prot_F-serratus_M_contig754.18805.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig754.18805.1
Unique Nameprot_F-serratus_M_contig754.18805.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length235
Homology
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BLAST of mRNA_F-serratus_M_contig754.18805.1 vs. uniprot
Match: D7FRL9_ECTSI (Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL9_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 1.100e-76
Identity = 113/149 (75.84%), Postives = 128/149 (85.91%), Query Frame = 0 
Query:   79 PPRSVLSRAWDIEVDLHGERNIITVHPGDSILEAAEMAGMNLSYECRRGSCTSCAAKIQDGSSGYFENKAERKAEDGAPEGFVLTCCTHPTGPGVKLELSANADMWAAYCKRFDDIGTRDLLRHASAGLMRKYRMEHPQEFRREVERQF 227
            PPRSVL R WD+EVD HGER +ITV PGDSILEAAEM+GMNLSYECRRG+C SCAA++Q+GSS +FEN A+R  EDGAP+GFVLTC THPTGPGVKL+LSANA+MW AYC R DDI T+DLLR  SA +MRKYR+EHP  FR EVERQF
Sbjct:  184 PPRSVLERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAARVQNGSSSHFENSADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAEMWDAYCARLDDISTQDLLRQTSAEVMRKYRVEHPDYFREEVERQF 332
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BLAST of mRNA_F-serratus_M_contig754.18805.1 vs. uniprot
Match: A0A836CQ20_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ20_9STRA)

HSP 1 Score: 111 bits (277), Expect = 5.640e-27
Identity = 55/159 (34.59%), Postives = 86/159 (54.09%), Query Frame = 0 
Query:   86 RAWDIEVDLHGERNIITVHPGDSILEAAEMAGMNLSYECRRGSCTSCAAKIQDGSSGYFENKAERKA-------------EDGAPEGFVLTCCTHPTGPGVKLELSANADMWAA-YCKRFDDIGTRDLLRHASAGLMRKYRMEHPQEFRREVERQFGTE 230
            + W++  +LHGE   + + P D+IL+AAE+AG+   Y+CRRG+C +CA + +  SS        ++A             ++   EGF L+CC++P GPG+++EL    + W   YC R  D  TR     A A + R Y   +P +F  ++ERQF  E
Sbjct:    9 KTWEVTFELHGEETTVLMRPDDTILQAAELAGLRAPYDCRRGNCLTCAGRFKAASSYNLVTTLRQEAGGAVTLDSDTFLCDEAKDEGFFLSCCSYPVGPGLRVELGVQKEAWQIQYCDRLRDEATRAAALEAVAQVQRGYSERNPDKFVADLERQFEGE 167
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BLAST of mRNA_F-serratus_M_contig754.18805.1 vs. uniprot
Match: A0A0G4EXA3_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EXA3_VITBC)

HSP 1 Score: 79.3 bits (194), Expect = 3.130e-15
Identity = 46/120 (38.33%), Postives = 68/120 (56.67%), Query Frame = 0 
Query:   75 KGRSPPRSVLSRAWDIEVDLHGERNIITVHPGDSILEAAEMAGMNLSYECRRGSCTSCAAKIQDGSSG--YFENKAERKAEDGAPEGFVLTCCTHPTGPGVKLELSANADMWAAYCKRFD 192
            +GR  P    SR+W IE++  G+   + V  G S+LEAAE    +   +CR G CTSCA +I  G  G  Y  N+ +   E    +G+VLTC T+  GPG+K+EL+ N +++     RF+
Sbjct:   11 EGRLDP----SRSWTIELNYDGDIETVEVPEGTSVLEAAETVWEDPPCDCRNGVCTSCAGRIVGGKLGEAYVINR-DSLEEVTKDKGYVLTCQTYVCGPGLKVELNKNEEVYGMQYGRFE 125
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BLAST of mRNA_F-serratus_M_contig754.18805.1 vs. uniprot
Match: A0A6V1VDI3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VDI3_HETAK)

HSP 1 Score: 79.3 bits (194), Expect = 8.180e-15
Identity = 37/95 (38.95%), Postives = 56/95 (58.95%), Query Frame = 0 
Query:   85 SRAWDIEVDLHGERNIITVHPGDSILEAAEMAGMNLSYECRRGSCTSCAAKIQDGSSGY-FENKAERKAEDGAPEGFVLTCCTHPTGPGVKLELS 178
            S+ W+IE+ L G   ++TV   D +LEAAE    +  + CR G CT+C+ +I +G  G  ++       E    +GF ++C TH TGPGVK+EL+
Sbjct:   47 SKTWEIELTLDGVTKMVTVSEADCVLEAAEKVFDDPPFSCRNGVCTTCSCRIVEGKEGENYKLAVHGLGETALSQGFTMSCQTHVTGPGVKIELN 141
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BLAST of mRNA_F-serratus_M_contig754.18805.1 vs. uniprot
Match: A0A0G4EFE2_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFE2_VITBC)

