prot_F-serratus_M_contig75.18768.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig75.18768.1
Unique Nameprot_F-serratus_M_contig75.18768.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length958
Homology
BLAST of mRNA_F-serratus_M_contig75.18768.1 vs. uniprot
Match: D7FQ90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ90_ECTSI)

HSP 1 Score: 471 bits (1212), Expect = 7.900e-150
Identity = 367/726 (50.55%), Postives = 424/726 (58.40%), Query Frame = 0
Query:  347 MPAAKVKADVISLTSAIHACSGPAGNWEKAYQLLDGMWQDDTGPRPNKRTYDLVIQACGNGGEWELAVALVDDMRDLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWKRAIEVFDEARYVRGXXXXXXXXXXXXXXXXXXXXXXXXSLYFDRMIADGIAPDATAACKGTLAAAELRDGRRALSILEGEKPQRLRDRRL-------------GSEARSADDPLVASPSEAGA-KAKGCR-----RARVEGEXXXXXXXXXXXXXXXEKKR--------------------------------------------------------GGWEAATPSLLNSVLHALDSAGEDAAVLETVERGREKGVKLNGGVYRSALKACGNLGDHDRATALLGRMVEEERITPDIVHWNHALRASATTARWREARSLLEEMRSCDVSPDEFSYSMALKACSAGLWSGDSWSNS-GWSTPDEKDQEEDEELSP---ILRTQGSRDGG---RRGGLPAGGRAKNAIELLQEMESLGIRVRERSFNLAMAACLEGHRDGCTETGHGK-----PPDADIRLAEAALSLFDQLIEAEETPTVLSYALALKACARTANKRRASDLLFDMLQ--------------------AAEDGSSEGAGANAPL--------HIRPGHLESAIAAYNAAEDGAGAQELWRQALRWGVSPRSLG 957
            MPAAKVK DVIS TSAIHAC+GP GNWEKAYQLLD MWQD  G +P+K TYDLVIQACG+GGEWEL V L+DDMRDLG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EWKRA E+FD+ARYV                           +Y DRM+ADG+A DA A     LAAAEL DGRRALS+LEG +  + R  R              GS+ R   D L      AG  +  G R     +  +EGE                +KR                                                        GGWE  TP LLNSVL ALD   ED+AVLE V+RGREKG+ LN  +YR ALKACGNLGD+ +A  +L RM EE  +TPDIVHWNHALRASA  ARW+E R  L+EM +   +PDEFSYSMALKACSAGLWSGDSW +S GW        EED   S     L ++G  D     +   +P   R K+AIELLQEM+  G+R+   ++ LAMAACLEGHRD   E   G      PP AD+RLAEA L LFD+L+ A ETPT  +YA ALKACARTAN +RA+ L + ML                     A+ D  + G   ++P          +RP HL S I AY+AA D AGA++LW +ALR GVSPRS G
Sbjct:    1 MPAAKVKPDVISFTSAIHACAGPTGNWEKAYQLLDAMWQDPEGAKPSKHTYDLVIQACGHGGEWELGVTLIDDMRDLGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEWKRATEIFDQARYVHRIRPSLQIYGALLGALAEGERWADVLVYLDRMVADGVARDAAATNTAVLAAAELGDGRRALSLLEGGEGSQQRGGRQRGVARDVVGEEGGGSDNRQLCDGLQRRRRPAGVDEGDGIRGVVLGQGELEGEPEALLERRQRAATAGGEKRHGEESEVRARTRIRSSSEAAGERQGVVADENGVDEEAQDGTRRTERDSDSVDDGVGGGWEGVTPGLLNSVLRALDEQDEDSAVLEAVKRGREKGILLNQSIYRCALKACGNLGDYQQANDILVRMAEES-LTPDIVHWNHALRASAACARWQETRLRLQEMETFGSTPDEFSYSMALKACSAGLWSGDSWCDSRGWGA------EEDTSSSRRRNALSSEGQLDSSGDKQEPKVPQACRGKSAIELLQEMKQRGVRLSAHAYTLAMAACLEGHRDRHPELEAGLDKEKGPPSADLRLAEATLLLFDRLVAAGETPTADAYAHALKACARTANPQRANALFWVMLDDASPPAAVRTSSTASSLCNGASGDHVASGQRRHSPPPSPPQPRPEVRPWHLASTIVAYDAAGDWAGAKQLWDEALRRGVSPRSPG 719          
BLAST of mRNA_F-serratus_M_contig75.18768.1 vs. uniprot
Match: A0A6H5L2A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A2_9PHAE)

HSP 1 Score: 465 bits (1197), Expect = 4.900e-143
Identity = 384/774 (49.61%), Postives = 439/774 (56.72%), Query Frame = 0
Query:  295 VARSGREDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLLEVEMPAAKVKADVISLTSAIHACSGPAGNWEKAYQLLDGMWQDDTGPRPNKRTYDLVIQACGNGGEWELAVALVDDMRDLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWKRAIEVFDEARYVRGXXXXXXXXXXXXXXXXXXXXXXXXSLYFDRMIADGIAPDATAACKGTLAAAELRDGRRALSILEGEKPQRLRDRRL--------GSEARSADD------------PLVASPSEAG------------------------AKAKGCRRARVEGEXXXXXXXXXXXXXXXEKKR------------------------------GGWEAATPSLLNSVLHALDSAGEDAAVLETVERGREKGVKLNGGVYRSALKACGNLGDHDRATALLGRMVEEERITPDIVHWNHALRASATTARWREARSLLEEMRSCDVSPDEFSYSMALKACSAGLWSGDSWSNS-GWSTPDEKDQEEDEELSPILRTQGSRDGG---RRGGLPAGGRAKNAIELLQEMESLGIRVRERSFNLAMAACLEGHRDGCTETGHGK-----PPDADIRLAEAALSLFDQLIEAEETPTVLSYALALKACARTANKRRASDLLFDMLQAAE------------------------DGSSEGAGANAPLH----IRPGHLESAIAAYNAAEDGAGAQELWRQALRWGVSPRSLG 957
