prot_F-serratus_M_contig75.18778.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig75.18778.1
Unique Nameprot_F-serratus_M_contig75.18778.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length140
Homology
BLAST of mRNA_F-serratus_M_contig75.18778.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 8.860e-50
Identity = 87/138 (63.04%), Postives = 108/138 (78.26%), Query Frame = 0
Query:    1 VVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINGDCTRMEKFFGVKIAHAVDLTKLALIRKVPLGLKRGLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQK 138
            ++  DIEW+I+ +GA  NPPAT QLAAGK V++  +LHGQ++ P ELP  LV LLED  LT TGVGI GDCTR+  F+GV++AHAVDL  LA+ RKV LGL+RGLADLC HLLG+ L KD  VRLS+WN+ DLS++QK
Sbjct:  253 LLALDIEWEISAAGAPANPPATIQLAAGKRVVIFHVLHGQRSVPAELPDPLVDLLEDTKLTKTGVGIKGDCTRLTSFYGVEVAHAVDLRSLAVERKVELGLRRGLADLCVHLLGQQLPKDPTVRLSKWNKLDLSDDQK 390          
BLAST of mRNA_F-serratus_M_contig75.18778.1 vs. uniprot
Match: A0A6P5EXU7_ANACO (Werner Syndrome-like exonuclease n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5EXU7_ANACO)

HSP 1 Score: 84.7 bits (208), Expect = 1.340e-17
Identity = 56/139 (40.29%), Postives = 73/139 (52.52%), Query Frame = 0
Query:    1 VVGFDIEWDIALS-GAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINGDCTRMEKFFGVKIAHAVDLTKLALIRKVPLGLKR-GLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQ 137
            VVG D EW    S GA  NP A  QL  G+  LV  +LH    P      +L   L D    F GVG+ GD  R+    G+ +A AVDL  LA  R     LK+ GLA L + ++   + K  RVR+SRW+R+DL+ +Q
Sbjct:   53 VVGLDAEWRPNFSAGAAPNPVALVQLCVGRRCLVFSLLHADYVPL-----ALANFLADTRFAFVGVGVAGDAERLADECGLPVADAVDLRDLAAERTGRRQLKQMGLAGLAAEIMEVEVRKPSRVRMSRWDRRDLTLDQ 186          
BLAST of mRNA_F-serratus_M_contig75.18778.1 vs. uniprot
Match: A0A199VKE8_ANACO (Werner Syndrome-like exonuclease n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199VKE8_ANACO)

HSP 1 Score: 84.7 bits (208), Expect = 1.450e-16
Identity = 56/139 (40.29%), Postives = 73/139 (52.52%), Query Frame = 0
Query:    1 VVGFDIEWDIALS-GAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINGDCTRMEKFFGVKIAHAVDLTKLALIRKVPLGLKR-GLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQ 137
            VVG D EW    S GA  NP A  QL  G+  LV  +LH    P      +L   L D    F GVG+ GD  R+    G+ +A AVDL  LA  R     LK+ GLA L + ++   + K  RVR+SRW+R+DL+ +Q
Sbjct:  252 VVGLDAEWRPNFSAGAAPNPVALVQLCVGRRCLVFSLLHADYVPL-----ALANFLADTRFAFVGVGVAGDAERLADECGLPVADAVDLRDLAAERTGRRQLKQMGLAGLAAEIMEVEVRKPSRVRMSRWDRRDLTLDQ 385          
BLAST of mRNA_F-serratus_M_contig75.18778.1 vs. uniprot
Match: B9FDW5_ORYSJ (3'-5' exonuclease domain-containing protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=B9FDW5_ORYSJ)

HSP 1 Score: 74.7 bits (182), Expect = 3.870e-14
Identity = 50/138 (36.23%), Postives = 70/138 (50.72%), Query Frame = 0
Query:    1 VVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINGDCTRMEKFFGVKIAHAVDLTKLALIRKVPLGLKR-GLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQ 137
            VVG D+EW  A       P A  QL   +  LV QILH        +P +L   L D   TF GVG+  D  R+   +G+++  AVDL  LA        L+R GL  L   ++G  + K   VR+S W++++LSE+Q
Sbjct:   10 VVGLDVEWRPA--APVPGPVAVLQLCVDRRCLVFQILHADY-----VPDALSRFLADPRFTFVGVGVRDDAARLRVGYGLEVPRAVDLRALAADTLGRPDLRRAGLRALVREVMGVQMDKPHHVRVSAWDKRNLSEDQ 140          
BLAST of mRNA_F-serratus_M_contig75.18778.1 vs. uniprot
Match: A0A0E0IQK6_ORYNI (3'-5' exonuclease domain-containing protein n=8 Tax=Oryza TaxID=4527 RepID=A0A0E0IQK6_ORYNI)

HSP 1 Score: 75.5 bits (184), Expect = 4.730e-14
Identity = 51/138 (36.96%), Postives = 70/138 (50.72%), Query Frame = 0
Query:    1 VVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINGDCTRMEKFFGVKIAHAVDLTKLALIRKVPLGLKR-GLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQ 137
            VVG D+EW  A       P A  QL   +  LV QILH        LP +L   L D   TF GVG+  D  R+   +G+++  AVDL  LA        L+R GL  L   ++G  + K   VR+S W++++LSE+Q
Sbjct:   55 VVGLDVEWRPA--APVPGPVAVLQLCVDRRCLVFQILHADY-----LPDALSRFLADPRYTFVGVGVRDDAARLRVGYGLEVPRAVDLRALAADTLGRPDLRRAGLRALVREVMGVQMDKPHHVRVSAWDKRNLSEDQ 185          
BLAST of mRNA_F-serratus_M_contig75.18778.1 vs. uniprot
Match: UPI001CC3C793 (Werner Syndrome-like exonuclease n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3C793)

HSP 1 Score: 76.6 bits (187), Expect = 4.790e-14
Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = 0
Query:    1 VVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINGDCTRMEKFFGVKIAHAVDLTKLALIRKVPLGLKR-GLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQ 137
            VVG DIEW  + S + E+  A  QL      L+ Q+L+       ++P SL+  L++ SLTF GVGI GD  ++ +   + + + VDL  LA  R     L+  GL +L   +LG+ + K  +V +SRW+ + L+ +Q
Sbjct:  125 VVGLDIEWRPSFSRSVEHNVAVLQLCVEGNCLIFQLLYAD-----QIPTSLINFLKNPSLTFVGVGIQGDVEKLLEDHELNVVNTVDLRSLAARRLSNPELRNSGLKELTREILGKEIGKPRKVTMSRWDAEWLTYDQ 257          
BLAST of mRNA_F-serratus_M_contig75.18778.1 vs. uniprot
Match: A2XPE5_ORYSI (3'-5' exonuclease domain-containing protein n=1 Tax=Oryza sativa subsp. indica TaxID=39946 RepID=A2XPE5_ORYSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.290e-13
Identity = 50/138 (36.23%), Postives = 70/138 (50.72%), Query Frame = 0
Query:    1 VVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINGDCTRMEKFFGVKIAHAVDLTKLALIRKVPLGLKR-GLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQ 137
            VVG D+EW  A       P A  QL   +  LV QILH        +P +L   L D   TF GVG+  D  R+   +G+++  AVDL  LA        L+R GL  L   ++G  + K   VR+S W++++LSE+Q
Sbjct:   55 VVGLDVEWRPA--APVPGPVAVLQLCVDRRCLVFQILHADY-----VPDALSRFLADPRFTFVGVGVRDDAARLRVGYGLEVPRAVDLRALAADTLGRPDLRRAGLRALVREVMGVQMDKPHHVRVSAWDKRNLSEDQ 185          
BLAST of mRNA_F-serratus_M_contig75.18778.1 vs. uniprot
Match: UPI001C532302 (Werner Syndrome-like exonuclease n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C532302)

HSP 1 Score: 73.6 bits (179), Expect = 7.120e-13
Identity = 46/138 (33.33%), Postives = 74/138 (53.62%), Query Frame = 0
Query:    1 VVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINGDCTRMEKFFGVKIAHAVDLTKLALIR-KVPLGLKRGLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQ 137
            VVG D+EW  + S + E+  A  QL      L+ Q+L+  +     +P SL+  L + SLTF GVGI GD  ++     + + + VDL  LA  +  +P     GL +L   +LG+ + K  +V +SRW+ + L+ +Q
Sbjct:  129 VVGLDLEWRPSFSRSVEHRVAVLQLCVEGNCLIFQLLYADR-----IPTSLIEFLSNPSLTFVGVGIQGDVEKLLVDHELNVVNTVDLRSLAAKKLSIPELRDAGLKELTREVLGKEIGKPRKVTMSRWDAEWLTYDQ 261          
BLAST of mRNA_F-serratus_M_contig75.18778.1 vs. uniprot
Match: A0A1E5VPQ2_9POAL (3'-5' exonuclease domain-containing protein n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5VPQ2_9POAL)

HSP 1 Score: 73.9 bits (180), Expect = 1.110e-12
Identity = 44/123 (35.77%), Postives = 68/123 (55.28%), Query Frame = 0
Query:   16 HENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINGDCTRMEKFFGVKIAHAVDLTKLALIRKVPLGLK-RGLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQ 137
            H+ P A  QL  G+  LV QIL         +P +LVG L D  +TF GVG++ D  ++ + +G+++A AVDL +LA++      L   GL  L   ++G  + K   VR+S W+ + LS+ Q
Sbjct:  249 HKAPVAVLQLCVGRRCLVFQILRADY-----VPDALVGFLADDRITFVGVGVHNDAAKLREGYGLEVARAVDLRRLAVVELGNPALHGAGLQALVWEVMGLQMEKPHHVRVSAWDARRLSKAQ 366          
BLAST of mRNA_F-serratus_M_contig75.18778.1 vs. uniprot
Match: A0A2T7DH33_9POAL (3'-5' exonuclease domain-containing protein n=1 Tax=Panicum hallii var. hallii TaxID=1504633 RepID=A0A2T7DH33_9POAL)

HSP 1 Score: 70.5 bits (171), Expect = 7.530e-12
Identity = 49/138 (35.51%), Postives = 67/138 (48.55%), Query Frame = 0
Query:    1 VVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINGDCTRMEKFFGVKIAHAVDLTKLAL-IRKVPLGLKRGLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQ 137
            V G D+EW  A   A   P A  Q+      LV QIL         +PG L   L D   TF GVGI  D  ++   +G+++A AVDL +LA      P  L+ GL  L   ++G  + K   VR+S W+   LS++Q
Sbjct:  109 VAGLDVEWRPA-GRAPPGPVAVLQVCVDHRCLVFQILRADY-----VPGKLSAFLADRRFTFVGVGIRDDAAKLRAGYGLRVASAVDLRRLAADALGRPDLLRAGLQALVLEVMGVQMEKPHHVRVSAWDAAALSDDQ 240          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig75.18778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE8.860e-5063.043'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6P5EXU7_ANACO1.340e-1740.29Werner Syndrome-like exonuclease n=1 Tax=Ananas co... [more]
A0A199VKE8_ANACO1.450e-1640.29Werner Syndrome-like exonuclease n=1 Tax=Ananas co... [more]
B9FDW5_ORYSJ3.870e-1436.233'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A0E0IQK6_ORYNI4.730e-1436.963'-5' exonuclease domain-containing protein n=8 Ta... [more]
UPI001CC3C7934.790e-1434.78Werner Syndrome-like exonuclease n=1 Tax=Telopea s... [more]
A2XPE5_ORYSI1.290e-1336.233'-5' exonuclease domain-containing protein n=1 Ta... [more]
UPI001C5323027.120e-1333.33Werner Syndrome-like exonuclease n=1 Tax=Macadamia... [more]
A0A1E5VPQ2_9POAL1.110e-1235.773'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A2T7DH33_9POAL7.530e-1235.513'-5' exonuclease domain-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..139
e-value: 6.5E-31
score: 109.0
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 2..137
e-value: 7.1E-6
score: 25.8
NoneNo IPR availablePANTHERPTHR13620:SF65coord: 1..137
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 1..137
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig75contigF-serratus_M_contig75:887584..888003 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig75.18778.1mRNA_F-serratus_M_contig75.18778.1Fucus serratus malemRNAF-serratus_M_contig75 887584..888003 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig75.18778.1 ID=prot_F-serratus_M_contig75.18778.1|Name=mRNA_F-serratus_M_contig75.18778.1|organism=Fucus serratus male|type=polypeptide|length=140bp
VVGFDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGS
LVGLLEDASLTFTGVGINGDCTRMEKFFGVKIAHAVDLTKLALIRKVPLG
LKRGLADLCSHLLGRSLSKDGRVRLSRWNRKDLSEEQKT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_sf