prot_F-serratus_M_contig774.18999.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig774.18999.1
Unique Nameprot_F-serratus_M_contig774.18999.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length424
Homology
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BLAST of mRNA_F-serratus_M_contig774.18999.1 vs. uniprot
Match: A0A6H5KWX2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX2_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 2.020e-48
Identity = 114/240 (47.50%), Postives = 155/240 (64.58%), Query Frame = 0 
Query:    1 MVADFQAFAGYCTAVSLYRESLGTFNKSLHYADVQGASAGDLEP-LKLSVARTTAKLGMLLVKHGSIKKALSCSRKSLVFM----GTEGMADPNSSARGGDSKTHTHHVVVASLYSVAEALTRSTNVEEAQGLYEATATILRNMYGNDASLCMEARGKEKLASMMVASGRADQAIA---LNEQSLLDVTKAFGEVHPVMARVMHQRGVLLQSQAKLGGARECFRKALQIREAFFGSGHAL 232
            MVAD+QA+   C A  LYRES+ + ++SL    +QGA +G LE  +K ++ R T KLG LL+K G    AL+   +SL  +    GT     P  S+  G S    H  VV SL S+AEAL +  +V+EA+G+YE  A ILR +YG+D SLC+E RG E+LASMM+ +GRAD+A     LN++ L   TKAFG+VHPV+ARV+ Q+G +L ++  L GA   F +A +IREAF+G GHAL
Sbjct:  457 MVADYQAYRRCCDATPLYRESIDSLHQSLELVRIQGAGSGPLESRIKRALERITGKLGALLLKQGKHMDALNPCAESLTLIRARQGTN--LGPEGSSNLGRSHLP-HQDVVDSLCSMAEALMKGNSVDEAEGMYEEAAIILRRLYGDDESLCLETRGIEQLASMMLEAGRADKAGGKSHLNDRCLSKATKAFGDVHPVVARVIDQKGRILLAEKDLDGAASWFAEARKIREAFYGKGHAL 693
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BLAST of mRNA_F-serratus_M_contig774.18999.1 vs. uniprot
Match: D7G1G8_ECTSI (Kinesin light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G8_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 3.700e-27
Identity = 85/234 (36.32%), Postives = 117/234 (50.00%), Query Frame = 0 
Query:    1 MVADFQAFAGYCTAVSLYRESLGTFNKSLHYADVQGASAGDLEP-LKLSVARTTAKLGMLLVKHGSIKKALSCSRKSLVFMGTEGMADPNSSARGGDSKTHT-HHVVVASLYSVAEALTRSTNVEEAQGLYEATATILRNMYGNDASLCMEARGKEKLASMMVASGRADQAIALNEQSLLDVTKAFGEVHPVMARVMHQRGVLLQSQAKLGGARECFRKALQIREAFFGSGHAL 232
            MVAD+QA+   C A  LYRES+ + ++SL    +QG  +G LE  +K ++ R T KLG LL+K G  + AL    +SL  +      D          ++H  H  VV SL S+AEAL R  +V+EA+                                             LNE+ L + TKAFG+VHPV+ARV+ Q+G +L ++  L GA   F +A QIREAF+G GHAL
Sbjct:  384 MVADYQAYRRCCDATPLYRESIDSLHQSLELVSIQGTGSGALESRIKRALERITGKLGALLLKQGKHRDALHPCAESLTLIRARQGTDLGPEGSSSLGRSHLPHQDVVDSLCSMAEALMRGNSVDEAE--------------------------------------------ELNERCLSEATKAFGDVHPVVARVIDQKGRILLAEKDLDGAASWFAEARQIREAFYGKGHAL 573
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig774.18999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWX2_9PHAE2.020e-4847.50NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G1G8_ECTSI3.700e-2736.32Kinesin light chain n=1 Tax=Ectocarpus siliculosus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 153..260
e-value: 5.3E-13
score: 51.2
coord: 4..152
e-value: 2.9E-6
score: 29.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 105..225
NoneNo IPR availablePFAMPF13424TPR_12coord: 155..224
e-value: 2.4E-9
score: 37.3
NoneNo IPR availablePANTHERPTHR46082FAMILY NOT NAMEDcoord: 36..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig774contigF-serratus_M_contig774:303869..309823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig774.18999.1mRNA_F-serratus_M_contig774.18999.1Fucus serratus malemRNAF-serratus_M_contig774 299141..311220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig774.18999.1 ID=prot_F-serratus_M_contig774.18999.1|Name=mRNA_F-serratus_M_contig774.18999.1|organism=Fucus serratus male|type=polypeptide|length=424bp
MVADFQAFAGYCTAVSLYRESLGTFNKSLHYADVQGASAGDLEPLKLSVA
RTTAKLGMLLVKHGSIKKALSCSRKSLVFMGTEGMADPNSSARGGDSKTH
THHVVVASLYSVAEALTRSTNVEEAQGLYEATATILRNMYGNDASLCMEA
RGKEKLASMMVASGRADQAIALNEQSLLDVTKAFGEVHPVMARVMHQRGV
LLQSQAKLGGARECFRKALQIREAFFGSGHALTKLAKVRVDGRIKRLKTA
DEEMSQNDVELQEEWLHITRDGAVRVLQLLAVDSNPHQLSVDSNPHQLSS
HHRPTLGWRSLAQRVHLFRLHREDRLRNTRHSRMSRAELDGASWSSYSDP
KSLPNNLGINQPFVLHHSVRSTAVPRLRLWSARTQRGCELLREKLLYCCC
VKYIIHPHSTLFLNFLKYLFLHY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf