prot_F-serratus_M_contig772.18977.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig772.18977.1
Unique Nameprot_F-serratus_M_contig772.18977.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length108
Homology
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BLAST of mRNA_F-serratus_M_contig772.18977.1 vs. uniprot
Match: A0A836CHF3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF3_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.690e-11
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 0 
Query:    1 MGNVFKA--SYIDVHEAARCGHIEEVRRWIDEGKPVDARDNTQKTPL 45
            MGN      +YI+VHEAAR GHI EVR+W+D GK VD RDNTQKTPL
Sbjct:    1 MGNAVNVLPAYINVHEAARTGHIAEVRKWVDAGKEVDVRDNTQKTPL 47
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BLAST of mRNA_F-serratus_M_contig772.18977.1 vs. uniprot
Match: D8LT40_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT40_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 9.980e-5
Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 0 
Query:   25 RRWIDEGKPVDARDNTQKTPL 45
            RRW+DEGKPVDARDNTQKTPL
Sbjct:   49 RRWVDEGKPVDARDNTQKTPL 69
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BLAST of mRNA_F-serratus_M_contig772.18977.1 vs. uniprot
Match: A0A6H5KIU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIU7_9PHAE)

HSP 1 Score: 50.1 bits (118), Expect = 9.990e-5
Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 0 
Query:   25 RRWIDEGKPVDARDNTQKTPL 45
            RRW+DEGKPVDARDNTQKTPL
Sbjct:   53 RRWVDEGKPVDARDNTQKTPL 73
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig772.18977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CHF3_9STRA1.690e-1168.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LT40_ECTSI9.980e-595.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIU7_9PHAE9.990e-595.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 89..103
score: 36.96
coord: 41..56
score: 39.15
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 40..69
e-value: 0.0015
score: 27.8
coord: 73..102
e-value: 5.5E-6
score: 35.9
coord: 7..36
e-value: 810.0
score: 5.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 73..105
score: 12.529
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 40..72
score: 12.77
NoneNo IPR availablePFAMPF13637Ank_4coord: 43..94
e-value: 3.6E-12
score: 46.6
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 11..107
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 3..108
e-value: 1.2E-33
score: 117.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 12..107
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 7..108
score: 30.529

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig772contigF-serratus_M_contig772:234573..254076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig772.18977.1mRNA_F-serratus_M_contig772.18977.1Fucus serratus malemRNAF-serratus_M_contig772 234470..254076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig772.18977.1 ID=prot_F-serratus_M_contig772.18977.1|Name=mRNA_F-serratus_M_contig772.18977.1|organism=Fucus serratus male|type=polypeptide|length=108bp
MGNVFKASYIDVHEAARCGHIEEVRRWIDEGKPVDARDNTQKTPLHQAAQ
WGQEEALDFLVECGANVNAADYIEDTPLHFACYFGHANCARILIKAGANV
NAQDCYGN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom