prot_F-serratus_M_contig756.18818.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig756.18818.1
Unique Nameprot_F-serratus_M_contig756.18818.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length603
Homology
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BLAST of mRNA_F-serratus_M_contig756.18818.1 vs. uniprot
Match: D7FRU4_ECTSI (BZIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU4_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 6.470e-31
Identity = 118/303 (38.94%), Postives = 159/303 (52.48%), Query Frame = 0 
Query:  250 VAATSGTGAPILPFNFVPPFGPIVGSNAMTS---VAFAPVPNIVDL-ACAANSWKRVRNADIDTGSKETGKAQYGGHSRLLSSSSIQAKGQETGPNNRVNKRAKKEERLMKNREAANRSRIKRKKILSELENRAATLSSSLVASREENDSLKQEIVSLREHNAFLRGMISAKGIAHELPPLLP--IPTVNIRQSSGSXXXXXXXXXXXXNAVVGVIGTALALVSCVAVSSMD--------------YEGG-------GDSVTDPTLGITASSREKSGSGRRMIMSVDDYDLTSAHGHAAKEFN 525
            +A +SG G PILP  F P F     S+       ++  P  N     A A  + KR+R  D   G+                           G   R+ KRA++EERLMKNREAANRSR+KRK++LSELENRA TLS SL ASR+E  SLKQEI SLRE N+FLRGM+SA G A +LPP++P    + ++R        XXXXXXXXX  ++G +GT LA++SCVA+S+                Y GG       G  V +      +    +S  GRR ++SVD+ D   ++    + ++
Sbjct:  211 LAVSSGAGTPILPLAFTPRFSGTSNSSXXXXXXXLSAFPALNFSGFQAAAGQALKRLRGGDAPAGAASGQPCAXXXXXXXXXXXXXXXXXXXXG---RITKRARREERLMKNREAANRSRVKRKEVLSELENRADTLSKSLAASRDETASLKQEIASLREQNSFLRGMLSAHGSAIDLPPIMPSGASSDSLRSHRNGGGRXXXXXXXXXXXIIGAVGTGLAVISCVALSAXXXXXXXXXXXEPRAGYNGGFXXXXGDGRGVGESAYASRSGFGSRSMGGRRTLLSVDESDSFDSYPSGVETYS 510
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig756.18818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRU4_ECTSI6.470e-3138.94BZIP domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 372..406
NoneNo IPR availableGENE3D1.20.5.170coord: 340..417
e-value: 2.5E-9
score: 39.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..538
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 558..602
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 539..557
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 349..405
NoneNo IPR availableTMHMMTMhelixcoord: 536..558
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 345..409
e-value: 1.3E-4
score: 31.4
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 346..407
e-value: 1.4E-8
score: 34.7
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 353..367
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 347..410
score: 10.059

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig756contigF-serratus_M_contig756:263913..274559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig756.18818.1mRNA_F-serratus_M_contig756.18818.1Fucus serratus malemRNAF-serratus_M_contig756 263863..274870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig756.18818.1 ID=prot_F-serratus_M_contig756.18818.1|Name=mRNA_F-serratus_M_contig756.18818.1|organism=Fucus serratus male|type=polypeptide|length=603bp
MELPLTMMVSPQLQETYSAVMEDHPRSPSVLSLEDWDMEEFDPDTWGVLV
ESLSEEDLSDIFKDCDALPCPAYKHEGHQLREEEQQQYGHGNIKESREED
ERVKQQELLQRQIPLVSPAVLPTECSLERELLEPLPDLDDCNSVEGSLSA
STTSTCAAKSGEARGMVAASTTSCTTWSSASEDSDDNSVSSCPAPNDITS
GINIDRRARKEVAGTHRALDCGQPSLSTSTSSQGASQDACCHASSNLKPV
AATSGTGAPILPFNFVPPFGPIVGSNAMTSVAFAPVPNIVDLACAANSWK
RVRNADIDTGSKETGKAQYGGHSRLLSSSSIQAKGQETGPNNRVNKRAKK
EERLMKNREAANRSRIKRKKILSELENRAATLSSSLVASREENDSLKQEI
VSLREHNAFLRGMISAKGIAHELPPLLPIPTVNIRQSSGSNGGGGGRATT
AVNAVVGVIGTALALVSCVAVSSMDYEGGGDSVTDPTLGITASSREKSGS
GRRMIMSVDDYDLTSAHGHAAKEFNAGVRYVLGSEIVQFWGTVLALVALI
LLLFFIAQEIYNLVRRDANGRGWRMSVMSRAFPRKSRRSGSWLTGFGVCK
AQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP