prot_F-serratus_M_contig752.18789.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig752.18789.1
Unique Nameprot_F-serratus_M_contig752.18789.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length795
Homology
BLAST of mRNA_F-serratus_M_contig752.18789.1 vs. uniprot
Match: A0A6H5KSR4_9PHAE (GRIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSR4_9PHAE)

HSP 1 Score: 431 bits (1108), Expect = 1.520e-128
Identity = 391/810 (48.27%), Postives = 454/810 (56.05%), Query Frame = 0
Query:    5 TRNMAEAEDRARDFSEEATRLRGQLENRSTRLEELQEAFRSEAQSAARIPTLEGDLEAERVGRRELEGEVRALREDVRATEKIKEAFARENEEIMSAMQGQVDSANKERDAAQAGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKVVGLEEKGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVAENEEAAEGGKTAKEDLETKVKRLKILLSKLQKSNQSKDADIAALKTP-PPPTVFTVDLRVRYRGSVWCLLTTNPSGAEGTRLTATAGPEEGGAADRDGLTAEGLLKHK----QWVNEDKLRAWMAGGTSRSDDSLWPTVVQDDLEKKAAAAKEEARAAEARAASKQAELETLSSDFAKYKARAHTALKKATSSGADDKRKIEVIAELESDRDRL---IEELGQTRAEFEKQIAEATSAAKLTQDDLQTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELKSQLKVARAQATESSCITQRLQDELERVAKEREASDGR---RGSWDPRSDGGWAGQQMLD--------SRRGMGTEPSRGF---PNQLRLSEDAIPPRTPDSVAAISATASDVGVDDLIGEASNSFPAVAAQPVHLMAFAELERRNISVESKKQAEVSEMRTELAEALLRVEQLSDQEAVLKATIRALEVELKTERDLGSSESGSVNVAYLKSAVVRYMSTRDTGEQRSLLRVISTILQLTRLEVEAVEARIAELERTMMGRAGNMVGGAGXXXXXVVGGVVGFVWRGGGKAEPGMEAGAAEEGENGRDEG 792
            T  + EAED  R  SEE+  LR  LE R  RLEE          SAAR P LE DL AER GRREL                            M A+QGQVD+AN           XXXXXXX                 XXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXX         V E E+ A   K+AKEDLE KVKRLK LLSKLQKS+ SKDAD+AALK P PPP  FTV LRVR+ GS WC +       + T+  AT+  E+GG   +D   AE     K    QWV EDK R W+AGG+S SD +LWP VVQ+  E++A AA  EAR A   A + + ELE LS++FAKYKARAHTALKKATS+GA+DKRK E+IA L+S+  RL   +E                                                                            DELKSQLK A+AQA ESSCI QRLQ+ELE V K R   D R    GSWD R+DGGWAGQQ+L         +R     EP+         + LSE  +PP     +  + + ++                  A QPV LMA AELERR+ S+E   QAEV+EMR ELAEALLRVEQLS QE++LK+TIRALE +L TER+LGS E+  +NVAYLKSAVVRYMSTRD GEQRSLLRVISTILQ T+ EV  VEARI ELE+TM+ RAG+MVGGAGXXXXXVVGGVVG VW GGG+A    +    +  E+G +EG
Sbjct:  961 TCRLREAEDLLRSTSEESMVLRRGLEERCQRLEE----------SAARAPALEADLAAERSGRRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGALQGQVDAANXXXXXXXXXXXXXXXXXXSSKTRLKDLFAKYKAVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREDEFAKMVGEKEQVAAAEKSAKEDLEVKVKRLKSLLSKLQKSSHSKDADLAALKAPAPPPKAFTVALRVRHEGSTWCFV-------KATQQPATS--EDGG---KDTAPAEASAAPKPDKQQWVTEDKARTWLAGGSSSSDVALWPKVVQEAFEERAVAAAAEARVAAEGALATRQELEALSTEFAKYKARAHTALKKATSNGAEDKRKDELIAALQSEVARLTKRVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAELETAQEQVRGLQGSLRDQERKLAQLQEAEEGHSEEMSALREARDELKSQLKAAKAQANESSCIAQRLQEELEEVTKSRGNDDRRGNGNGSWDARADGGWAGQQLLXXXXXXXXXARLQATDEPAAALGVSKGGVPLSEGGVPPLPAAGLGGMPSASASPXXXXXXXXXXXFAEGGAGQPVQLMAVAELERRHTSLEGHVQAEVTEMRNELAEALLRVEQLSAQESLLKSTIRALETDLVTERNLGSGETAPINVAYLKSAVVRYMSTRDAGEQRSLLRVISTILQFTKQEVADVEARITELEKTMVRRAGSMVGGAGXXXXXVVGGVVGLVW-GGGRAAAADDGDGVDVTEDGGEEG 1747          
BLAST of mRNA_F-serratus_M_contig752.18789.1 vs. uniprot
Match: D8LGD5_ECTSI (GRIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD5_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 1.440e-52
Identity = 118/158 (74.68%), Postives = 132/158 (83.54%), Query Frame = 0
