prot_F-serratus_M_contig797.19268.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig797.19268.1
Unique Nameprot_F-serratus_M_contig797.19268.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length492
Homology
BLAST of mRNA_F-serratus_M_contig797.19268.1 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE)

HSP 1 Score: 307 bits (787), Expect = 3.610e-95
Identity = 256/567 (45.15%), Postives = 306/567 (53.97%), Query Frame = 0
Query:    1 MAALIADTSPMMRKISSETASERRSLGFSPPSPLSFARYLAEGR-HTDHGHGRLHSPNTRSYPPHQTPSPYPRGYGYSAQEAFPYDNAGVPARITPK----------SCRCPR-ECSCASASSSSAPCPNSAEPDSPSAMWRKEK-------------MEGKT-ATSPKQGLYVSGVSGRPTSSKASVA-NRSTQSAR---DAIEDLPRPSKKHKSDWENLLGAVDLELRAQKRAECVPEISSGAVPQVSP----ASCASRRHPLHPSAGDNLYRSSSAGVT------AVDSPEFGSYKPTHRRGG---------DAVSGGGPAYSGSTADAACLLATLPQRMLDRASMSGLAPKAPP-------------------------VSMSSPVLVSPPPVGLIPGQPLRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDASALQHFAQGAKLNFPDGIEEQLHDLSNGGRTPYPTAGAAANAVEGSGSGGAAAARSATPPALEQAEGSNGVG-------RKRSRKSSYGGNGDDDEWIRGEGPWNNS 486
            M ALIADTSP++R I S+ A +RRS  FSP SP+  ++YL+EG    DH   R HSP+  +Y   + P+ YP  YGY+   +F + +  VPA    +          SCRC R +CSC S+ S +A   +S+  + P AMWR  K               G+  A  P   + VS  S  P+ S A +A NR   S+R     IE    PSKK  SDWENLLGAVDLELRAQ+R++ VP+ S+ A P  S     A  A+  H  H    D     +  G T      A  SPEFG  K      G                  YSGSTADAACLLATLPQRMLDR                                     V +  P LVS       P  P+RVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDA+ALQHFA+GAKLNFPDGIE QL+D+S+    P+ TAGA          GGAAA RS TPPA    EG             KRSRK+++G + D+D W R +GPW+ S
Sbjct:    1 MTALIADTSPILRNIPSDPA-DRRSFEFSP-SPMP-SQYLSEGTARQDH---RRHSPSPHNYTAREVPALYPHRYGYNIGGSFAHSDPEVPAVAEKQQQQLAFKPTSSCRCQRRQCSCNSSPSETAQ-KDSSSSEPPHAMWRNSKGGDANMTTARPSFFHGEAPAQQPPAAVSVSAPSRSPSPSAAILAQNRQQHSSRVLPRTIELTSSPSKK--SDWENLLGAVDLELRAQQRSKFVPD-STPATPVPSHHYARAINAAHLHYQHQPLDDAPPLLTGGGYTQQQRAAASVSPEFGPVKTAPAPAGRHXXXXXXXXXXXXXXXXYSGSTADAACLLATLPQRMLDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGIMPPALVS---ASGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSVSGRPFATAGA----------GGAAAPRSCTPPAT-YLEGDAAAAPALPSPTAKRSRKTAFGDH-DEDGWAREDGPWHPS 542          
BLAST of mRNA_F-serratus_M_contig797.19268.1 vs. uniprot
Match: D8LFR4_ECTSI (Pathogenesis-related transcriptional factor and ERF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR4_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 1.880e-67
Identity = 202/488 (41.39%), Postives = 239/488 (48.98%), Query Frame = 0
Query:    1 MAALIADTSPMMRKISSETASERRSLGFSPPSPLSFARYLAEGRHT-DHGHGRLHSPNTRSYPPHQTPSPYPRGYGYSAQEAFPYDNAGVPARITPKSCRCPREC---------------------SCASASSSSAPCPNSAEPDSPSAMWRKEKMEGKTATSPKQGLY--------------VSGVSGRPTSSKASVA-NRSTQSAR---DAIEDLPRPSKKHKSDWENLLGAVDLELRAQKRAECVPEISSGAVPQVSP----ASCASRRHPLHPSAGD-----------------NLYRSSSAGVTAVDSPEFGSYK--PTHRRGGDAVSGG------GPAYSGSTADAACLLATLPQRMLDRASMSGLAPKAPPVSMSSPVLVSPPPVGLIPGQPLRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDASALQHFAQGAKLNFPDGIEEQLHDLSNGGRTPY 419
            M ALIADTSP++R I S+ A +RRS  FSP SP+  A+YL+EG  + DH   R HSP+  SY   + P+ YP  YGY+   +F + +  VP  +                                +    SSSS P         P AMWR  K      T+ + GL+              VS  S  P+ S A +A N+   S+R     IE    P+KK  SDWENLLGAVDLELRAQ+R+E VP+ S+ A P  S     A  A+  H  H    D                   Y        +V SPEFG  K  P  R               GPAYSGSTADAACLL                                               ASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDA+ALQHFA+GAKLNFPDGIE QL+D+S+   TP+
