prot_F-serratus_M_contig7807.19064.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig7807.19064.1
Unique Name	prot_F-serratus_M_contig7807.19064.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	54

Homology

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BLAST of mRNA_F-serratus_M_contig7807.19064.1 vs. uniprot
Match: A0A6H5JPN1_9PHAE (CRAL-TRIO domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN1_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 4.300e-5
Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 0

Query:   28 VGVCLTQPCVLDDGFFLEGGSRIL 51
            VGVCLT+PCVLD GFFLEGG R+L
Sbjct: 1052 VGVCLTEPCVLDVGFFLEGGHRVL 1075

[Close]

BLAST of mRNA_F-serratus_M_contig7807.19064.1 vs. uniprot
Match: D8LI57_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI57_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 4.310e-5
Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 0

Query:   28 VGVCLTQPCVLDDGFFLEGGSRIL 51
            VGVCLT+PCVLD GFFLEGG R+L
Sbjct: 1184 VGVCLTEPCVLDVGFFLEGGHRVL 1207

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig7807.19064.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig7807.19064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JPN1_9PHAE	4.300e-5	83.33	CRAL-TRIO domain-containing protein (Fragment) n=1...	[more]
D8LI57_ECTSI	4.310e-5	83.33	CRAL-TRIO domain-containing protein n=1 Tax=Ectoca...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..54
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..19
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..24 score: 0.488

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig7807	contig	F-serratus_M_contig7807:9687..10140 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig7807.19064.1	mRNA_F-serratus_M_contig7807.19064.1	Fucus serratus male	mRNA	F-serratus_M_contig7807 9687..10141 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig7807.19064.1 ID=prot_F-serratus_M_contig7807.19064.1|Name=mRNA_F-serratus_M_contig7807.19064.1|organism=Fucus serratus male|type=polypeptide|length=54bp
RGDRRDGLLRLLVTYLAAAPLARSVHEVGVCLTQPCVLDDGFFLEGGSRI
LALA