prot_F-serratus_M_contig79.19156.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig79.19156.1
Unique Nameprot_F-serratus_M_contig79.19156.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length138
Homology
BLAST of mRNA_F-serratus_M_contig79.19156.1 vs. uniprot
Match: A0A6H5KKS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS1_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 6.690e-25
Identity = 59/139 (42.45%), Postives = 83/139 (59.71%), Query Frame = 0
Query:   14 NEGCACLSWIPGHDSLLAAGMADRYLRILDIR-----SKDNAVKTVEAHRGAVNGVAVRCPDSRVLATWSYTPGEPVKIWDVRKLQD---------GLTALTMPHTVATLRARSASS-VIDVAWCPGRVDRIATVHSDN 137
            NEG   L+W+PG DS+L AG   ++L+ +D+R     S ++ ++ +E H+G V G+AV   D R++ATWS + GEPVK+W  R L              A    + VATLR    +S V+DVAWCP R D IATVHS++
Sbjct:  726 NEGYVSLAWLPGTDSVLLAGTGSKFLKSIDVRGRGADSSNSVLRIMEVHKGGVVGIAVLPEDPRIVATWSDSAGEPVKLWKSRSLVGRNAGGGNVKARDASQSSNPVATLRPPDKTSFVVDVAWCPSRNDLIATVHSND 864          
BLAST of mRNA_F-serratus_M_contig79.19156.1 vs. uniprot
Match: D7G6M1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M1_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 3.780e-14
Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = 0
Query:   14 NEGCACLSWIPGHDSLLAAGMADRYLRILDIRSK-DNAVK----------TVEAHRGAVNGVAVRCPDSRVLATWSYTPGEPVKIWDVRKL--QDG-------LTALTMPHTVATLRARSASS-VIDV 120
            NEG A L+W+PG DS+L AG   ++L+ +D+R + D+A++          T+E H+G V  +AV   D R++ATWS + GEPVK+W  R L  ++G         A    + VATLR    +S V+D+
Sbjct:  312 NEGYASLAWLPGTDSVLLAGTGSKFLKSIDVRGRGDDALRSADSSNVVPRTMEVHKGGVIRIAVLPEDPRIVATWSDSVGEPVKLWKSRSLVGRNGGGGNVKARDASQSSNPVATLRPPDKTSFVVDI 439          
BLAST of mRNA_F-serratus_M_contig79.19156.1 vs. uniprot
Match: A0A7S4JSI5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JSI5_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 3.880e-5
Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 0
Query:    9 YKQQFNEGCACLSWIPGHDSLLAAGMADRYLRILDIR-SKDNAVK-TVEAHRG-AVNGVAVRCPDSRVLATWSYTPGEPVKIWDVRKL 93
            Y+   N G A LSW+     LLA G   R L++ D+R S  NA   +V AH   AV+G+      + + AT+S   GEPVK+WD R++
Sbjct:   41 YRFAHNSGVASLSWL-SDGQLLAVGTQHRSLQLYDLRTSGSNAPHVSVYAHTSDAVSGIEPDPHRTHIFATFSRGAGEPVKLWDARRM 127          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig79.19156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KKS1_9PHAE6.690e-2542.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6M1_ECTSI3.780e-1438.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4JSI5_9STRA3.880e-539.77Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..137
e-value: 2.6E-18
score: 68.3
NoneNo IPR availablePANTHERPTHR22850WD40 REPEAT FAMILYcoord: 20..136
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 7..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig79contigF-serratus_M_contig79:188748..198660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig79.19156.1mRNA_F-serratus_M_contig79.19156.1Fucus serratus malemRNAF-serratus_M_contig79 188743..198660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig79.19156.1 ID=prot_F-serratus_M_contig79.19156.1|Name=mRNA_F-serratus_M_contig79.19156.1|organism=Fucus serratus male|type=polypeptide|length=138bp
MAATSTWDYKQQFNEGCACLSWIPGHDSLLAAGMADRYLRILDIRSKDNA
VKTVEAHRGAVNGVAVRCPDSRVLATWSYTPGEPVKIWDVRKLQDGLTAL
TMPHTVATLRARSASSVIDVAWCPGRVDRIATVHSDNP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf