prot_F-serratus_M_contig791.19199.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig791.19199.1
Unique Nameprot_F-serratus_M_contig791.19199.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length322
Homology
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BLAST of mRNA_F-serratus_M_contig791.19199.1 vs. uniprot
Match: A0A6H5JZN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN1_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.150e-5
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:  245 KVREDPKLEATERTYTAAINCFQHYTPGVKVASLDSTMAG 284
            KVR DP LEA +RTYT+AINCFQ +  G  VASL ST+AG
Sbjct:  404 KVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAG 443
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BLAST of mRNA_F-serratus_M_contig791.19199.1 vs. uniprot
Match: D7G0G1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G1_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.350e-5
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:  245 KVREDPKLEATERTYTAAINCFQHYTPGVKVASLDSTMAG 284
            KVR DP LEA +RTYT+AINCFQ +  G  VASL ST+AG
Sbjct:  579 KVRADPTLEANQRTYTSAINCFQQFQGGQSVASLASTLAG 618
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BLAST of mRNA_F-serratus_M_contig791.19199.1 vs. uniprot
Match: A0A813F431_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F431_POLGL)

HSP 1 Score: 52.0 bits (123), Expect = 8.920e-5
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:    1 MREAGISPSIFAFNAAISACGRRGRWQEALDLLEAMPK 38
            MR   + P + A+NAA+SACGR GRWQ+AL +L  MPK
Sbjct:    1 MRGQQLMPGVVAYNAALSACGRAGRWQQALSILAEMPK 38
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig791.19199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZN1_9PHAE1.150e-567.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0G1_ECTSI1.350e-567.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A813F431_POLGL8.920e-557.89Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 121..282
e-value: 3.0E-43
score: 150.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..109
e-value: 1.5E-34
score: 121.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 81..113
e-value: 3.4E-8
score: 31.1
coord: 151..185
e-value: 8.8E-9
score: 33.0
coord: 186..220
e-value: 2.1E-7
score: 28.7
coord: 12..45
e-value: 1.2E-8
score: 32.5
coord: 116..150
e-value: 6.4E-8
score: 30.3
coord: 46..79
e-value: 2.3E-5
score: 22.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 183..232
e-value: 1.7E-10
score: 40.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 79..113
score: 12.068
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 149..183
score: 11.959
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 44..78
score: 11.444
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 114..148
score: 11.422
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 12.386
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 219..249
score: 7.947
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 184..218
score: 11.783
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 13..165
e-value: 5.6E-13
score: 48.7
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 162..266
coord: 9..175
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig791contigF-serratus_M_contig791:134311..137752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig791.19199.1mRNA_F-serratus_M_contig791.19199.1Fucus serratus malemRNAF-serratus_M_contig791 134010..137813 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig791.19199.1 ID=prot_F-serratus_M_contig791.19199.1|Name=mRNA_F-serratus_M_contig791.19199.1|organism=Fucus serratus male|type=polypeptide|length=322bp
MREAGISPSIFAFNAAISACGRRGRWQEALDLLEAMPKEGISPDVFSFNG
VIDACGKGGEWQRALILLQNMEKVGVSPNQVSYNSALDACGKGGRADKAI
DLLTQMEVDGCEPGLITYNAAIYACARGGNHRKAAELLQEMNARGMPPNT
ISYNSAIYACGRGGEWQLALDLLDLMRKSGLTPDTFSFNTAIAACARAGD
WRRALDLLAGMKVEGLPPDIFSYNAAIGACAKGGQWMIGLELLAKVREDP
KLEATERTYTAAINCFQHYTPGVKVASLDSTMAGYEPPASDGHSIWTPKK
MMARDEKSSQLPPLESSDELF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long