prot_F-serratus_M_contig790.19190.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig790.19190.1
Unique Nameprot_F-serratus_M_contig790.19190.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length184
Homology
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BLAST of mRNA_F-serratus_M_contig790.19190.1 vs. uniprot
Match: D8LIH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIH0_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 6.450e-91
Identity = 134/180 (74.44%), Postives = 145/180 (80.56%), Query Frame = 0 
Query:    7 RIVVAWLALATL-APQSTLAQEMPGKGMTCWDKRELCDLNCVFATTHEGEA-GLTSCSTGCMEKHAACTDSDETLEYISCAKECTLTYDSSLTKCNQKVSDTTKNTYGANLDACANIASGIMDDCMEDCYGQDRFNGWTPQNEEGRTTD-IDLPGIDEEVWRHPFRSAYTIYGRLRGETD 183
            R  VA LA+A L A     AQEMPGKGMTCWDKRELCDLNCV+ATT E E   LT CSTGC+   A+CTDS ETL Y+ CAK+CTLTYD SLTKCNQKVSD TKNTYGANLDACANIASGIMDDCMEDCYG+DRFNGWTP  EEG+  + IDLPG+D+ VWR PFRS   IYGRLRGE D
Sbjct:   10 RTAVAVLAVAALLASDCASAQEMPGKGMTCWDKRELCDLNCVYATTAEDEDFNLTDCSTGCVTSQASCTDSAETLAYVECAKDCTLTYDGSLTKCNQKVSDQTKNTYGANLDACANIASGIMDDCMEDCYGEDRFNGWTPMKEEGKDANGIDLPGLDDGVWRRPFRSESVIYGRLRGELD 189
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BLAST of mRNA_F-serratus_M_contig790.19190.1 vs. uniprot
Match: A0A835YM51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM51_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.420e-30
Identity = 65/167 (38.92%), Postives = 87/167 (52.10%), Query Frame = 0 
Query:   24 LAQEMPGKGMTCWDKRELCDLNCVFATTHEGEAG--------LTSCSTGCMEKHAACTDSDETLEYISCAKECTLTYDSSLTKCNQKVSDTTKNTYGANLDACANIASGIMDDCMEDCY-----GQDRFNGWTPQNEEGRTTDIDLPGIDEEVWRHPFRSAYTIYGR 177
            + QEMPGKGM C DK+ELC LNC+  +    +          L SC   C +    C D+ +  +YI CA  C  TYD +L  C Q  S TT  TYG + DACAN+A+  MD+CM  C+      QDR+  W+P+ E G      +  +    +R PFR    +YGR
Sbjct:   18 VGQEMPGKGMGCSDKQELCSLNCLLPSAGTMDLSGVTVTRDDLNSCLDVCDKDLTQCKDTPDNTKYIDCATVCAKTYDVALNACLQAASATTVGTYGTSQDACANLAAAPMDECMSACFYGADAAQDRYGAWSPEREAGHR----IASLPRGQFRRPFRDPDVVYGR 180
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig790.19190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIH0_ECTSI6.450e-9174.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YM51_9STRA2.420e-3038.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..183
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.881

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig790contigF-serratus_M_contig790:271565..300078 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig790.19190.1mRNA_F-serratus_M_contig790.19190.1Fucus serratus malemRNAF-serratus_M_contig790 271357..301010 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig790.19190.1 ID=prot_F-serratus_M_contig790.19190.1|Name=mRNA_F-serratus_M_contig790.19190.1|organism=Fucus serratus male|type=polypeptide|length=184bp
MELWARRIVVAWLALATLAPQSTLAQEMPGKGMTCWDKRELCDLNCVFAT
THEGEAGLTSCSTGCMEKHAACTDSDETLEYISCAKECTLTYDSSLTKCN
QKVSDTTKNTYGANLDACANIASGIMDDCMEDCYGQDRFNGWTPQNEEGR
TTDIDLPGIDEEVWRHPFRSAYTIYGRLRGETD*
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