prot_F-serratus_M_contig773.18990.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig773.18990.1
Unique Nameprot_F-serratus_M_contig773.18990.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length435
Homology
BLAST of mRNA_F-serratus_M_contig773.18990.1 vs. uniprot
Match: D7FVC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC5_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 2.140e-68
Identity = 152/398 (38.19%), Postives = 222/398 (55.78%), Query Frame = 0
Query:    4 EPEVWHPSVLLGDFLNQIGSLQQLVDMTRTPKLGSFDRDTVRRAMGWGLYVEQVIGSLTSDSQRDSLVRGLEAGPKAHHPQATTLSRLRQARSWVLQSMLGSAFLADHPKPQSLLRWIMEEYLEVVLGKGLDQVGPQQSVESLCKFIGDATDVVKSSGNTAALSHTFSTLSVCSMVADYDECRALVESEVPFGKQRKRRREPSTYDTSVETAQKRAYATNSYRILLSKVLTVKRDHRDHRGDRQER---AADEGTSFIVKMASLAISDVLVLEVMCLMLLEPWRTSGVGKCASVTSVSSAMKSSDTPTATKM---LLDQVIAFRGDERLWSLDPWLLDEVSKHYSVFADVYATHLLTSLIKVRRGLDQGNGALTDYLVSERETAKSRLIALSSRGGKL 395
            E + WH +V L +F+  + + + LVD T+T +LG+ D++ +++ MGWGL++EQV+G L +DSQRDSL R L    +A       L RL QAR WVL+SMLGS FL DHP+P+SL+ WIM  Y E+   +     G +   +    F+ DA+ VVKS G+   +SH +S L +C       +  + + +    G   K  R P  Y+ SV+TAQKRAYA+N +  L S+           +GD Q +    A++ TSFI++++ LA +D++ LE++CL+LLEPWR +   + A   +  SA  S      T +   LL QV  F  D RLWSLD WLL E+S  +  FA  Y   L  S  ++ R  +    A +  L   +E  +SRL  L SR  +L
Sbjct:   61 EHKQWHSNVGLDEFVGHVLTFKSLVDSTQTRELGTVDKEQLKKMMGWGLFIEQVVGGLNTDSQRDSLARALGLSHRA------ILPRLYQARRWVLRSMLGSTFLVDHPRPESLVMWIMACYEELPPLQAHQDAGGE--TDQSASFVDDASAVVKSRGDVGVVSHAYSALLLC---GGGSKLASSISTRDAAGGGGKSTRVPCLYEMSVDTAQKRAYASNCFTFLSSRCA---------QGDGQHKHGVLAEQVTSFILELSELAQTDIVSLEILCLVLLEPWRQAT--RTAKHQAEDSACDSQQESLGTSLNGALLKQVEGFLDDARLWSLDEWLLGEISHRHESFARAYVEKLTRSREELVRR-EYLTSADSSGLCLRKEDVQSRLGVLCSRSERL 435          
BLAST of mRNA_F-serratus_M_contig773.18990.1 vs. uniprot
Match: A0A6H5K2R8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R8_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 4.790e-59
Identity = 149/429 (34.73%), Postives = 215/429 (50.12%), Query Frame = 0
Query:    4 EPEVWHPSVLLGDFLNQIGSLQQLVDMTRTPKLGSFDRDTVRRAMGWGLYVEQ--------------------------------VIGSLTSDSQRDSLVRGLEAGPKAHHPQATTLSRLRQARSWVLQSMLGSAFLADHPKPQSLLRWIMEEYLEVVLGKGLDQVGPQQSVESLCKFIGDATDVVKSSGNTAALSHTFSTLSVCSMVADYDECRALVESEVPFGKQRKRRREPSTYDTSVETAQKRAYATNSYRILLSKVLTVKRDHRDHRGDRQERAADEGTSFIVKMASLAISDVLVLEVMCLMLLEPWRTSG-VGKCASVTSVSSAMKSSDTPTATKMLLDQVIA----FRGDERLWSLDPWLLDEVSKHYSVFADVYATHLLTSLIKVRRGLDQGNGALTDYLVSERETAKSRLIALSSRGGKL 395
            E + WH SV L +F+  +   + LVD T+T +LG+ D++ + + MGWG+++EQ                                V+G L +DSQRDSL + L    +A       L RL QAR WVL+SMLGS FLADHP P+SLL W+M  Y E+   +     G +   +    F+ DA+ VVKS G+   +SH +S L +C       +  + + +    G   K    P  Y+ SV+TAQKRAYA+N +  L S+       H+          A++ TSFI++++ LA +D++ LE++CL+LLEPWR +    K  +  S   + + S   +    +L Q  A    F GD RLWSLD WLL E+S  Y  FA  Y   L  S  ++ R         T  L S +E  +SRL  L SR  +L
Sbjct:   31 EQKQWHSSVGLDEFVGHVLKFKSLVDSTQTRELGTVDKEQLDKIMGWGIFIEQEDRKRLKNKRGTIGASSSFPYSYSYRRLAFVQVVGGLNTDSQRDSLAQALGLSHRA------ILPRLYQARRWVLRSMLGSTFLADHPHPESLLMWVMACYEELPPLQAHQDAGGE--TDQPASFVNDASAVVKSRGDVGVVSHAYSALLLC---GGGSKLASSISTRDAAGDGGKSTSVPCLYEMSVDTAQKRAYASNCFTFLSSRCAQDDGQHK------HGVLAEQVTSFILELSELAQTDIVSLEILCLVLLEPWRQATCTAKHQAEGSACDSQQESLGTSLNAAVLKQASALVEGFLGDARLWSLDEWLLGEISHRYESFARAYVEKLTRSREELVRRECLTPADWTG-LCSRKEDVQSRLGVLCSRSERL 441          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig773.18990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVC5_ECTSI2.140e-6838.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2R8_9PHAE4.790e-5934.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035428Fanconi anemia group F proteinPFAMPF11107FANCFcoord: 18..147
e-value: 1.3E-6
score: 27.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig773contigF-serratus_M_contig773:199501..225402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig773.18990.1mRNA_F-serratus_M_contig773.18990.1Fucus serratus malemRNAF-serratus_M_contig773 199455..225500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig773.18990.1 ID=prot_F-serratus_M_contig773.18990.1|Name=mRNA_F-serratus_M_contig773.18990.1|organism=Fucus serratus male|type=polypeptide|length=435bp
MMHEPEVWHPSVLLGDFLNQIGSLQQLVDMTRTPKLGSFDRDTVRRAMGW
GLYVEQVIGSLTSDSQRDSLVRGLEAGPKAHHPQATTLSRLRQARSWVLQ
SMLGSAFLADHPKPQSLLRWIMEEYLEVVLGKGLDQVGPQQSVESLCKFI
GDATDVVKSSGNTAALSHTFSTLSVCSMVADYDECRALVESEVPFGKQRK
RRREPSTYDTSVETAQKRAYATNSYRILLSKVLTVKRDHRDHRGDRQERA
ADEGTSFIVKMASLAISDVLVLEVMCLMLLEPWRTSGVGKCASVTSVSSA
MKSSDTPTATKMLLDQVIAFRGDERLWSLDPWLLDEVSKHYSVFADVYAT
HLLTSLIKVRRGLDQGNGALTDYLVSERETAKSRLIALSSRGGKLGGLCR
LLSHTANTTGNLEIISSCVSAGELGTSNNSPHQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035428FANCF