prot_F-serratus_M_contig75.18754.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig75.18754.1
Unique Nameprot_F-serratus_M_contig75.18754.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length185
Homology
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: D7FQ94_ECTSI (Small nucleolar ribonucleoprotein U3 component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ94_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 3.010e-113
Identity = 164/184 (89.13%), Postives = 176/184 (95.65%), Query Frame = 0
Query:    1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLLGEG 184
            MRKLKYHEQKLLKKVDFLQWKSD+NIREIQ+LRRYL+QNRDDY KYNKIVGLITK+TA+LKTLDASDEFRIKMT QLL+KLF+MGIIN KKSLAKTE  +VS+FCRRRLPVVMVRLKMSETLTEA T+IEQGHVRVGPHAVTDPA+LVTRSMEDFVTWVD SKIKRAIK YEDK+DDFDLLGEG
Sbjct:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIQVLRRYLVQNRDDYVKYNKIVGLITKLTARLKTLDASDEFRIKMTEQLLEKLFAMGIINTKKSLAKTETASVSSFCRRRLPVVMVRLKMSETLTEATTYIEQGHVRVGPHAVTDPAFLVTRSMEDFVTWVDGSKIKRAIKTYEDKVDDFDLLGEG 184          
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: A0A836CN51_9STRA (Small nucleolar ribonucleoprotein U3 component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN51_9STRA)

HSP 1 Score: 283 bits (723), Expect = 4.080e-95
Identity = 140/184 (76.09%), Postives = 161/184 (87.50%), Query Frame = 0
Query:    1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLLGEG 184
            MRKLKYHEQKLLKKVDFLQWKSD+NIREI++LRRY IQ+R+DY KYN++VG +T + AKLKTL ++D FR+KMT QLL KL S+G+I+ +KSL K E +TVSAFCRRRLPVVMVR KMSETL EA TFIE GH+RVGP+ VTDPA+LVTR+MEDFVTWVDSSKIKR I  Y DKLDDFDLLGEG
Sbjct:    1 MRKLKYHEQKLLKKVDFLQWKSDQNIREIKVLRRYHIQDREDYVKYNRLVGHVTSLAAKLKTLSSTDPFRVKMTSQLLSKLQSIGVIDTEKSLIKAEQLTVSAFCRRRLPVVMVRAKMSETLREAITFIESGHIRVGPNVVTDPAFLVTRTMEDFVTWVDSSKIKRTIAKYNDKLDDFDLLGEG 184          
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: A0A6S9JYI8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JYI8_HETAK)

HSP 1 Score: 278 bits (711), Expect = 2.650e-93
Identity = 137/182 (75.27%), Postives = 159/182 (87.36%), Query Frame = 0
Query:    1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLLG 182
            MRKLK+HEQKLLKKVDFLQWKSD+NIREI+I+RRYL+Q+R+DYTKYNKI G + K+ AKL+ L  +D+FRIKMT  LL+KLF+MG+IN+KKSL   E + VSAFCRRRLPVVMVRLKMSET+ EA TFIE GHVRVGPH VTDPA+LV R+MEDF+TWVDSSKIKR I  Y DKLDD+DLLG
Sbjct:    1 MRKLKHHEQKLLKKVDFLQWKSDQNIREIKIIRRYLLQDREDYTKYNKICGHMWKLVAKLRALPPTDQFRIKMTEDLLEKLFNMGVINSKKSLQLVEKVNVSAFCRRRLPVVMVRLKMSETIKEAITFIEHGHVRVGPHCVTDPAFLVPRAMEDFLTWVDSSKIKRTIMKYNDKLDDYDLLG 182          
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: W7TBD6_9STRA (Ribosomal protein S4/S9 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBD6_9STRA)

HSP 1 Score: 271 bits (694), Expect = 1.030e-90
Identity = 137/182 (75.27%), Postives = 156/182 (85.71%), Query Frame = 0
Query:    1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLLG 182
            MR+L++HEQKLLKKVDFLQWKSD+NIREI+ILRRY IQ+R+DY KYNKI G ITK+TAKLK L   DEFRIKMT  LL KL++MG+I  KKSL++ E +  SAFCRRRLPVVMVR+KM+ETL EA TFIEQGHVRVGP  VTDP +LVTRS EDF+TWVDSSKIKRA+  Y DKLDDFDLLG
Sbjct:    1 MRQLRHHEQKLLKKVDFLQWKSDQNIREIKILRRYHIQDREDYVKYNKICGHITKLTAKLKDLKPEDEFRIKMTDDLLSKLYNMGLIPTKKSLSQCETLAASAFCRRRLPVVMVRMKMAETLKEAVTFIEQGHVRVGPTVVTDPTFLVTRSQEDFLTWVDSSKIKRAVVAYNDKLDDFDLLG 182          
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: D8UBE0_VOLCA (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=D8UBE0_VOLCA)