            VARSGREDVA           XXXXXXXXXXXX              LLEV+MPAAKVK             +GP GNWEKAYQLLD MWQD  G +P+K TYDLVIQACG+GGEWEL V L+DDMRDLG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EWKRA E+FDEARYV                           +Y DRM+ADG+A DA A     LAAAEL DGRRALS+LEG +  + R  R         G E   +D+            P      + G                        A A G +R   E E               E++                               GGWE  TP LL SVL ALD   ED+AVLE V+RGREKGV LN  +YR ALKACGNLGD+D+A  +L RM EE  +TPDIVHWNHALRASA  ARW+E R  L+EM +   +PDEFSYSMALKACSAGLWSGDSW +S GW   ++K           L  +G  DG    +   +P   R KNAIELLQEM+  G+R+   ++ LAMAACLEGHRD   E   G      PP AD+RLAEAAL LFD+L+ A ETPT  +YA ALKACARTAN +RA+ L + ML AA                         DG    +   +P      +RP HL SAIAAY+AA D  GA++LW +ALR GVSPRS G
Sbjct:  366 VARSGREDVALALLNRMRIDGXXXXXXXXXXXXDACASREKWQEAVELLEVDMPAAKVKXXXXXXXXXXXXXAGPTGNWEKAYQLLDAMWQDPEGAKPSKHTYDLVIQACGHGGEWELGVTLIDDMRDLGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEWKRATEIFDEARYVHRIRPSLQIYGALLGALAEGERWADVLVYMDRMVADGVARDAAATNTAVLAAAELGDGRRALSLLEGGEGSQQRGGRQREMVRDAGGEEGGGSDNRLLWDGLQRRRRPAAVDEGDGGRGVVLGQGELEGETEALLGRRQRAATAAGEKRHGEESEVRARTRIRPCPEAARERQGVLGEQNCVDEESEDGTRRTGGDSDSVDDGVGGWEGVTPGLLISVLRALDEQDEDSAVLEAVKRGREKGVLLNPSIYRCALKACGNLGDYDQANDILVRMAEES-LTPDIVHWNHALRASAACARWQETRLRLKEMETSGSTPDEFSYSMALKACSAGLWSGDSWCDSRGWGAEEDKSSCR---RKNALNGEGQLDGSGDKKEPKVPQACRGKNAIELLQEMKQRGVRLSAHAYTLAMAACLEGHRDRHPELEAGLDKEKGPPSADLRLAEAALLLFDRLVAAGETPTADAYAHALKACARTANPQRANALFWFMLDAASPPAAVQTSSNLSSLRNGASGNYVADGQRRHSRPPSPPQPRPEVRPWHLASAIAAYDAAGDWTGAKQLWDEALRRGVSPRSPG 1135          
BLAST of mRNA_F-serratus_M_contig75.18768.1 vs. uniprot
Match: D7FQ89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ89_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 3.510e-5
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 0
Query:   10 IMAAGRQGRWAEVLRVLGRWEKQANTRAKLDTKTYNFAVSALGKC 54
            +MAA R+ RW EVL +LG WE+ A    +LD KTYN A+SALGKC
Sbjct:    1 MMAAARRRRWTEVLEILGHWEENAG---RLDAKTYNVALSALGKC 42          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig75.18768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQ90_ECTSI7.900e-15050.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2A2_9PHAE4.900e-14349.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ89_ECTSI3.510e-560.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 392..440
e-value: 2.0E-7
score: 31.1
coord: 700..747
e-value: 4.6E-8
score: 33.1
coord: 40..86
e-value: 5.6E-8
score: 32.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 669..695
e-value: 0.94
score: 9.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 135..193
e-value: 4.5E-10
score: 39.5
coord: 205..265
e-value: 6.2E-5
score: 23.0
coord: 271..331
e-value: 1.4E-12
score: 47.4
coord: 451..510
e-value: 6.4E-5
score: 22.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 396..429
e-value: 8.0E-7
score: 26.9
coord: 43..76
e-value: 1.6E-6
score: 25.9
coord: 77..107
e-value: 6.9E-7
score: 27.1
coord: 149..183
e-value: 1.8E-4
score: 19.5
coord: 286..319
e-value: 2.4E-6
score: 25.4
coord: 431..464
e-value: 0.0026
score: 15.8
coord: 220..253
e-value: 8.5E-4
score: 17.3
coord: 114..148
e-value: 1.4E-4
score: 19.8
coord: 184..217
e-value: 0.0013
score: 16.8
coord: 321..355
e-value: 5.0E-4