Sbjct:    1 MTALIADTSPILRNIPSDPA-DRRSFEFSP-SPMP-AQYLSEGTASQDH---RRHSPSPHSYTAREVPALYPHRYGYNMGGSFAHSDPQVPVAVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAQKDSSSSEP---------PHAMWRNSKGGDANMTTARPGLFHGEAPAQQPPAAVSVSAPSRSPSPSAAILAQNQQQHSSRVMPRTIELTSSPAKK--SDWENLLGAVDLELRAQQRSEFVPD-STPATPVPSHHYAHAINAAHLHHQHQPLDDAPPLLTGXXXXXXXXXXXXYTQHQPAAASV-SPEFGPIKTAPAARHXXXXXXXXXXXXXXGPAYSGSTADAACLL-----------------------------------------------ASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNFPDGIERQLNDISSAD-TPF 421          
BLAST of mRNA_F-serratus_M_contig797.19268.1 vs. uniprot
Match: A0A835Z3I9_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I9_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.660e-27
Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 0
Query:  334 QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDASALQHFAQGAKLN 399
            QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGV+DSE  AARAY+ SAL+HF  GAKLN
Sbjct:  227 QASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVYDSELQAARAYNDSALEHFGAGAKLN 292          
BLAST of mRNA_F-serratus_M_contig797.19268.1 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK)

HSP 1 Score: 118 bits (295), Expect = 1.630e-26
Identity = 53/72 (73.61%), Postives = 66/72 (91.67%), Query Frame = 0
Query:  332 RVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDASALQHFAQGAKLNFPDG 403
            RVQ++GRRGPRGQS+FKGVC+TRAGKWR+VIY+GRKQ YLGVF++E +AA+AYD SA+++F  GA LNFPDG
Sbjct:  137 RVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNFPDG 208          
BLAST of mRNA_F-serratus_M_contig797.19268.1 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK)

HSP 1 Score: 118 bits (295), Expect = 2.170e-26
Identity = 53/72 (73.61%), Postives = 66/72 (91.67%), Query Frame = 0
Query:  332 RVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDASALQHFAQGAKLNFPDG 403
            RVQ++GRRGPRGQS+FKGVC+TRAGKWR+VIY+GRKQ YLGVF++E +AA+AYD SA+++F  GA LNFPDG
Sbjct:  150 RVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNFPDG 221          
BLAST of mRNA_F-serratus_M_contig797.19268.1 vs. uniprot
Match: D7FLT6_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT6_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 4.000e-25
Identity = 60/87 (68.97%), Postives = 68/87 (78.16%), Query Frame = 0
Query:  338 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDASALQHFAQGAKLNFPDGIEEQLHDLSNGGRTPYPTAGA 424
            RRGP GQS FKGVCIT AG WRAVIY+ RKQKYLGVFDSEFDAARAYDA+A  H   G++LN PD IE +L++LS     P+ TAGA
Sbjct:  304 RRGPPGQSSFKGVCITPAGTWRAVIYVDRKQKYLGVFDSEFDAARAYDAAARVH-CPGSQLNNPDQIERELYELSAADGKPFATAGA 389          
BLAST of mRNA_F-serratus_M_contig797.19268.1 vs. uniprot
Match: A0A6H5KY97_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY97_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 7.290e-25
Identity = 60/87 (68.97%), Postives = 69/87 (79.31%), Query Frame = 0
Query:  338 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDASALQHFAQGAKLNFPDGIEEQLHDLSNGGRTPYPTAGA 424
            RRGP GQS FKGVCIT AG WRAVIY+ RKQKYLGVFDSEFDAARAYDA+A + +  G++LN PD IE +LH+LS     P+ TAGA
Sbjct:  421 RRGPPGQSSFKGVCITPAGTWRAVIYVDRKQKYLGVFDSEFDAARAYDAAA-RVYCPGSQLNNPDQIERELHELSAADGKPFATAGA 506          
BLAST of mRNA_F-serratus_M_contig797.19268.1 vs. uniprot
Match: A0A835YVU4_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVU4_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.000e-17
Identity = 51/78 (65.38%), Postives = 54/78 (69.23%), Query Frame = 0
Query:  335 ASGRRGPRGQSRFKGVCITRAGKWRAVI-------------YIGRKQKYLGVFDSEFDAARAYDASALQHFAQGAKLN 399
            A  RRGPRGQSRFKGVCITRAGKWRAVI             +IGR+QKYLGVFDSE  AA AY+ SA Q F   AKLN
Sbjct:  187 AKSRRGPRGQSRFKGVCITRAGKWRAVICEWLAAVAEFLHNHIGRRQKYLGVFDSEVQAAVAYNESAKQFFGAEAKLN 264          
BLAST of mRNA_F-serratus_M_contig797.19268.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 4.220e-15
Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 0
Query:  338 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDASALQHFAQGAKLNF 400
            RRG +G+S ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D +A  HF   A +NF
Sbjct:   22 RRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84          
BLAST of mRNA_F-serratus_M_contig797.19268.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.130e-15
Identity = 35/54 (64.81%), Postives = 43/54 (79.63%), Query Frame = 0
Query:  347 FKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDASALQHFAQGAKLNF 400
            ++GVC+TR GKWRAVIY  RKQ YLGVF+SE DAA+A+D +A QHF   A +NF
Sbjct:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig797.19268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQM0_9PHAE3.610e-9545.15AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D8LFR4_ECTSI1.880e-6741.39Pathogenesis-related transcriptional factor and ER... [more]
A0A835Z3I9_9STRA2.660e-2787.88AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A6V1UZI2_HETAK1.630e-2673.61Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6J2_HETAK2.170e-2673.61Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FLT6_ECTSI4.000e-2568.97AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KY97_9PHAE7.290e-2568.97AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A835YVU4_9STRA1.000e-1765.38AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CI56_9STRA4.220e-1561.90AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CH07_9STRA7.130e-1564.81AP2/ERF domain-containing protein (Fragment) n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 346..407
e-value: 3.1E-7
score: 40.1
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 345..388
e-value: 3.4E-4
score: 20.8
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 346..401
score: 13.38
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 345..402
e-value: 1.8E-11
score: 45.7
NoneNo IPR availablePANTHERPTHR32467FAMILY NOT NAMEDcoord: 329..401
NoneNo IPR availablePANTHERPTHR32467:SF94FLORAL HOMEOTIC PROTEIN APETALA 2coord: 329..401
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 345..402

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig797contigF-serratus_M_contig797:170099..172290 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig797.19268.1mRNA_F-serratus_M_contig797.19268.1Fucus serratus malemRNAF-serratus_M_contig797 169461..172562 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig797.19268.1 ID=prot_F-serratus_M_contig797.19268.1|Name=mRNA_F-serratus_M_contig797.19268.1|organism=Fucus serratus male|type=polypeptide|length=492bp
MAALIADTSPMMRKISSETASERRSLGFSPPSPLSFARYLAEGRHTDHGH
GRLHSPNTRSYPPHQTPSPYPRGYGYSAQEAFPYDNAGVPARITPKSCRC
PRECSCASASSSSAPCPNSAEPDSPSAMWRKEKMEGKTATSPKQGLYVSG
VSGRPTSSKASVANRSTQSARDAIEDLPRPSKKHKSDWENLLGAVDLELR
AQKRAECVPEISSGAVPQVSPASCASRRHPLHPSAGDNLYRSSSAGVTAV
DSPEFGSYKPTHRRGGDAVSGGGPAYSGSTADAACLLATLPQRMLDRASM
SGLAPKAPPVSMSSPVLVSPPPVGLIPGQPLRVQASGRRGPRGQSRFKGV
CITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDASALQHFAQGAKLNF
PDGIEEQLHDLSNGGRTPYPTAGAAANAVEGSGSGGAAAARSATPPALEQ
AEGSNGVGRKRSRKSSYGGNGDDDEWIRGEGPWNNSSSSRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf