prot_F-serratus_M_contig762.18889.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig762.18889.1
Unique Nameprot_F-serratus_M_contig762.18889.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length724
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig762.18889.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 3.810e-10
Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 0 
Query:  294 EEFRIMSNVAPELEGCLQHITSDTTSTISGEE--IYGVIANDQGGVTMLVHAYSFDTLDPPLRWVMAYSGSDTTTDPILYCFSDESADEVHPVDATWTCDLSGAESDFTEVTAMDLVVACGCSGITPSP 420
            E FRI S+V P +EGC Q            EE  + G+   +   +  +  A++ D  D  + + +A+  S+     I+YC S+E A  VHPVDATWTCDL G  + F +VT  ++ + CGC+G TP+P
Sbjct:  447 ESFRITSDVLPVVEGCYQQTDWSFDEGDEYEEYTVSGMSGWEHIAILGMSSAFADDDGDVIMPFYLAFV-SEEDDGTIVYCVSNEDAVTVHPVDATWTCDLGGTGT-FEDVTDEEISMDCGCTG-TPAP 572
[Close]
BLAST of mRNA_F-serratus_M_contig762.18889.1 vs. uniprot
Match: D7G0B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B7_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 3.230e-8
Identity = 57/180 (31.67%), Postives = 83/180 (46.11%), Query Frame = 0 
Query:  414 SGITPSPST-PIEEADLLMPSTPSPMITAXXXXXXXXXXXXSSAVTIGCDMEFSVTSDMAPVLEGCFKNAVTETTSTISGQEIYEVFANDQGGVDMLVHASTFDTLDPP---LRWAMIYAGSDTTTDGILYCYSDESADEVHPADATWLCDLSGAESNFIEVTATDLVVACGCSEFTPSP 589
            SG TPSP+  PI+  D++   +  P I               S+ T G    F + S   P ++GCF+ A +   ST    E Y     +     +LV +   +  +       W +I+   D     +LYCYS+E    VHPADATW CDL G    + +VTA ++   CGC+  TP+P
Sbjct:  517 SGGTPSPTLEPIDFPDVVHAPSSPPEIAP-------------SSPTCGDTESFQIISSELPDIQGCFQ-ATSTLFSTPESTEEYWSLTGEAEFESILVGSILDEDTEEEGDSTPWYLIFLSEDDDAT-VLYCYSNEQGILVHPADATWRCDLDGT-GVYSDVTAEEVSFTCGCTG-TPAP 679
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig762.18889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7T2_9PHAE3.810e-1037.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0B7_ECTSI3.230e-831.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..699
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 718..723
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 700..717
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.457
NoneNo IPR availableTMHMMTMhelixcoord: 700..717

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig762contigF-serratus_M_contig762:275755..314963 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig762.18889.1mRNA_F-serratus_M_contig762.18889.1Fucus serratus malemRNAF-serratus_M_contig762 274649..315958 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig762.18889.1 ID=prot_F-serratus_M_contig762.18889.1|Name=mRNA_F-serratus_M_contig762.18889.1|organism=Fucus serratus male|type=polypeptide|length=724bp
MWRASYIFLLETAAAGMLSSQGEQIPTFTRWAPRSKFELPRKVHHGKDAQ
IPSPFLTERVMMEKSLGLSVTPASVLLTTSSHEAGAPSEFYQKWNASEEE
RPRRVLQSTATTDTGTITIANTCEGEFRIMSNAAPELEGCLQYIATGTTS
TFGGEEIYGVIADDQGGVTMFVYAYSFDTLDPPLRWVMAYTGSDTTTDPI
LYCYSDESAGEVHPVGATWICDLSGEESNFTEVAVMDLVVSCGCSDITPS
PSTPVESVDVMVPSTPSPVVITPSTSPLVEPSMPTSIVISTCEEEFRIMS
NVAPELEGCLQHITSDTTSTISGEEIYGVIANDQGGVTMLVHAYSFDTLD
PPLRWVMAYSGSDTTTDPILYCFSDESADEVHPVDATWTCDLSGAESDFT
EVTAMDLVVACGCSGITPSPSTPIEEADLLMPSTPSPMITASAPSPLVGS
PLPSSAVTIGCDMEFSVTSDMAPVLEGCFKNAVTETTSTISGQEIYEVFA
NDQGGVDMLVHASTFDTLDPPLRWAMIYAGSDTTTDGILYCYSDESADEV
HPADATWLCDLSGAESNFIEVTATDLVVACGCSEFTPSPSSAKPVDSLVH
STPSPEITVPPSNPSGAVIPSSSPSPSLYTEPVTQMYISSSPSSATYGSP
IATSPPPSLARSPSSDFGMTPMPSTDSGSWSGEEQNEVDKSLPLPTVSKF
VIIGAVFAGSGMVIPVAHRKYRR*
back to top