score: 18.1
coord: 502..535
e-value: 4.3E-5
score: 21.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 112..146
score: 11.06
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 147..181
score: 10.643
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 630..664
score: 6.248
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 75..109
score: 11.86
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..216
score: 9.591
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 919..953
score: 5.875
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 355..390
score: 8.55
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 463..498
score: 9.613
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 665..700
score: 7.651
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 319..354
score: 9.558
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 284..318
score: 12.003
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 871..901
score: 5.766
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 393..427
score: 11.334
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..283
score: 5.404
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 428..462
score: 9.262
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 701..735
score: 9.756
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 40..74
score: 12.386
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 217..251
score: 10.249
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 499..533
score: 9.12
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 794..956
e-value: 1.3E-11
score: 46.4
coord: 621..778
e-value: 5.7E-23
score: 83.7
coord: 120..264
e-value: 2.5E-39
score: 137.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 9..110
e-value: 3.2E-24
score: 87.2
coord: 368..472
e-value: 7.9E-25
score: 89.2
coord: 473..564
e-value: 4.2E-14
score: 54.3
coord: 265..367
e-value: 2.8E-28
score: 100.5
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 263..420
coord: 22..167
coord: 346..537
coord: 665..747
coord: 160..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig75contigF-serratus_M_contig75:712388..726228 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig75.18768.1mRNA_F-serratus_M_contig75.18768.1Fucus serratus malemRNAF-serratus_M_contig75 711801..726291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig75.18768.1 ID=prot_F-serratus_M_contig75.18768.1|Name=mRNA_F-serratus_M_contig75.18768.1|organism=Fucus serratus male|type=polypeptide|length=958bp
MDAYRLRGSIMAAGRQGRWAEVLRVLGRWEKQANTRAKLDTKTYNFAVSA
LGKCGRWREAIDTLDRMRGMGVPPDVYSWNTAISACGRVGEWEHALKLLA
RMEESGSEARPDIFSYNGAIGAAAKAGRWTQALELLERIDDRGLTPDVIS
YTSAMSACDKAGEWQRALDIMGLMLERRVEPNIVSYGAAISACARGGCWQ
QALCLLREVSSRGLTANAHVYGSAMHACVKGGEHKRALPLLAEMVKVGVV
PDAVAFTAAMTAVGDWTAALRLLEIMKSQGVSPDTVAYNAALSAVARSGR
EDVALALLEEMRTNGCSPNLVSFNTAIDACASRGNWREAVRLLEVEMPAA
KVKADVISLTSAIHACSGPAGNWEKAYQLLDGMWQDDTGPRPNKRTYDLV
IQACGNGGEWELAVALVDDMRDLGIKPDAQTFNIAAAACARAGESLAAET
LVASMWRSGVAPDEFSYASLVAACDRAGEWKRAIEVFDEARYVRGVRPSL
QIYGALISALTSAEQWVKASLYFDRMIADGIAPDATAACKGTLAAAELRD
GRRALSILEGEKPQRLRDRRLGSEARSADDPLVASPSEAGAKAKGCRRAR
VEGEQGAEAEGEPGVRFDGEKKRGGWEAATPSLLNSVLHALDSAGEDAAV
LETVERGREKGVKLNGGVYRSALKACGNLGDHDRATALLGRMVEEERITP
DIVHWNHALRASATTARWREARSLLEEMRSCDVSPDEFSYSMALKACSAG
LWSGDSWSNSGWSTPDEKDQEEDEELSPILRTQGSRDGGRRGGLPAGGRA
KNAIELLQEMESLGIRVRERSFNLAMAACLEGHRDGCTETGHGKPPDADI
RLAEAALSLFDQLIEAEETPTVLSYALALKACARTANKRRASDLLFDMLQ
AAEDGSSEGAGANAPLHIRPGHLESAIAAYNAAEDGAGAQELWRQALRWG
VSPRSLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf