prot_F-serratus_M_contig772.18973.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig772.18973.1
Unique Nameprot_F-serratus_M_contig772.18973.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length767
Homology
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BLAST of mRNA_F-serratus_M_contig772.18973.1 vs. uniprot
Match: D8LT37_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT37_ECTSI)

HSP 1 Score: 504 bits (1299), Expect = 8.900e-168
Identity = 319/640 (49.84%), Postives = 396/640 (61.88%), Query Frame = 0 
Query:  109 MPGPDKKALVLQLADWDPIKRVQVLTAWEAADPKMSADDLVNLMRQEQARGGDKLGSLWRCSLCSIKRKLEMEAKLKWDVHRRKGSTVRAGRCPTTGVLYDFRSK-SRGAIDVYRSPHESPFGFAPPRKTGLNDRRRRDPERDVGTGTKTEKPPPREACDSFEVSDATGACAGISISSARSVVSEAANEALVKKTPPRNHRHQSPAGLGGTTSVRGDEPPRSTSPTPTYAGREFDPCRLCKACIIEWRSAIIFRGHDLELWHAVDDERRALLELQGRNDIFKAEWVKREWRDRQVSELLRFIVEANLDSSSRHSLEEREKAARSTQSAELRRMLDLKLSYKAAVENGAAKDEGLKRLSERRASTWASTLRLKASLNLDRHYASLESGGLPASLERKHNTSTKRSDFLADGTPVTPQGAKQAFGRASPDADDESKKIRQWKSEAQAKEEVFERRREVRAWQLLRGRQARFEYLSGRWVKAARDIEENQRQTRMLKVVKCERRVREQQAAKLERMRQLAXXXXXXXXXXXXXXXXRLERDREVEERTKCESRELELMRREEAAQLAGGDRRVCNFSGVLFWGLVHEMQRLRAVEEKQRLAWEARVKSTREKMIAVRCISKLSHFGYALTPKDPQLAQKIEVL 747
            M   DKK L+LQLADW+P+++V+V+ AWEA DP M+A  L+ L+R+EQARG +   SLW+CSLC +KR +E+EA++K   HRRK  T+ AG       LYD+R K S G  D Y S HES F F   R   L                  E P        +E    TG  AG                   + T P          LGG    R  E    T+     +G         K C+   RSAII  GHDLELWH VD ERRALL  Q R D+ KA W +RE +DRQVSELLR I EANLD+ SRHSLE+R  AA++ Q  ++RRMLDLKLS+ AAV +GA KDEGLKRL+ER A+ WA+ L+LKA+LN+DRHYASLE GGLPASL R++ TS++ SDFL DGTP TPQGA Q FGRA P  D+ES  IR WK  A+  EEV + RR+VR WQ   GR+ARF  L  RWV  A DIEE QRQ RM++  + E+R+RE+QAAKL R RQLA                ++ERD+E EER + E  ELE M REEAAQLAGGDR         +WGL+ E+QRLR +EE++R AWE R+++T+EKM+AVRCIS+LS F +A  P DP+L Q+I+ L
Sbjct:    1 MSQQDKKILLLQLADWNPVRKVKVMKAWEATDPAMTAGFLLELIREEQARG-EGPDSLWQCSLCPVKRNVEVEARMKRGEHRRKDRTIDAGS------LYDYRVKGSGGGPDTYSSAHESLFEFKQQRHQHLQQ---------------DESP--------WE----TGGTAG--------------GAGAAEGTKP----------LGGAQKTRYVEDRAGTA-----SGAGDLASSPAKECLD--RSAIISSGHDLELWHTVDHERRALLTGQRRADVLKARWAERERKDRQVSELLRLISEANLDAFSRHSLEDRAMAAQNLQVVDVRRMLDLKLSHSAAVNSGACKDEGLKRLNEREATAWAAKLKLKAALNMDRHYASLEPGGLPASLRRRNPTSSQPSDFLDDGTPATPQGAMQTFGRACPPEDNESGAIRLWKRGAKETEEVLDLRRDVREWQSSCGRRARFSDLCERWVGVASDIEEKQRQKRMIEAAEREKRMRERQAAKLLRKRQLAELRANAGSRATGEERRKVERDKEAEERKRLEGEELERMSREEAAQLAGGDR---------YWGLIRELQRLRVIEEERRRAWEVRIRATKEKMVAVRCISELSDFTHATPPIDPELQQQIDRL 566
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig772.18973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT37_ECTSI8.900e-16849.84C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 632..652
NoneNo IPR availableCOILSCoilCoilcoord: 536..556

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig772contigF-serratus_M_contig772:197393..203980 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig772.18973.1mRNA_F-serratus_M_contig772.18973.1Fucus serratus malemRNAF-serratus_M_contig772 174624..204152 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig772.18973.1 ID=prot_F-serratus_M_contig772.18973.1|Name=mRNA_F-serratus_M_contig772.18973.1|organism=Fucus serratus male|type=polypeptide|length=767bp
MGSVDAKARNTLQEVVRLIAISGKDTRLSVKEILVHACANLDVDRCVSLL
ETMLSLGQDAALQLLWLYERYGMPSASGSMTKCAYDHFGRDLGKMRHLFA
SLIEEIIGMPGPDKKALVLQLADWDPIKRVQVLTAWEAADPKMSADDLVN
LMRQEQARGGDKLGSLWRCSLCSIKRKLEMEAKLKWDVHRRKGSTVRAGR
CPTTGVLYDFRSKSRGAIDVYRSPHESPFGFAPPRKTGLNDRRRRDPERD
VGTGTKTEKPPPREACDSFEVSDATGACAGISISSARSVVSEAANEALVK
KTPPRNHRHQSPAGLGGTTSVRGDEPPRSTSPTPTYAGREFDPCRLCKAC
IIEWRSAIIFRGHDLELWHAVDDERRALLELQGRNDIFKAEWVKREWRDR
QVSELLRFIVEANLDSSSRHSLEEREKAARSTQSAELRRMLDLKLSYKAA
VENGAAKDEGLKRLSERRASTWASTLRLKASLNLDRHYASLESGGLPASL
ERKHNTSTKRSDFLADGTPVTPQGAKQAFGRASPDADDESKKIRQWKSEA
QAKEEVFERRREVRAWQLLRGRQARFEYLSGRWVKAARDIEENQRQTRML
KVVKCERRVREQQAAKLERMRQLAELRKVAGMRAAREERRRLERDREVEE
RTKCESRELELMRREEAAQLAGGDRRVCNFSGVLFWGLVHEMQRLRAVEE
KQRLAWEARVKSTREKMIAVRCISKLSHFGYALTPKDPQLAQKIEVLAAM
LGKKTQGRGSFKSPSL*
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