HSP 1 Score: 261 bits (666), Expect = 1.830e-86
Identity = 128/181 (70.72%), Postives = 154/181 (85.08%), Query Frame = 0
Query:    1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLL 181
            MR+LKYHEQKLLKKVDFL+WKSD N+RE+Q+LRRY IQ+RDDY KYNKI G+ITK+T+ LK LD  D  RI++T QLL+KL++MG++  KKSL + + +  +AFCRRRL VVMVRLKMSETL EAATFIEQGHVRVGP  VTDPA+ VTR+MEDFVTWVD+SK+KR +  Y DKLDD+DLL
Sbjct:    1 MRQLKYHEQKLLKKVDFLRWKSDDNVRELQVLRRYHIQDRDDYKKYNKICGMITKLTSMLKRLDPKDATRIELTDQLLEKLYNMGVLPTKKSLVQCDKLATAAFCRRRLAVVMVRLKMSETLREAATFIEQGHVRVGPDTVTDPAFHVTRNMEDFVTWVDTSKVKRKVLKYNDKLDDYDLL 181          
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: E1ZQC4_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQC4_CHLVA)

HSP 1 Score: 259 bits (661), Expect = 1.090e-85
Identity = 125/181 (69.06%), Postives = 153/181 (84.53%), Query Frame = 0
Query:    1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLL 181
            MRKLK+HE KLL+KVDFLQWK++ N RE+Q++RRY IQ+RDDY+KYNK+ G++TK+ A LK LDA D  RI++T QLLDKL +MG+I  KKSL + E ++ ++FCRRRL V+MVRLKMSETL EA TFIEQGHVRVGP  VTDPA+LVTRSMEDFVTWVD+SKIKR +  Y DKLDDFD++
Sbjct:    1 MRKLKHHEHKLLRKVDFLQWKNEHNQRELQVMRRYHIQDRDDYSKYNKVCGMVTKLVATLKRLDARDSTRIELTDQLLDKLHNMGVITTKKSLVQLEKLSTASFCRRRLSVIMVRLKMSETLREACTFIEQGHVRVGPDTVTDPAFLVTRSMEDFVTWVDTSKIKRKVLRYNDKLDDFDIM 181          
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: L1JBM1_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JBM1_GUITC)

HSP 1 Score: 258 bits (659), Expect = 2.200e-85
Identity = 125/181 (69.06%), Postives = 149/181 (82.32%), Query Frame = 0
Query:    1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLL 181
            MR+LKYHE+KLLKKV+F QWKSD+N+REIQILRRY +QNRDDY KYNKI GLITK+T+KLK L   D  R+K T  L+DKL++MG+I+ KKSL + E I  SAFCRRRLPVV+VRLK  E L EA TF+EQGH+R+GP  VTDPA+ VTRSMEDF+TWVDSSKI+R +  Y D +DDFDLL
Sbjct:    1 MRQLKYHEEKLLKKVNFFQWKSDKNVREIQILRRYRVQNRDDYHKYNKIAGLITKLTSKLKELRQDDPTRVKTTELLIDKLYNMGLISTKKSLLQCEKIPTSAFCRRRLPVVLVRLKFCENLKEAVTFVEQGHIRIGPEVVTDPAFHVTRSMEDFITWVDSSKIRRKVMKYNDAVDDFDLL 181          
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: A0A7S1X290_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X290_9CHLO)

HSP 1 Score: 258 bits (658), Expect = 3.020e-85
Identity = 125/181 (69.06%), Postives = 155/181 (85.64%), Query Frame = 0
Query:    1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLL 181
            MR+LK+HEQKLLKKV+FLQWKS+ N+RE+Q++RRY IQNRDDY  YNKI G +TK+TA L+ LD+ D  RI++T +LLDKL++MG+++ KKSL + E I+ ++FCRRRL VVMVRLKMSETL EA TFIEQGHVRVGP+ VTDPA+LVTR+ EDFVTWVD+SKIKR +  Y DKLDD+DLL
Sbjct:    1 MRQLKHHEQKLLKKVNFLQWKSEHNMREVQVMRRYHIQNRDDYKSYNKICGHVTKLTAVLRKLDSRDPVRIELTDKLLDKLYNMGVLSTKKSLLQVEKISTASFCRRRLAVVMVRLKMSETLKEAVTFIEQGHVRVGPNTVTDPAFLVTRNFEDFVTWVDTSKIKRKVMKYNDKLDDYDLL 181          
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: A8IEP3_CHLRE (Small nucleolar ribonucleoprotein U3 component n=4 Tax=Chlamydomonadales TaxID=3042 RepID=A8IEP3_CHLRE)

HSP 1 Score: 256 bits (653), Expect = 1.740e-84
Identity = 125/181 (69.06%), Postives = 154/181 (85.08%), Query Frame = 0
Query:    1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLL 181
            MR+LK+HEQKLLKKVDFL+WKSD N+RE+Q++RRY IQ+RDDY KYNKI G++TK+T+ LK LDA D  R+++T QLL+KL +MGII  KKSL + + +  ++FCRRRL VVMVRLKM+ETL EAATFIEQGHVRVGP  VTDPA+ VTR+MEDFVTWVD+SK+KR +  Y DKLDD+DLL
Sbjct:    1 MRQLKHHEQKLLKKVDFLRWKSDDNVRELQVMRRYHIQDRDDYKKYNKISGMVTKLTSMLKQLDAKDPARVELTDQLLEKLHAMGIIPTKKSLVQCDKLPTASFCRRRLAVVMVRLKMAETLREAATFIEQGHVRVGPDTVTDPAFHVTRNMEDFVTWVDTSKVKRKVLKYNDKLDDYDLL 181          
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Match: A0A7S3HSU8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HSU8_9STRA)

HSP 1 Score: 255 bits (652), Expect = 2.640e-84
Identity = 125/182 (68.68%), Postives = 150/182 (82.42%), Query Frame = 0
Query:    1 MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIVGLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAITVSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTRSMEDFVTWVDSSKIKRAIKNYEDKLDDFDLLG 182
            MR+LK+HE+KLLKKVDF  WK D+ IRE  I+R+YL+Q R+DY KYNKIVG +TK+ AKLKT+ A D  R +++ Q+L KL++MGI+N   SL+  E +TVSAFCRRRLPVVMVRLKMSE L EA TFIEQGHVRVGP+ +TDPA+LVTR+ ED+VTWVDSSKIKR I  Y DKLDDFDLLG
Sbjct:    2 MRELKHHEKKLLKKVDFFSWKDDQTIREATIIRKYLLQEREDYMKYNKIVGGVTKLCAKLKTMPAEDPVRYQLSTQILQKLYNMGIVNKTSSLSAIEKLTVSAFCRRRLPVVMVRLKMSENLKEATTFIEQGHVRVGPNVITDPAFLVTRTFEDYVTWVDSSKIKRTIMKYNDKLDDFDLLG 183          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig75.18754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ94_ECTSI3.010e-11389.13Small nucleolar ribonucleoprotein U3 component n=2... [more]
A0A836CN51_9STRA4.080e-9576.09Small nucleolar ribonucleoprotein U3 component n=1... [more]
A0A6S9JYI8_HETAK2.650e-9375.27Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TBD6_9STRA1.030e-9075.27Ribosomal protein S4/S9 n=3 Tax=Monodopsidaceae Ta... [more]
D8UBE0_VOLCA1.830e-8670.72Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
E1ZQC4_CHLVA1.090e-8569.06Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
L1JBM1_GUITC2.200e-8569.06Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S1X290_9CHLO3.020e-8569.06Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A8IEP3_CHLRE1.740e-8469.06Small nucleolar ribonucleoprotein U3 component n=4... [more]
A0A7S3HSU8_9STRA2.640e-8468.68Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 107..172
e-value: 1.9E-7
score: 40.7
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 107..153
e-value: 6.6E-12
score: 45.0
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 107..171
score: 10.233
IPR001912Ribosomal protein S4/S9, N-terminalSMARTSM01390Ribosomal_S4_2coord: 3..106
e-value: 1.4E-26
score: 104.3
IPR001912Ribosomal protein S4/S9, N-terminalPFAMPF00163Ribosomal_S4coord: 3..62
e-value: 1.1E-7
score: 32.6
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 108..179
e-value: 1.4E-7
score: 33.5
IPR022801Ribosomal protein S4/S9PANTHERPTHR1183130S 40S RIBOSOMAL PROTEINcoord: 1..180
NoneNo IPR availablePANTHERPTHR11831:SF1U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3coord: 1..180
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 24..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig75contigF-serratus_M_contig75:377101..381259 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig75.18754.1mRNA_F-serratus_M_contig75.18754.1Fucus serratus malemRNAF-serratus_M_contig75 371352..381259 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig75.18754.1 ID=prot_F-serratus_M_contig75.18754.1|Name=mRNA_F-serratus_M_contig75.18754.1|organism=Fucus serratus male|type=polypeptide|length=185bp
MRKLKYHEQKLLKKVDFLQWKSDRNIREIQILRRYLIQNRDDYTKYNKIV
GLITKITAKLKTLDASDEFRIKMTRQLLDKLFSMGIINAKKSLAKTEAIT
VSAFCRRRLPVVMVRLKMSETLTEAATFIEQGHVRVGPHAVTDPAYLVTR
SMEDFVTWVDSSKIKRAIKNYEDKLDDFDLLGEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR001912Ribosomal_S4/S9_N
IPR036986S4_RNA-bd_sf
IPR022801Ribosomal_S4/S9