HSP 1 Score: 72.4 bits (176), Expect = 3.170e-12
Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 0 
Query:   69 DDFDVAKGRSPPRSVLSRAWDIEVDLHGERNIITVHPGDSILEAAEMAGMNLSYECRRGSCTSCAAKIQDGSSGYFENKAERKAEDGAPEGFVLTCCTHPTGPGVKLEL 177
            D   VA  R  P + L  +  ++V ++G+   +TV+PGDSILEAAE AG+ L ++CR G+C  C AK+  GS  +     + +  +    G+ L C   P    V +E+
Sbjct:   47 DALSVAARRHRPSTQLMSSRIVKVSINGDTYDVTVNPGDSILEAAEEAGLELPHDCRLGTCLQCTAKVVSGSVDHGMGTLDDEVTEA---GYTLACQATPLSDDVHIEI 152
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BLAST of mRNA_F-serratus_M_contig754.18805.1 vs. uniprot
Match: A0A0M0K3H8_9EUKA (Ferredoxin (2fe-2s) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K3H8_9EUKA)

HSP 1 Score: 75.1 bits (183), Expect = 5.930e-12
Identity = 45/115 (39.13%), Postives = 63/115 (54.78%), Query Frame = 0 
Query:   80 PRSVLSRAWDIE-VDLHGERNIITVHPGDSILEAAEMAGMNLSYECRRGSCTSCAAKIQDGSSGYFENKAERKAEDGAP-EGFVLTCCTHPTGPGVKLELSANAD-MWAAYCKRF 191
            P S  SR WD+  V    +R+ ++V    S+L AAE+AG+    +CRRG C SCAA++  GS       ++    D A  EG VL C  +P GP ++L+L A  D +   Y KRF
Sbjct:  417 PSSNPSRVWDVTLVSADEQRHTLSVAENQSVLRAAELAGLLPCSDCRRGRCLSCAARVVSGSKFSLAVDSDTALCDEAHVEGIVLLCSAYPRGPNLELKLDAEGDALEIQYEKRF 531
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BLAST of mRNA_F-serratus_M_contig754.18805.1 vs. uniprot
Match: A0A7S2E031_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E031_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.060e-11
Identity = 52/160 (32.50%), Postives = 82/160 (51.25%), Query Frame = 0 
Query:   86 RAWDIEVDLHGERNIITVHPGDS--ILEAAEMAG-MNLSYECRRGSCTSCAAKIQDGSS-------GYFENKAERK------AEDGAPEGFVLTCCTHPTGPGVKLELSANADMWAA-YCKRFDDIGTRDLLRHASAGLMRKYRMEHPQEFRREVERQFG 228
            R W +++ L     ++ V   ++  +L A E  G ++  +ECRRG+C +CAAK+  GSS       G F +  E K       E+   +GF+LTCC++ TGPG+K+ +  + + +   Y +RF     R     ASA L   +  E+  E+   VE QFG
Sbjct:   21 RLWTVDLQLPETEELVPVIAVENTPLLLAMESHGELSPPFECRRGNCLNCAAKLLPGSSQNFDMYLGEFHDMGEDKDRHTFLCEEAKEKGFILTCCSYATGPGLKIAVDKSYEAYQVQYHERFKK-KHRAAATAASAVLQTVWAEENTAEWLEMVENQFG 179
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BLAST of mRNA_F-serratus_M_contig754.18805.1 vs. uniprot
Match: A0A4D9D796_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D796_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 9.240e-11
Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 0 
Query:   85 SRAWDIEVDLHGERNIITVHPGDSILEAAEMAGMNLSYECRRGSCTSCAAKIQDGSSGYFENKAERKAEDGAPEGFVLTCCTHPTGPGVKLEL 177
            ++ WD+++   GE  ++TV     ILEAAE    ++   CR G CT+CA ++        E      AE  +  GFVLTC THP GPG+++EL
Sbjct:   52 TKTWDVKMTYKGETKVLTVSEDTCILEAAEKE-WDVPCSCRNGICTTCAGRVIANPDSKKEAIHGLSAEQ-SKNGFVLTCQTHPCGPGLEVEL 142
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BLAST of mRNA_F-serratus_M_contig754.18805.1 vs. uniprot
Match: A0A3M1CK22_9DELT (Ferredoxin n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1CK22_9DELT)

HSP 1 Score: 64.7 bits (156), Expect = 4.180e-10
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 0 
Query:   88 WDIEVDLHGERNIITVHPGDSILEAAEMAGMNLSYECRRGSCTSCAAKIQDGSSGYFENKAERKAEDGAPEGFVLTCCTHPTGP 171
            +D E+D   E    T  PG+++L+AAE AG+ L Y CR G C SCAA+I +GS+   E       E+    GF+L CCT  T P
Sbjct:    2 FDAELDRWLE---FTCEPGETVLDAAERAGLALPYSCRSGGCLSCAARIIEGSAEMDEQYVLE--EEHIARGFMLLCCTTVTSP 80
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BLAST of mRNA_F-serratus_M_contig754.18805.1 vs. uniprot
Match: A0A7W2GXK4_9HYPH (Phenylacetate-CoA oxygenase/reductase subunit PaaK n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A7W2GXK4_9HYPH)

HSP 1 Score: 68.9 bits (167), Expect = 5.560e-10
Identity = 52/155 (33.55%), Postives = 75/155 (48.39%), Query Frame = 0 
Query:   23 FALGPSQAMQSSRSTKFGHKWCKSKGVGSESFGHVENDTHADGVHDDDFDVAKGRSPPRSVLSRAWDIEVDLHGERNIITVHPGDSILEAAEMAGMNLSYECRRGSCTSCAAKIQDGSSGYFENKAERKAEDGAPEGFVLTCCTHPTGPGVKLEL 177
            F  GP+  +    +T       K+ G+G E   HVE    A G         K  +PP  + S   D      G+R  + V  G+SIL+AA  AGM+L + C+ G C++C AK+ +G++    N +    E  A  GFVLTC  HPT P V ++ 
Sbjct:  231 FVCGPTGMIDDLEAT------LKALGLGEEKI-HVERFVSALGGKPRPKPEVKPDAPPAHLASLIVD------GKRREVPVAEGESILDAALRAGMDLPFACKGGMCSTCRAKVVEGATEMEMNYSLEPWEVKA--GFVLTCQAHPTTPRVVVDF 370
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig754.18805.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRL9_ECTSI1.100e-7675.84Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A836CQ20_9STRA5.640e-2734.592Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A0G4EXA3_VITBC3.130e-1538.332Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A6V1VDI3_HETAK8.180e-1538.95Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4EFE2_VITBC3.170e-1234.862Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A0M0K3H8_9EUKA5.930e-1239.13Ferredoxin (2fe-2s) n=1 Tax=Chrysochromulina tobin... [more]
A0A7S2E031_9STRA1.060e-1132.50Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9D796_9STRA9.240e-1138.712Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A3M1CK22_9DELT4.180e-1042.86Ferredoxin n=1 Tax=Deltaproteobacteria bacterium T... [more]
A0A7W2GXK4_9HYPH5.560e-1033.55Phenylacetate-CoA oxygenase/reductase subunit PaaK... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 234..234
NoneNo IPR availablePANTHERPTHR47354FAMILY NOT NAMEDcoord: 60..176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..234
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 94..169
e-value: 3.0E-12
score: 46.3
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 88..181
score: 11.217
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 73..183
e-value: 3.0E-20
score: 74.0
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 124..132
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 91..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig754contigF-serratus_M_contig754:90682..95978 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig754.18805.1mRNA_F-serratus_M_contig754.18805.1Fucus serratus malemRNAF-serratus_M_contig754 90322..96618 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig754.18805.1 ID=prot_F-serratus_M_contig754.18805.1|Name=mRNA_F-serratus_M_contig754.18805.1|organism=Fucus serratus male|type=polypeptide|length=235bp
MSPIVKCVTAAVLLCPYPYVFGFALGPSQAMQSSRSTKFGHKWCKSKGVG
SESFGHVENDTHADGVHDDDFDVAKGRSPPRSVLSRAWDIEVDLHGERNI
ITVHPGDSILEAAEMAGMNLSYECRRGSCTSCAAKIQDGSSGYFENKAER
KAEDGAPEGFVLTCCTHPTGPGVKLELSANADMWAAYCKRFDDIGTRDLL
RHASAGLMRKYRMEHPQEFRREVERQFGTEAPDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
IPR0060582Fe2S_fd_BS
IPR0360102Fe-2S_ferredoxin-like_sf