prot_F-serratus_M_contig79.19162.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig79.19162.1
Unique Nameprot_F-serratus_M_contig79.19162.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length167
Homology
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BLAST of mRNA_F-serratus_M_contig79.19162.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.230e-21
Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0 
Query:    9 TSGVMSGPDA---LFLLGQLRDMIISTTQKMGGEDAMVGKNAMEILRQWC---VSNCSFEEVFNSVRGMLPATA-PHRNMLDRPLDWNATMIIPKQLRQVWKAMFVDGDGNCMWRSVGKALWDSDQFWPQLKLVVLGWAAANAETLVGDEGVLF 155
            T GVM+   A   L  LG     +++ T +    +    K  +   R++     + C++ +VF +  G++P  A P +       D  ATMI+  +LR+ + A++V+GDGNC WRS+ KALW +D++W QLKL VL W+A N E LVG+ G LF
Sbjct:    4 TRGVMTDTLASRNLSRLGSAALGVVNNTSQRARRENAGAKGRIPSQREYLRAIAAECTWPKVFGTPEGVVPTVARPGKGQ--EMYDPKATMILTPELRKTFVALWVEGDGNCFWRSMAKALWGTDEYWRQLKLAVLAWSAVNVEALVGEGGALF 155
[Close]
BLAST of mRNA_F-serratus_M_contig79.19162.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 4.710e-15
Identity = 36/67 (53.73%), Postives = 48/67 (71.64%), Query Frame = 0 
Query:   99 RQVWKAMFVDGDGNCMWRSVGKALWDSDQFWPQLKLVVLGWAAANAETLVGDEGVLFRCKKFYSQDV 165
            ++ W A++V GDGNC WRS+ K LW+SD++W QLKLVVL WAAA+AE LV +  VL      +S D+
Sbjct:    3 KEGWVALWVRGDGNCCWRSLAKCLWESDEYWSQLKLVVLAWAAAHAEELVSEGRVLSDFSLHFSDDI 69
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig79.19162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJS4_9PHAE1.230e-2137.01SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K454_9PHAE4.710e-1553.73SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig79contigF-serratus_M_contig79:294501..295972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig79.19162.1mRNA_F-serratus_M_contig79.19162.1Fucus serratus malemRNAF-serratus_M_contig79 294501..296135 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig79.19162.1 ID=prot_F-serratus_M_contig79.19162.1|Name=mRNA_F-serratus_M_contig79.19162.1|organism=Fucus serratus male|type=polypeptide|length=167bp
MSRQTRKKTSGVMSGPDALFLLGQLRDMIISTTQKMGGEDAMVGKNAMEI
LRQWCVSNCSFEEVFNSVRGMLPATAPHRNMLDRPLDWNATMIIPKQLRQ
VWKAMFVDGDGNCMWRSVGKALWDSDQFWPQLKLVVLGWAAANAETLVGD
EGVLFRCKKFYSQDVVQ
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