prot_F-serratus_M_contig75.18752.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig75.18752.1
Unique Name	prot_F-serratus_M_contig75.18752.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	113

Homology

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BLAST of mRNA_F-serratus_M_contig75.18752.1 vs. uniprot
Match: A0A6H5L288_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L288_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 6.640e-48
Identity = 79/108 (73.15%), Postives = 88/108 (81.48%), Query Frame = 0

Query:    1 GVESAAVLGAVLAAAWGGWMAGQHAEKLFWGIVMAVAGGIIGNWFSDLNQGGEGRVNWGNWRCNALAFAGLVSAGRYAASLEPEERLAVLESAFFPALVGQGIGTISG 108
            G E  A++ AV A AWG WMAGQH  KL WGI+MAV GGIIGNWFS LN G EGR+ WG+WRCNAL+FAG+++AGRYAASLEPEER A LESAFF ALV QG GTISG
Sbjct:  146 GAEKTALVAAVAAMAWGSWMAGQHPHKLGWGIIMAVMGGIIGNWFSTLNGGAEGRIVWGDWRCNALSFAGVITAGRYAASLEPEEREATLESAFFVALVAQGFGTISG 253

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig75.18752.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig75.18752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L288_9PHAE	6.640e-48	73.15	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..17
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 46..113
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..17
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 18..26
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 27..45
None	No IPR available	TMHMM	TMhelix		coord: 4..21
None	No IPR available	TMHMM	TMhelix		coord: 28..45

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig75	contig	F-serratus_M_contig75:348734..349668 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig75.18752.1	mRNA_F-serratus_M_contig75.18752.1	Fucus serratus male	mRNA	F-serratus_M_contig75 348734..349668 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig75.18752.1 ID=prot_F-serratus_M_contig75.18752.1|Name=mRNA_F-serratus_M_contig75.18752.1|organism=Fucus serratus male|type=polypeptide|length=113bp
GVESAAVLGAVLAAAWGGWMAGQHAEKLFWGIVMAVAGGIIGNWFSDLNQ
GGEGRVNWGNWRCNALAFAGLVSAGRYAASLEPEERLAVLESAFFPALVG
QGIGTISGEPRRE