prot_F-serratus_M_contig779.19028.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig779.19028.1
Unique Nameprot_F-serratus_M_contig779.19028.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length115
Homology
BLAST of mRNA_F-serratus_M_contig779.19028.1 vs. uniprot
Match: D7FH71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH71_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.300e-28
Identity = 66/116 (56.90%), Postives = 77/116 (66.38%), Query Frame = 0
Query:    4 SHGH----SDMSSHDHSMSSMGMDEPFCEGEGRVMLSGFQEASGAGASCVLFLFQNAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGAREKSVTLDLMRTFAFAVQMLIAY 115
            SH H    SD SS   SM+ MG  + FCEG+G VML GFQ A+ A   C+LFLF+ A VDT+ KYA A +GAFCMGFANEMIRY R  M + A    V  D+  TFAFAVQM +AY
Sbjct:   29 SHDHGSHSSDASSMASSMTDMG--DQFCEGDGTVMLMGFQAATSASVRCILFLFEGAGVDTKTKYAFAALGAFCMGFANEMIRYGRDRMAK-ASGVCVGSDVKATFAFAVQMFLAY 141          
BLAST of mRNA_F-serratus_M_contig779.19028.1 vs. uniprot
Match: D7FWU3_ECTSI (Copper transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWU3_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.550e-24
Identity = 51/92 (55.43%), Postives = 65/92 (70.65%), Query Frame = 0
Query:   24 EPFCEGEGRVMLSGFQEASGAGASCVLFLFQNAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGAREKSVTLDLMRTFAFAVQMLIAY 115
            + FC G+G VML GFQ A+ A  +C+LFLF+ A VDT+ KYA A +GAF MGFANEMIRY R  M + + + S+  DL  T AFAVQ+ +AY
Sbjct:   24 DQFCNGDGTVMLMGFQSATSASVNCILFLFEGAGVDTKTKYAFAALGAFFMGFANEMIRYGRDRMAKTS-DVSLASDLKMTAAFAVQIYLAY 114          
BLAST of mRNA_F-serratus_M_contig779.19028.1 vs. uniprot
Match: A9UVZ5_MONBE (Copper transport protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UVZ5_MONBE)

HSP 1 Score: 75.9 bits (185), Expect = 6.550e-15
Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 0
Query:   26 FCEGEGRVMLSGFQEASGAGASCVLFLFQNAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGAREKSVTLDLMRTFAFAVQMLIAY 115
            FC G G VM  GF  A    + C +FLF N V+DT  KYAIA+IG FCMG  NE+ R++R  +      + +  DL    ++ + ML AY
Sbjct:   14 FCSGSGMVMNDGFGRAP---SFCPIFLFHNVVIDTAGKYAIALIGTFCMGLFNELFRWYRNRLEAQESTRPILQDLCVALSYGIHMLNAY 100          
BLAST of mRNA_F-serratus_M_contig779.19028.1 vs. uniprot
Match: A0A835YQY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQY3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.630e-10
Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:   26 FCEGEGRVMLSGFQEASGAGASCVLFLFQNAVVDTEAKYAIAVIGAFCMGFANEMIRYWR 85
            FC G G VM +GFQ  S    SCV++LF  A++DTE KYA AVIG F + F NE +R+ R
Sbjct:   29 FCTGSGTVMQNGFQ-TSFTNGSCVIWLFPGAILDTEGKYAAAVIGTFLLAFGNEGLRWLR 87          
BLAST of mRNA_F-serratus_M_contig779.19028.1 vs. uniprot
Match: A0A0L0D9P1_THETB (Copper transport protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D9P1_THETB)

HSP 1 Score: 61.6 bits (148), Expect = 3.080e-9
Identity = 42/117 (35.90%), Postives = 57/117 (48.72%), Query Frame = 0
Query:   26 FCEGEGRVMLSGFQEASGA-----GASCVLFLFQNAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGAREKSVT----------------------LDLMRTFAFAVQMLIAY 115
            FC+G GRVM+ GFQ          G SC+L+LFQ AVVDT  KYA+A IG+F +  A   ++  R  +   A  +S +                      LDL     FA+QM++AY
Sbjct:    2 FCKGMGRVMMPGFQTTYNPSKMIEGNSCILWLFQGAVVDTPGKYALACIGSFSLVLAMVFLQLVRERVSLWASRRSSSXXXXXXXXXXPSLCSGGLPMLGLDLAVAALFALQMVLAY 118          
BLAST of mRNA_F-serratus_M_contig779.19028.1 vs. uniprot
Match: A0A819HB45_9BILA (Copper transport protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A819HB45_9BILA)

HSP 1 Score: 59.7 bits (143), Expect = 7.920e-9
Identity = 31/86 (36.05%), Postives = 47/86 (54.65%), Query Frame = 0
Query:   32 RVMLSGFQEASGAGASCVLFLFQNAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGAREKSVTL--DLMRTFAFAVQMLIAY 115
            RVM +GFQ A+G    C++FLF    V+   KYA+ ++G FCMG  N  + Y R  +    RE S  L   +     + +Q+++AY
Sbjct:    5 RVMQNGFQFATGKDR-CIVFLFHGWNVNNHVKYAVMIVGIFCMGLLNGALAYIRHRLNENTRENSSLLLNQIYLALVYGIQIVLAY 89          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig779.19028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FH71_ECTSI1.300e-2856.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWU3_ECTSI1.550e-2455.43Copper transport protein n=2 Tax=Ectocarpus TaxID=... [more]
A9UVZ5_MONBE6.550e-1542.22Copper transport protein n=1 Tax=Monosiga brevicol... [more]
A0A835YQY3_9STRA1.630e-1053.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0L0D9P1_THETB3.080e-935.90Copper transport protein n=1 Tax=Thecamonas trahen... [more]
A0A819HB45_9BILA7.920e-936.05Copper transport protein n=1 Tax=Rotaria sp. Silwo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 115..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..114
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..84
NoneNo IPR availableTMHMMTMhelixcoord: 64..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig779contigF-serratus_M_contig779:3442..19772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig779.19028.1mRNA_F-serratus_M_contig779.19028.1Fucus serratus malemRNAF-serratus_M_contig779 3442..19772 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig779.19028.1 ID=prot_F-serratus_M_contig779.19028.1|Name=mRNA_F-serratus_M_contig779.19028.1|organism=Fucus serratus male|type=polypeptide|length=115bp
MDDSHGHSDMSSHDHSMSSMGMDEPFCEGEGRVMLSGFQEASGAGASCVL
FLFQNAVVDTEAKYAIAVIGAFCMGFANEMIRYWRGVMGRGAREKSVTLD
LMRTFAFAVQMLIAY
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