Query:  618 MAFAELERRNISVESKKQAEVSEMRTELAEALLRVEQLSDQEAVLKATIRALEVELKTERDLGSSESGSVNVAYLKSAVVRYMSTRDTGEQRSLLRVISTILQLTRLEVEAVEARIAELERTMMGRAGNMVGGAGXXXXXVVGGVVGFVWRGGGKAEP 775
            MA AELERR+ SVE   QAEV+EMR ELAEALLRVEQLS QE++LK+TIRALE +L TER+LGS E+  +NVAYLKSAVVRYMSTRD GEQRSLLRVISTILQ T+ EV  VEARI ELE+TM+ RAG+MVGG  XXXXXVV  VVG VW GGG+A P
Sbjct:    1 MAVAELERRHTSVEGHVQAEVTEMRNELAEALLRVEQLSAQESLLKSTIRALETDLVTERNLGSGETAPINVAYLKSAVVRYMSTRDAGEQRSLLRVISTILQFTKQEVADVEARITELEKTMVRRAGSMVGGXXXXXXXVVXXVVGLVW-GGGRAAP 157          
BLAST of mRNA_F-serratus_M_contig752.18789.1 vs. uniprot
Match: D7FMD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD5_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 2.320e-12
Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = 0
Query:  225 VKRLKILLSKLQKSNQSKDADIAALKTP-PPPTVFTVDLRVRYRGSVWCLL 274
            VKRLK LLSKLQKS+ SKDAD+AALK P PPP  FTV LRVR+ GS WC +
Sbjct:    2 VKRLKSLLSKLQKSSHSKDADLAALKAPAPPPKAFTVALRVRHEGSTWCFV 52          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig752.18789.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KSR4_9PHAE1.520e-12848.27GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LGD5_ECTSI1.440e-5274.68GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FMD5_ECTSI2.320e-1272.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 404..505
NoneNo IPR availableCOILSCoilCoilcoord: 218..238
NoneNo IPR availableCOILSCoilCoilcoord: 638..672
NoneNo IPR availableCOILSCoilCoilcoord: 719..739
NoneNo IPR availableCOILSCoilCoilcoord: 1..42
NoneNo IPR availableCOILSCoilCoilcoord: 341..375
NoneNo IPR availableCOILSCoilCoilcoord: 165..210
NoneNo IPR availableCOILSCoilCoilcoord: 60..87
NoneNo IPR availableCOILSCoilCoilcoord: 127..161
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 43..674
NoneNo IPR availablePANTHERPTHR34491:SF9coord: 43..674
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 343..528
IPR000237GRIP domainSMARTSM007551gripcoord: 685..732
e-value: 2.7E-5
score: 33.6
IPR000237GRIP domainPFAMPF01465GRIPcoord: 687..728
e-value: 1.6E-10
score: 40.7
IPR000237GRIP domainPROSITEPS50913GRIPcoord: 682..732
score: 12.993

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig752contigF-serratus_M_contig752:287465..301364 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig752.18789.1mRNA_F-serratus_M_contig752.18789.1Fucus serratus malemRNAF-serratus_M_contig752 277854..302139 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig752.18789.1 ID=prot_F-serratus_M_contig752.18789.1|Name=mRNA_F-serratus_M_contig752.18789.1|organism=Fucus serratus male|type=polypeptide|length=795bp
MASTTRNMAEAEDRARDFSEEATRLRGQLENRSTRLEELQEAFRSEAQSA
ARIPTLEGDLEAERVGRRELEGEVRALREDVRATEKIKEAFARENEEIMS
AMQGQVDSANKERDAAQAGLKPARQAKEAIEAKLKEAVAEAESLHAKLEA
FEEDNRKLRTEAAKVVGLEEKGAQLSAKVQESEAKLAEALATLQQREDDL
ARTVAENEEAAEGGKTAKEDLETKVKRLKILLSKLQKSNQSKDADIAALK
TPPPPTVFTVDLRVRYRGSVWCLLTTNPSGAEGTRLTATAGPEEGGAADR
DGLTAEGLLKHKQWVNEDKLRAWMAGGTSRSDDSLWPTVVQDDLEKKAAA
AKEEARAAEARAASKQAELETLSSDFAKYKARAHTALKKATSSGADDKRK
IEVIAELESDRDRLIEELGQTRAEFEKQIAEATSAAKLTQDDLQTMSEQL
EAAQEQVHDLEGSLRDYERKVSQLQEVEDGHSEELSTLRETIDELKSQLK
VARAQATESSCITQRLQDELERVAKEREASDGRRGSWDPRSDGGWAGQQM
LDSRRGMGTEPSRGFPNQLRLSEDAIPPRTPDSVAAISATASDVGVDDLI
GEASNSFPAVAAQPVHLMAFAELERRNISVESKKQAEVSEMRTELAEALL
RVEQLSDQEAVLKATIRALEVELKTERDLGSSESGSVNVAYLKSAVVRYM
STRDTGEQRSLLRVISTILQLTRLEVEAVEARIAELERTMMGRAGNMVGG
AGRRVGGVVGGVVGFVWRGGGKAEPGMEAGAAEEGENGRDEGEG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000237GRIP_dom