prot_F-serratus_M_contig756.18815.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig756.18815.1
Unique Nameprot_F-serratus_M_contig756.18815.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length111
Homology
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BLAST of mRNA_F-serratus_M_contig756.18815.1 vs. uniprot
Match: D7FRB9_ECTSI (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRB9_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 9.770e-23
Identity = 48/85 (56.47%), Postives = 60/85 (70.59%), Query Frame = 0 
Query:    6 TVYFFKSDDLDRATNPFNISISEDEETGYVYSFTGVNTAGTPLGTGENFSFPATSRGRYVRFTPILDDDQWCSISEVEIYMSSET 90
            T+YF+KS++ DR TNPF +S S D  T +  SF  +NT  TPLG GE+F+FP  S GRYVRFT  L DDQW S++EVEIY+   T
Sbjct:   43 TIYFYKSNEEDRVTNPFVVSTSTDGTT-FTTSFEDINTIPTPLGEGEDFAFPTGSSGRYVRFTGDLADDQWLSVNEVEIYVDVAT 126
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BLAST of mRNA_F-serratus_M_contig756.18815.1 vs. uniprot
Match: A0A6H5JTK7_9PHAE (F5/8 type C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK7_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.860e-21
Identity = 51/89 (57.30%), Postives = 60/89 (67.42%), Query Frame = 0 
Query:    2 LDGFTVYFFKSDDLDRATNPFNISISEDEETGYVYSFTGVNTAGTPLGTGENFSFPATSRGRYVRFTPILDDDQWCSISEVEIYMSSET 90
            L   T+YF+K DD+DRATNPF +S S D  T Y  SF  VNT  T +G GE+F+FP  S GRYVRFT  L DDQW SI+E EIY+   T
Sbjct:   98 LTKLTIYFYKCDDVDRATNPFIVSTSTDGTT-YTTSFEDVNTIPTAIGAGEDFAFPTGSSGRYVRFTGELADDQWLSINEAEIYVDVAT 185
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig756.18815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRB9_ECTSI9.770e-2356.47F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JTK7_9PHAE1.860e-2157.30F5/8 type C domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 1..91
e-value: 7.4E-9
score: 37.7
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 2..85
IPR000421Coagulation factor 5/8 C-terminal domainPROSITEPS50022FA58C_3coord: 1..87
score: 8.775

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig756contigF-serratus_M_contig756:102992..120567 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig756.18815.1mRNA_F-serratus_M_contig756.18815.1Fucus serratus malemRNAF-serratus_M_contig756 102992..120576 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig756.18815.1 ID=prot_F-serratus_M_contig756.18815.1|Name=mRNA_F-serratus_M_contig756.18815.1|organism=Fucus serratus male|type=polypeptide|length=111bp
MLDGFTVYFFKSDDLDRATNPFNISISEDEETGYVYSFTGVNTAGTPLGT
GENFSFPATSRGRYVRFTPILDDDQWCSISEVEIYMSSETLGSSSAPTVA
PTPLVTTVGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf
IPR000421FA58C