prot_F-serratus_M_contig791.19196.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig791.19196.1
Unique Nameprot_F-serratus_M_contig791.19196.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1239
Homology
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BLAST of mRNA_F-serratus_M_contig791.19196.1 vs. uniprot
Match: D7G540_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G540_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 3.110e-12
Identity = 55/141 (39.01%), Postives = 77/141 (54.61%), Query Frame = 0 
Query:  710 WRGQMDARKMAKSARAHRKIITQSVGQILSQLHLGEQKAKSTF-----FAYSDEERLEGYGGGEDFHRSPQTSVVE----------------PLLAGDDYTTLQNNHPSQQLVKAGAELARLNRPEQAVVVLGKATEKLRN 829
            W+GQ+ AR++AK A+A +  I+ +V +IL Q+H     ++           S E+R+E  G  ED +    +S                   P +  DD+TTL ++HPSQQL+KAG EL R  RPEQAVVV G+A E LRN
Sbjct:  193 WKGQVTAREVAKKAKAQQLRISNTVVRILGQIHPDNVPSRPPTQRPDTSGASAEDRVEVDGTKEDENEVASSSSXXXXXXXXXXXXXXXXPAPTVTPDDFTTLASDHPSQQLLKAGKELMRQKRPEQAVVVWGQAAEILRN 333
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig791.19196.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G540_ECTSI3.110e-1239.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1206..1226
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1193..1226
score: 8.621
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 889..922
score: 6.402
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1193..1226
score: 8.29
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 797..917

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig791contigF-serratus_M_contig791:25063..49670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig791.19196.1mRNA_F-serratus_M_contig791.19196.1Fucus serratus malemRNAF-serratus_M_contig791 24316..74119 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig791.19196.1 ID=prot_F-serratus_M_contig791.19196.1|Name=mRNA_F-serratus_M_contig791.19196.1|organism=Fucus serratus male|type=polypeptide|length=1239bp
MERSLRSMHASSVDDGITVQTCLQAVARTCIFTNAVNTRRLTYGEFTCFI
VAMSQQEADINEGWRKAALHGTARQDAIAMGEAMQLFMTKLESVHPLLSK
DAVRRQRRRQHEKDSVVGSMSLSLSNGAPASYPGISCPTLPRSVSTTKRL
IRRNIFAALSVAKKLSRFRRRVPTGASQQDPRSSAGTTKTNPTTSHTSPS
HVDGDRRSVEIGNIRESSTQIRTQICAKVRQPTLDLRAADRGDSGSGSLE
LRESPSPRGKSYPIGQRFSSKQSMRDSSCYSAGVDPVSRVAEAVSLTPSS
SDSDSGPDVREAREEDNPRVDLRRKLDSILREVFARYAALEPKENVEDNI
QATVPVVPPAPLVSVDGLMLFIGDTHVFPKLRLEDIETAVIEEMGHQELN
SGQDQGLIQQEGGVANAELGVGLSADEFVRVCLKLMRDNFLVTRVRTLDS
NEREKEWLKRHSGTTEHQRLLQRLQAWVEHYRLPPRISCFKRDTEAESGA
IIGGGRRERKHPSAIASRPGSCLIDMWTGRVVARNPVEVDDNADRVFMEH
MDDMILDMAVPAPASRARDIGNISFPGEVEARNHVPNGFCATRNGAAVAL
SVGPSADHVSLASTSAIDDADDAHSGFIMTMAKSEGKHDMEGVLVNKGDS
AYVLGGDRGTSYAAAVTGVNDEQVPDGKTFGRKGQSSSNTPVPPATTHTN
ASKQTGTRSWRGQMDARKMAKSARAHRKIITQSVGQILSQLHLGEQKAKS
TFFAYSDEERLEGYGGGEDFHRSPQTSVVEPLLAGDDYTTLQNNHPSQQL
VKAGAELARLNRPEQAVVVLGKATEKLRNVHMVDPHQKLGTILMLSSALE
RLGRFKDVPSLLVEAVEAVYIIAGREQSCRSSKNDLMVATVMGKLGWAYI
AAHDFERALETFRSMHESIQIQKVKAKSSSSSSCLSSASASSERRHRDRH
TERGENTMGPRSPIVSHPSSWRREEMAAIALCWGAKRGTTTALLGLYRGR
EALLEAEHTVEFANKLSEPAVQAESEGLAGRAWRTIGETIGQDLRRRETY
SALKAFSVRKRKWQERKQKDDEKHTSLSQTNSEAEAEAKSDSDGQANGSD
DSKDGAATTKLSFLATNLSAGGGVGQTEYNEAPVTTSERPQLEGGQRIHD
RLASLRKGARCFRRQLTLLKGADRSGPLLLKVEPEVNVTTIALRALMELG
QTALDLGEAEAAMGAFKRRLRLAEEKAKSYFRCHMLTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf