prot_F-serratus_M_contig78.19057.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig78.19057.1
Unique Nameprot_F-serratus_M_contig78.19057.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length308
Homology
BLAST of mRNA_F-serratus_M_contig78.19057.1 vs. uniprot
Match: A0A6H5JAC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC8_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 6.170e-104
Identity = 157/253 (62.06%), Postives = 193/253 (76.28%), Query Frame = 0
Query:   60 RPWRERAPLILAARS---PDDFIDTTATEEEDSSCFGVEFERQELRVIFEAMDKKNVFYKMLSVDQITEILQLAQALLSVKQTAADISKLLQGDAIKGKWKLEFSTEEPLLRLLPQLLPSATDIYNYVYDGARGGRLDNIIRFYKSWILKSVRAVTKYRMEAQGKVVFEFERIEANILGFKIPLPKFASEAGFVEVQYFDGDLWIETFDAP--MVDKNETMTVLNIYRRVGDLTEEDKTSIPERTGEQGRPQR 307
            R W   +   +A      PDDFIDTTA +E  S C  V+FERQELRVIFE MDK N+FYKML+ +QI EILQL QALLSVK+   DISKL QGD +KGKWKL+FSTEE       + LP  +D+YNY+YDG  GGRLDN++RFYKSW +KS+RAVT Y+M+ +GK+ FEF+RIEA++ GFK+PLP F +++GFVEVQYFDGDLWIE F+A   M +  +T TV+NIYRR+GD TEEDK  +PERTGEQ +PQR
Sbjct:   57 RGWHASSSSAMAKMGGVPPDDFIDTTAEDEPGSECLAVDFERQELRVIFETMDKNNIFYKMLAEEQIVEILQLTQALLSVKKMPQDISKLCQGDMMKGKWKLDFSTEERY-----KFLPPTSDVYNYIYDGGGGGRLDNVLRFYKSWAVKSIRAVTTYKMDDRGKISFEFDRIEADLFGFKVPLPNFYADSGFVEVQYFDGDLWIEAFEADTTMTESGKT-TVVNIYRRIGDATEEDKVHVPERTGEQRQPQR 303          
BLAST of mRNA_F-serratus_M_contig78.19057.1 vs. uniprot
Match: D7FT93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT93_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 4.910e-78
Identity = 121/185 (65.41%), Postives = 148/185 (80.00%), Query Frame = 0
Query:  125 EILQLAQALLSVKQTAADISKLLQGDAIKGKWKLEFSTEEPLLRLLPQLLPSATDIYNYVYDGARGGRLDNIIRFYKSWILKSVRAVTKYRMEAQGKVVFEFERIEANILGFKIPLPKFASEAGFVEVQYFDGDLWIETFDAP--MVDKNETMTVLNIYRRVGDLTEEDKTSIPERTGEQGRPQR 307
            EILQL QALLSVK+   DISKL QGD +KGKWKL+FSTEE       + LP  +D+YNY+YDGA GGRLDN++RFYKSW +KSVRAVT Y M+ +GK+ FEF+RIEA++ GFK+PLP F ++AGFVEVQYFDGDLWIE F+A   M +  +T TV+NIYRR+GD TEEDK  +PERTGEQ +P+R
Sbjct:   41 EILQLTQALLSVKKMPQDISKLCQGDIMKGKWKLDFSTEERY-----KFLPPTSDVYNYIYDGAGGGRLDNVLRFYKSWAVKSVRAVTNYNMDDRGKISFEFDRIEADLFGFKVPLPNFNADAGFVEVQYFDGDLWIEAFEADTTMTESGKT-TVVNIYRRIGDATEEDKVRVPERTGEQRQPRR 219          
BLAST of mRNA_F-serratus_M_contig78.19057.1 vs. uniprot
Match: A0A836CE93_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE93_9STRA)

HSP 1 Score: 157 bits (396), Expect = 3.610e-43
Identity = 78/202 (38.61%), Postives = 122/202 (60.40%), Query Frame = 0
Query:   93 GVEFERQELRVIFEAMDKKNVFYKMLSVDQITEILQLAQALLSVKQTAADISKLLQGDAIKGKWKLEFSTEEPLLRLLPQLLPSATDIYNYVYDGARGGRLDNIIRFYKSWILKSVRAVTKYRMEAQGKVVFEFERIEANILGFKIPLPKFASEAGFVEVQYFDGDLWIETFDAPMVDKNETMTVLNIYRRVGDLTEEDKTS 294
            G EFERQEL+VIF  M++ ++ ++ L  +Q   I      +L+          ++ GD + GKW+LE+STE+       ++LP  +D+Y YVYD  +GGRLD I+ F +S I+KS++ +  Y +   G + F F++   +I GF +P+P F +   F+E+QYFDGDLW+E FD P  +       +N+YR++G LTE DK +
Sbjct:   18 GAEFERQELKVIFRTMEENDIHFQQLGPEQTDTIQAYVDKILAAGSPMTP-KAVVAGDGLVGKWRLEYSTEQKY-----KILPPGSDVYTYVYD-PKGGRLDTILMFPRSPIVKSIQVICDYTISTNGVLDFVFKKTIVDIFGFSLPVPTFGTPNAFLEMQYFDGDLWMEQFDEPAPNGEGVKKSVNVYRKIGSLTEADKAA 212          
BLAST of mRNA_F-serratus_M_contig78.19057.1 vs. uniprot
Match: W7TQ26_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ26_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.960e-15
Identity = 63/210 (30.00%), Postives = 104/210 (49.52%), Query Frame = 0
Query:   96 FERQELRVIFEAMDKKNVFYKMLSVDQITEILQLAQALLSVKQTAADISKLLQGDAIKGKWKLEFSTEEPLLRLLPQLLPSATDIYNYVYDGARGGRLDNIIRFYKSWILKSVRAVTKYRMEAQGKVVFEFERIEANILG-------FKIPLPKFASEAG--FVEVQYFDGDLWIETFDAPMVDKNETMTVLNIYRRVGDLTEEDKTSIP 296
            FE QEL    + M++K V   ML+ +    +++ A AL++       +  L   +A+ G+WKL F+TEE       ++LP  T +Y +++   R GRL+N+++F   +    + + T Y +  QG+++FEF     +I         +KIPLP      G  F +V Y DG LWIE    P  ++      + IY   G +  E++T  P
Sbjct:  100 FEWQELVCCLKFMEEKEVNAGMLAPETRDMMIEYADALIAGGSPVRTLEGL--AEAMMGRWKLAFTTEERY-----KILPPGTRVYYHIH---RDGRLENVMKFKDKYWDSLISSAT-YNLTPQGRLLFEFSSNRVHINNPFQARAQWKIPLPPNVGNTGSAFADVSYMDGVLWIEKIRDPGTEQ----VFVTIYEYQGPIEGEERTPSP 294          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig78.19057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JAC8_9PHAE6.170e-10462.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT93_ECTSI4.910e-7865.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CE93_9STRA3.610e-4338.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TQ26_9STRA6.960e-1530.00Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 119..229
e-value: 2.2E-6
score: 27.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..307
NoneNo IPR availableTMHMMTMhelixcoord: 9..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig78contigF-serratus_M_contig78:892855..914587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig78.19057.1mRNA_F-serratus_M_contig78.19057.1Fucus serratus malemRNAF-serratus_M_contig78 892815..914878 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig78.19057.1 ID=prot_F-serratus_M_contig78.19057.1|Name=mRNA_F-serratus_M_contig78.19057.1|organism=Fucus serratus male|type=polypeptide|length=308bp
MNSLPLKVFLILNVLIALLEIVLGWTLLPGGNMIRYSCNSAACSRRLLGA
AVQSGTKAHRPWRERAPLILAARSPDDFIDTTATEEEDSSCFGVEFERQE
LRVIFEAMDKKNVFYKMLSVDQITEILQLAQALLSVKQTAADISKLLQGD
AIKGKWKLEFSTEEPLLRLLPQLLPSATDIYNYVYDGARGGRLDNIIRFY
KSWILKSVRAVTKYRMEAQGKVVFEFERIEANILGFKIPLPKFASEAGFV
EVQYFDGDLWIETFDAPMVDKNETMTVLNIYRRVGDLTEEDKTSIPERTG
EQGRPQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom