQENVFRDIATIVSEKCVNPTNNRPYTVSTIMNAMKEIHFAVQPGRPAKQQALEVIKRLAEHMNIARAQMHVRAHPADQDQATRVREAMAGLRATLVTTG-----KGTGSDAVAQLDFYLEPSRFREATSAVTEACGGRSALEVVQLAVQADASGDIGSARVLEESALP-------RPAAAGAAGSAE--AHLDPPPPPRQGAKPEGEDAG-LAVAMTSLDVGDARPGKK---DKGNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMLPDG-GVAGTTEDHAADTNTRRS--CNTCGGSFSSPAAHREHFKSDWHRYNLKLKMQGHEPVSEAEYLAVDADGGFF 449          
BLAST of mRNA_F-serratus_M_contig8.19314.1 vs. uniprot
Match: A0A7M7G5I7_NASVI (Ribosome maturation protein SBDS n=1 Tax=Nasonia vitripennis TaxID=7425 RepID=A0A7M7G5I7_NASVI)

HSP 1 Score: 260 bits (664), Expect = 9.320e-81
Identity = 144/269 (53.53%), Postives = 192/269 (71.38%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVKLHKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGILAKNKDLVKAFGTDDQLEVCRIILDKGEMQASDESGIYIFVVLQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQASELTHKLKEVMPIDRAKMKLRV-TTDEDSATLKEALMDVGVDSFESGGDGAGAXTGSGLVLDFLVDPGIYRDVEETVRTVGGGRCVLEVLQLSVQHEGE 268
            MS+  T PVNQ+RLTNVAVV++ K GKRFEIACYRNKV++WRN++E D+DEVLQ  +VF NVSKG +AK +DL+KAFG DDQ E+C+ IL+KGE              LQVSDKER  AL+S+F+D+AT V++KCVNP S RPY+VS+IEKAM+D+HFS  P R+AKQQA E+  +LK VMP++RA+M+LRV  + +++  L+E ++ +     ES    +G+     L L  L+DPG YR+++E VR    G  VLE+L L    EGE
Sbjct:    1 MSKIFT-PVNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLEKDIDEVLQTHTVFMNVSKGQVAKKEDLIKAFGKDDQTEICKEILEKGE--------------LQVSDKERHSALDSMFKDIATTVADKCVNPESKRPYSVSLIEKAMKDIHFSVKPNRNAKQQALEVITQLKTVMPLERAQMRLRVLVSGKEARKLREKIVKL-TTKVESEDWNSGS-----LDLVCLIDPGHYREIDELVRAETKGSGVLELLNLKEITEGE 248          
BLAST of mRNA_F-serratus_M_contig8.19314.1 vs. uniprot
Match: A0A2J7PVY7_9NEOP (Ribosome maturation protein SBDS n=3 Tax=Termitoidae TaxID=1912919 RepID=A0A2J7PVY7_9NEOP)

HSP 1 Score: 257 bits (656), Expect = 1.470e-79
Identity = 143/269 (53.16%), Postives = 184/269 (68.40%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVKLHKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGILAKNKDLVKAFGTDDQLEVCRIILDKGEMQASDESGIYIFVVLQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQASELTHKLKEVMPIDRAKMKLR-VTTDEDSATLKEALMDVGVDSFESGGDGAGAXTGSGLVLDFLVDPGIYRDVEETVRTVGGGRCVLEVLQLSVQHEGE 268
            MS+  T P NQ+RLTNVAVV++ K GKRFEIACYRNKVV+WRN++ETD+DEVLQ  +VF NVSKG +AK +DL+KAFG DDQ EVC+ IL KGE              LQVSDKERQ  LES+F+D+AT VS+KCVNP + RPY VSMIEKAM+D HFS  P R+AKQQA ++   LK  MP++RA+M++R V + +D+  L++ +  +         DG        L +  L+DPG YR+V+E VRT   G  +LE++ L    EGE
Sbjct:    1 MSKIFT-PTNQIRLTNVAVVRMRKGGKRFEIACYRNKVVSWRNKIETDIDEVLQTHTVFTNVSKGQVAKKEDLLKAFGKDDQTEVCKEILAKGE--------------LQVSDKERQSQLESLFKDIATTVSDKCVNPETKRPYPVSMIEKAMKDAHFSVKPNRNAKQQALDVIPLLKSTMPLERAQMRIRAVLSGKDARKLRDKVAKLATSVESEDWDGGQ------LNMVCLIDPGHYREVDEIVRTETKGHGLLELMNLKEVTEGE 248          
BLAST of mRNA_F-serratus_M_contig8.19314.1 vs. uniprot
Match: UPI000771B1AA (ribosome maturation protein SBDS n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771B1AA)

HSP 1 Score: 256 bits (655), Expect = 2.080e-79
Identity = 140/265 (52.83%), Postives = 187/265 (70.57%), Query Frame = 0
Query:    5 ITQPVNQVRLTNVAVVKLHKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGILAKNKDLVKAFGTDDQLEVCRIILDKGEMQASDESGIYIFVVLQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQASELTHKLKEVMPIDRAKMKLRVT-TDEDSATLKEALMDVGVDSFESGGDGAGAXTGSGLVLDFLVDPGIYRDVEETVRTVGGGRCVLEVLQLSVQHEGE 268
            I  P+NQ+RLTNVAVV++ K GKRFEIACYRNKVV+WRN++E D++EVLQ  +VF NVSKG +AK +DL+KAFG +DQ E+C+ IL+KGE              LQVSDKER  AL+S+ +D+AT V+EKCVNP + RPY VSMIEKAM+D+HFS  P R+AKQQA ++  +LK VMP++RA+M+LRV  T +++  L+E +M +         D     +GS L L  L+DPG YR+++E VR+   G  +LE+L L    EGE
Sbjct:    4 IFTPINQIRLTNVAVVRMKKGGKRFEIACYRNKVVSWRNKLEKDINEVLQTHTVFTNVSKGQVAKKEDLIKAFGKEDQTEICKDILEKGE--------------LQVSDKERHSALDSMLKDIATTVAEKCVNPETKRPYPVSMIEKAMKDIHFSVKPNRNAKQQALDVIQQLKTVMPLERAQMRLRVLITGKEARKLREKIMKLAAKVESEDWD-----SGS-LNLICLIDPGQYREIDELVRSETKGHGILELLNLKEVTEGE 248          
BLAST of mRNA_F-serratus_M_contig8.19314.1 vs. uniprot
Match: A0A0C9Q0K3_9HYME (Ribosome maturation protein SBDS n=2 Tax=Opiinae TaxID=68883 RepID=A0A0C9Q0K3_9HYME)

HSP 1 Score: 256 bits (654), Expect = 2.940e-79
Identity = 142/269 (52.79%), Postives = 190/269 (70.63%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVKLHKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGILAKNKDLVKAFGTDDQLEVCRIILDKGEMQASDESGIYIFVVLQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQASELTHKLKEVMPIDRAKMKLRVT-TDEDSATLKEALMDVGVDSFESGGDGAGAXTGSGLVLDFLVDPGIYRDVEETVRTVGGGRCVLEVLQLSVQHEGE 268
            MS+  T P+NQ+RLTNVAVV++ K GKRFEIACYRNKVV+WRN++E D+DEVLQ  +VF NVSKG ++K +DL+KAFGTD+Q E+C+ IL KGE              LQVSDKER  AL+S+F+D+AT V++KCVNP S RPY VSMIEKAM+DVHFS  P R+AKQQA E+  +LK VMP++RA+M+LRV  + +++  L++ ++ +   S ES     G      L L  L+DPG YR ++E +R+   G  +LE++ L    EGE
Sbjct:    1 MSKLFT-PINQIRLTNVAVVRMKKQGKRFEIACYRNKVVSWRNKLEKDIDEVLQTHTVFTNVSKGQMSKKEDLLKAFGTDNQTEICKEILSKGE--------------LQVSDKERHSALDSMFKDIATTVADKCVNPDSKRPYPVSMIEKAMKDVHFSVKPHRNAKQQALEVIPQLKSVMPLERAQMRLRVVISGKEARKLRDKIVKM-TTSVESENWAEGT-----LDLTCLIDPGNYRKIDELIRSETRGTGILELVNLKEVTEGE 248          
BLAST of mRNA_F-serratus_M_contig8.19314.1 vs. uniprot
Match: T1HFI4_RHOPR (Ribosome maturation protein SBDS (Fragment) n=5 Tax=Triatominae TaxID=70999 RepID=T1HFI4_RHOPR)

HSP 1 Score: 256 bits (653), Expect = 4.420e-79
Identity = 141/269 (52.42%), Postives = 186/269 (69.14%), Query Frame = 0
Query:    5 ITQPVNQVRLTNVAVVKLHKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGILAKNKDLVKAFGTDDQLEVCRIILDKGEMQASDESGIYIFVVLQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQASELTHKLKEVMPIDRAKMKLRVT-TDEDSATLKEALM----DVGVDSFESGGDGAGAXTGSGLVLDFLVDPGIYRDVEETVRTVGGGRCVLEVLQLSVQHEGE 268
            I  P NQ+RLTNVAVV++ K GKRFEIACY+NKVV+WRN VE D+DEVLQ  +VF NVSKG +AK +DL+KAFG D+  E+C+ IL KGE              LQVSDKERQ  L+S+F+D+AT V++KCVNP + RPY VSMIEKAMRD+HFS  P R+AKQQ  E+  +LK VMP+DRA+M+LRV  + +++  L+E L      +  ++++SGG+         L +  L+DPG YR V+E + +V G   +LE+LQL    EGE
Sbjct:    5 IFTPTNQIRLTNVAVVRMKKAGKRFEIACYKNKVVSWRNNVEKDIDEVLQTHTVFTNVSKGQVAKKEDLLKAFGKDELTEICKEILKKGE--------------LQVSDKERQNQLDSLFKDIATNVADKCVNPETKRPYPVSMIEKAMRDIHFSIKPNRNAKQQTLEVIPQLKAVMPLDRAQMRLRVALSGKEARKLREKLAALTTSIESETWDSGGE---------LQMICLIDPGRYRQVDELIHSVKGSNGMLELLQLKEVTEGE 250          
BLAST of mRNA_F-serratus_M_contig8.19314.1 vs. uniprot
Match: UPI00158EA940 (ribosome maturation protein SBDS n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158EA940)

HSP 1 Score: 254 bits (648), Expect = 2.400e-78
Identity = 139/269 (51.67%), Postives = 185/269 (68.77%), Query Frame = 0
Query:    1 MSRAITQPVNQVRLTNVAVVKLHKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGILAKNKDLVKAFGTDDQLEVCRIILDKGEMQASDESGIYIFVVLQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQASELTHKLKEVMPIDRAKMKLRVTTDEDSAT-LKEALMDVGVDSFESGGDGAGAXTGSGLVLDFLVDPGIYRDVEETVRTVGGGRCVLEVLQLSVQHEGE 268
            MS+  T P NQ+RLTNVAVV++ K GKRFEIACYRNKVV+WRN +E D+DEVLQ  +VF NVSKG +AK +DL+ AFG D+Q E+C+ IL KGE              LQVSDKER  AL+S+F+D+ATIVSEKCVNP S RPY VSMIEKAM+D+HFS  P R++KQQA E+  +LK V+P++RA+MK+R+     +A  LKE ++ +         DG    +     +D L+DPG YR+++E +R    G+ ++E++ L    EGE
Sbjct:    1 MSKIFT-PTNQIRLTNVAVVRMKKGGKRFEIACYRNKVVSWRNNLEKDIDEVLQTHTVFINVSKGQVAKKEDLIAAFGNDNQTEICKEILAKGE--------------LQVSDKERHSALDSMFKDIATIVSEKCVNPESKRPYPVSMIEKAMKDIHFSVKPNRNSKQQALEIIPQLKAVIPLERAQMKIRIVYSNKTAKKLKEKIVKLVTKIENECWDGGNLGS-----IDCLIDPGKYREIDELIRAETRGQGMVELMSLKEITEGE 249          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8.19314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHB7_9PHAE7.240e-19769.16C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z759_9STRA1.920e-10551.98SBDS protein C-terminal domain-containing protein ... [more]
A0A4D9CZ78_9STRA5.350e-9947.94C2H2-type domain-containing protein n=2 Tax=Monodo... [more]
A0A7S2W459_9STRA3.960e-8546.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7M7G5I7_NASVI9.320e-8153.53Ribosome maturation protein SBDS n=1 Tax=Nasonia v... [more]
A0A2J7PVY7_9NEOP1.470e-7953.16Ribosome maturation protein SBDS n=3 Tax=Termitoid... [more]
UPI000771B1AA2.080e-7952.83ribosome maturation protein SBDS n=1 Tax=Cephus ci... [more]
A0A0C9Q0K3_9HYME2.940e-7952.79Ribosome maturation protein SBDS n=2 Tax=Opiinae T... [more]
T1HFI4_RHOPR4.420e-7952.42Ribosome maturation protein SBDS (Fragment) n=5 Ta... [more]
UPI00158EA9402.400e-7851.67ribosome maturation protein SBDS n=1 Tax=Chelonus ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 360..385
NoneNo IPR availableGENE3D3.30.70.240coord: 187..272
e-value: 5.8E-8
score: 34.7
NoneNo IPR availablePANTHERPTHR10927:SF1RIBOSOME MATURATION PROTEIN SBDScoord: 109..271
coord: 1..100
IPR002140Ribosome maturation protein Sdo1/SBDSTIGRFAMTIGR00291TIGR00291coord: 11..254
e-value: 3.6E-48
score: 161.9
IPR018978Ribosome maturation protein SBDS, C-terminalPFAMPF09377SBDS_Ccoord: 123..246
e-value: 3.5E-29
score: 101.2
IPR019783Ribosome maturation protein SBDS, N-terminalPFAMPF01172SBDScoord: 16..100
e-value: 1.4E-28
score: 98.8
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilyGENE3D3.30.1250.10coord: 1..96
e-value: 1.2E-40
score: 139.4
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilySUPERFAMILY89895FYSH domaincoord: 12..96
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilyGENE3D1.10.10.900coord: 114..186
e-value: 1.2E-31
score: 110.5
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilySUPERFAMILY109728Hypothetical protein AF0491, middle domaincoord: 111..184
IPR039100Ribosome maturation protein Sdo1/SBDS-likePANTHERPTHR10927RIBOSOME MATURATION PROTEIN SBDScoord: 109..271
coord: 1..100
IPR018023Ribosome maturation protein SBDS, conserved sitePROSITEPS01267UPF0023coord: 46..65
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 425..447

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8contigF-serratus_M_contig8:736612..744613 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8.19314.1mRNA_F-serratus_M_contig8.19314.1Fucus serratus malemRNAF-serratus_M_contig8 736510..745171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig8.19314.1 ID=prot_F-serratus_M_contig8.19314.1|Name=mRNA_F-serratus_M_contig8.19314.1|organism=Fucus serratus male|type=polypeptide|length=482bp
MSRAITQPVNQVRLTNVAVVKLHKTGKRFEIACYRNKVVNWRNRVETDLD
EVLQIESVFENVSKGILAKNKDLVKAFGTDDQLEVCRIILDKGEMQASDE
SGIYIFVVLQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIE
KAMRDVHFSAHPTRSAKQQASELTHKLKEVMPIDRAKMKLRVTTDEDSAT
LKEALMDVGVDSFESGGDGAGAGTGSGLVLDFLVDPGIYRDVEETVRTVG
GGRCVLEVLQLSVQHEGEADMDVELMRKGLLAVKLKGDDKSKRAGVARTG
EDTAERGEDLMPASGRRRGGKGIGSLEDDDNNDDDGPQRKGGKTGGDVGK
RGGKKSKGAKRRQKEEAAEREIRQQEAQQRQDKREQDKAERFGEREGVQA
SDRQGAQGAASSTAGDGGAKKPLGCNTCGLTFPDTGTHREHYKSDLHRYN
LKLKLKGGTPVSEEEFRLVDAEDFFYSDTRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002140Sdo1/SBDS
IPR018978Ribosome_mat_SBDS_C
IPR019783Ribosome_mat_SBDS_N
IPR036786Ribosome_mat_SBDS_N_sf
IPR037188Sdo1/SBDS_central_sf
IPR039100Sdo1/SBDS-like
IPR018023Ribosome_mat_SBDS_CS
IPR013087Znf_C2H2_type