prot_F-serratus_M_contig773.18985.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig773.18985.1
Unique Name	prot_F-serratus_M_contig773.18985.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	372

Homology

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BLAST of mRNA_F-serratus_M_contig773.18985.1 vs. uniprot
Match: D7FVC1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVC1_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 4.630e-70
Identity = 137/291 (47.08%), Postives = 188/291 (64.60%), Query Frame = 0

Query:   63 GGLVALAGAIWPWTTQKSLLAMVTLAAILRIAWTIIALLTWDASMGVISWLVDKSVHVTFYSLDYFQAAAAFTLYTILARFWAELAYTARHGNTPGRASGGADQYSRPEWTPIFLWNMTRAVPRAASTVAFTFATVATICMCTGWTSRPTYVDELTGFIEAGAYIIASVVLITTASCAIQELRMVPIELPSRRRRVYRITAVTGSVCACLLIRAMVLIWLVNRAVKLTTGWSMVWVVMYMGFLDALPLAIVLMYNRVAPLSMLSISGDRG-RGRVDPRH-APSEEV--PLI 349
            G ++A+  A  P+TTQK+LL+M+TL+A L IAW+++A   WD   G +   V  ++ V FY  D+F AA  FTLYTILA+FWA+LA++AR G    R  GG D+Y RP  TP  +W +TR V R +STV F  A +AT+      T    Y++  T ++E G +I+A+ V++T A  A+ ELR+VPIELP+RRRRV+R+ A+TGSV  CL++RA+VL+W   + + + T   M+ ++ Y   L ALP +IVL YNRV PLS  S SG RG  G V  R  AP EE   PLI
Sbjct:    3 GTVMAMLAAFRPFTTQKALLSMLTLSAALSIAWSVLAYEAWDLLHGTLDVSVSVALRVAFYGTDFFLAATTFTLYTILAKFWADLAFSARQGAGASRPLGGGDEY-RPRGTPTLIWKITRGVQRVSSTVVFAAAALATVFQAVLVTLDSMYLNLWTAYVEGGVFILAAFVMVTAAYYAVVELRLVPIELPTRRRRVFRVVAMTGSVAVCLVLRAVVLVWAAGKPIFVNTDLEMLALLGYWVLLVALPSSIVLAYNRVVPLS--SYSGGRGGTGNVSLRWTAPDEEEEEPLI 290

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig773.18985.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig773.18985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FVC1_ECTSI	4.630e-70	47.08	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31142:SF1	TOBAMOVIRUS MULTIPLICATION PROTEIN 1	coord: 16..326
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 284..294
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..31
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 127..145
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 32..80
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 220..241
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 295..316
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 146..186
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 209..219
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 261..283
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 242..260
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 81..103
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 104..126
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 187..208
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 317..371
None	No IPR available	TMHMM	TMhelix		coord: 123..145
None	No IPR available	TMHMM	TMhelix		coord: 187..209
None	No IPR available	TMHMM	TMhelix		coord: 10..32
None	No IPR available	TMHMM	TMhelix		coord: 219..241
None	No IPR available	TMHMM	TMhelix		coord: 293..315
None	No IPR available	TMHMM	TMhelix		coord: 261..283
None	No IPR available	TMHMM	TMhelix		coord: 81..103
IPR040226	THH1/TOM1/TOM3	PANTHER	PTHR31142	FAMILY NOT NAMED	coord: 16..326

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig773	contig	F-serratus_M_contig773:30698..34814 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig773.18985.1	mRNA_F-serratus_M_contig773.18985.1	Fucus serratus male	mRNA	F-serratus_M_contig773 28556..55078 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig773.18985.1 ID=prot_F-serratus_M_contig773.18985.1|Name=mRNA_F-serratus_M_contig773.18985.1|organism=Fucus serratus male|type=polypeptide|length=372bp
MSAAAFDLLLVAILVIFINGVLFCTSGLALLRVLRAAARDSYSSPRRRLL
ELDDSVVTRGDSGGLVALAGAIWPWTTQKSLLAMVTLAAILRIAWTIIAL
LTWDASMGVISWLVDKSVHVTFYSLDYFQAAAAFTLYTILARFWAELAYT
ARHGNTPGRASGGADQYSRPEWTPIFLWNMTRAVPRAASTVAFTFATVAT
ICMCTGWTSRPTYVDELTGFIEAGAYIIASVVLITTASCAIQELRMVPIE
LPSRRRRVYRITAVTGSVCACLLIRAMVLIWLVNRAVKLTTGWSMVWVVM
YMGFLDALPLAIVLMYNRVAPLSMLSISGDRGRGRVDPRHAPSEEVPLIG
GTGTTAGGDESRGCDDGNPFV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR040226	THH1/TOM1/TOM3