prot_F-serratus_M_contig75.18742.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig75.18742.1
Unique Nameprot_F-serratus_M_contig75.18742.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length131
Homology
BLAST of mRNA_F-serratus_M_contig75.18742.1 vs. uniprot
Match: D7FQB6_ECTSI (Ribosomal_S17_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB6_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 9.410e-86
Identity = 122/130 (93.85%), Postives = 128/130 (98.46%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKSAKEGTYVDKKCPFTGDVSIRGRILKGLVISAGKMRNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCSPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVAVKKQFRMF 130
            MRFVKNVGLGFKTPK+A+EGTYVDKKCPFTGDVSIRGRILKGLVISAGKM NTIVIRRDYLH+VSKYRRFEKRHKNMTVHC+PCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHE CINTAV+V+KQFRMF
Sbjct:   62 MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEPCINTAVSVRKQFRMF 191          
BLAST of mRNA_F-serratus_M_contig75.18742.1 vs. uniprot
Match: A0A835Z9X9_9STRA (Ribosomal protein S17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X9_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.240e-75
Identity = 107/130 (82.31%), Postives = 120/130 (92.31%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKSAKEGTYVDKKCPFTGDVSIRGRILKGLVISAGKMRNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCSPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVAVKKQFRMF 130
            MRF KN+GLGFKTPK A  GTYVDKKCPFTG+VSIRGRILKGLV+SAGKM+NT VIRRDYLHYV+KYRRFEKRHKN+ VH SPC+ NVKEGDI+T+GQCRPLSKT+RFN LEHE CINT+++VKKQFRMF
Sbjct:   35 MRFYKNIGLGFKTPKLAISGTYVDKKCPFTGNVSIRGRILKGLVLSAGKMKNTCVIRRDYLHYVTKYRRFEKRHKNLMVHLSPCFPNVKEGDILTVGQCRPLSKTIRFNALEHEPCINTSISVKKQFRMF 164          
BLAST of mRNA_F-serratus_M_contig75.18742.1 vs. uniprot
Match: A0A7S2XWS0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWS0_9STRA)

HSP 1 Score: 219 bits (557), Expect = 4.770e-71
Identity = 105/130 (80.77%), Postives = 116/130 (89.23%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKSAKEGTYVDKKCPFTGDVSIRGRILKGLVISAGKMRNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCSPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVAVKKQFRMF 130
            MRF KN+GLGFKTPK A EGTYVDKKCPFTG+VSIRGRILKGLVIS  KM+NTI++RRDYLHY+SKYRRFEKRHKNM VH SPC+  +KEGD+VTIGQCRPLSKTVRFNVLEH   +N A+ VKKQFRMF
Sbjct:   37 MRFYKNIGLGFKTPKLAIEGTYVDKKCPFTGNVSIRGRILKGLVIST-KMKNTIIVRRDYLHYISKYRRFEKRHKNMAVHASPCFDTIKEGDVVTIGQCRPLSKTVRFNVLEHLPSVNQALNVKKQFRMF 165          
BLAST of mRNA_F-serratus_M_contig75.18742.1 vs. uniprot
Match: F0XZW5_AURAN (Ribosomal_S17_N domain-containing protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0XZW5_AURAN)

HSP 1 Score: 209 bits (531), Expect = 4.640e-67
Identity = 99/130 (76.15%), Postives = 117/130 (90.00%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKSAKEGTYVDKKCPFTGDVSIRGRILKGLVISAGKMRNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCSPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVAVKKQFRMF 130
            MR+V+NVGLGFKTPK A EG+YVDKKCPFTG+VSIRGRILKG+VIS  KM+ T+VIRRDYL++  KYRRFEKRHKNM+VHCSPC++NVKEGDIVT+GQCRPL+KTVRFNVL HE  +N ++ VKK FR+F
Sbjct:   39 MRYVRNVGLGFKTPKLALEGSYVDKKCPFTGNVSIRGRILKGMVIST-KMKRTLVIRRDYLNWCGKYRRFEKRHKNMSVHCSPCFENVKEGDIVTVGQCRPLTKTVRFNVLTHEPAVNQSLNVKKVFRVF 167          
BLAST of mRNA_F-serratus_M_contig75.18742.1 vs. uniprot
Match: A0A812UUF3_SYMMI (RPS11 protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UUF3_SYMMI)

HSP 1 Score: 207 bits (527), Expect = 5.440e-67
Identity = 97/130 (74.62%), Postives = 116/130 (89.23%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKSAKEGTYVDKKCPFTGDVSIRGRILKGLVISAGKMRNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCSPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVAVKKQFRMF 130
            MRF K+VGLGFKTPK+A EG+YVDKKCPFTG+VSIRGRILKG+V+S  KM+ T+VIRRDYL YV KYRRFEKRH NM+VHCSPC+QNV EGD+VT+GQCRPL+KTV+FNVLEH+  +N ++ VKK FR+F
Sbjct:    1 MRFYKSVGLGFKTPKAASEGSYVDKKCPFTGNVSIRGRILKGIVVST-KMKRTVVIRRDYLQYVRKYRRFEKRHANMSVHCSPCFQNVCEGDVVTVGQCRPLAKTVKFNVLEHQPAVNKSLNVKKIFRVF 129          
BLAST of mRNA_F-serratus_M_contig75.18742.1 vs. uniprot
Match: A0A7S4WCA2_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WCA2_9DINO)

HSP 1 Score: 208 bits (529), Expect = 8.760e-67
Identity = 99/130 (76.15%), Postives = 112/130 (86.15%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKSAKEGTYVDKKCPFTGDVSIRGRILKGLVISAGKMRNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCSPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVAVKKQFRMF 130
            MR+ KNVGLG KTPK+A EGTYVDKKCPFTGDV+IRGRILKGLVIS  KM  TI++RRDYLHY+ KYRR+EKRHKN+ VHCSP +  V EGD+VTIGQCRPLSKTVRFNV+EH   +N A+ VKKQFRMF
Sbjct:   37 MRWTKNVGLGIKTPKNAVEGTYVDKKCPFTGDVAIRGRILKGLVIST-KMTRTIIVRRDYLHYIRKYRRYEKRHKNVAVHCSPAFDTVSEGDVVTIGQCRPLSKTVRFNVIEHLPTVNKAINVKKQFRMF 165          
BLAST of mRNA_F-serratus_M_contig75.18742.1 vs. uniprot
Match: A0A7R9U3I9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3I9_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.000e-65
Identity = 95/130 (73.08%), Postives = 115/130 (88.46%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKSAKEGTYVDKKCPFTGDVSIRGRILKGLVISAGKMRNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCSPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVAVKKQFRMF 130
            MR+VKN+GLGFKTP+ A EG YVD+KCPFTG+VSIRG+ILKG+VIS  KM  T+V+RRDYLH+V KY+R+EKRHKNMTVHCSP + NVK GD+VT+GQCRPLSKT+RFNVL HE  +N +V+VKKQFR+F
Sbjct:   58 MRYVKNIGLGFKTPQRAIEGNYVDRKCPFTGNVSIRGKILKGIVIS-NKMTRTVVVRRDYLHFVRKYKRYEKRHKNMTVHCSPAFTNVKPGDVVTVGQCRPLSKTIRFNVLVHEPAVNQSVSVKKQFRVF 186          
BLAST of mRNA_F-serratus_M_contig75.18742.1 vs. uniprot
Match: A0A4D9CZU0_9STRA (Ribosomal_S17_N domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZU0_9STRA)

HSP 1 Score: 204 bits (518), Expect = 5.930e-65
Identity = 96/129 (74.42%), Postives = 111/129 (86.05%), Query Frame = 0
Query:    2 RFVKNVGLGFKTPKSAKEGTYVDKKCPFTGDVSIRGRILKGLVISAGKMRNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCSPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVAVKKQFRMF 130
            R+ + VGLGFKTPK AK GTYVDKKCPFTG VSIRGRILKG+V+S  KM  T++IRRDYLH+VSKY RFEKRHKN+  HCSP +  VKEGDIVT+GQCRPLSKTVRFNVL+HE  IN A+++KKQFR+F
Sbjct:   49 RWTREVGLGFKTPKEAKAGTYVDKKCPFTGSVSIRGRILKGIVLST-KMNRTVIIRRDYLHWVSKYSRFEKRHKNLAAHCSPAFPQVKEGDIVTVGQCRPLSKTVRFNVLQHEPSINQALSIKKQFRVF 176          
BLAST of mRNA_F-serratus_M_contig75.18742.1 vs. uniprot
Match: A0A7S1XVW4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVW4_9STRA)

HSP 1 Score: 201 bits (510), Expect = 7.070e-64
Identity = 93/130 (71.54%), Postives = 115/130 (88.46%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKSAKEGTYVDKKCPFTGDVSIRGRILKGLVISAGKMRNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCSPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVAVKKQFRMF 130
            +R+VK++GLGFKTP++A  G+YVDKKCPFTG+VSIRG+ILKG+VIS  KM+ TIV+RRDYLH+V KY+R+EKRHKN+T HCSPC+ NVK GD+VTIGQCRPL+KT+RFNVL HE   N +V VKKQFR+F
Sbjct:   38 IRYVKSIGLGFKTPETAISGSYVDKKCPFTGNVSIRGKILKGVVIS-NKMKRTIVVRRDYLHFVRKYKRYEKRHKNVTAHCSPCFVNVKPGDVVTIGQCRPLAKTIRFNVLTHEPSTNQSVNVKKQFRVF 166          
BLAST of mRNA_F-serratus_M_contig75.18742.1 vs. uniprot
Match: A0A7S1UA06_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA06_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.800e-62
Identity = 93/130 (71.54%), Postives = 115/130 (88.46%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKSAKEGTYVDKKCPFTGDVSIRGRILKGLVISAGKMRNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCSPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEACINTAVAVKKQFRMF 130
            +R+VK++GLGFKTP++A  G+YVDKKCPFTG+VSIRG+ILKG+VIS  KM+ TIV+RRDYLH+V KY+R+EKRHKN+T HCSPC+ NVK GD+VTIGQCRPL+KT+RFNVL HE   N +V VKKQFR+F
Sbjct:  141 IRYVKSIGLGFKTPETAISGSYVDKKCPFTGNVSIRGKILKGVVIS-NKMKRTIVVRRDYLHFVRKYKRYEKRHKNVTAHCSPCFVNVKPGDVVTIGQCRPLAKTIRFNVLTHEPSTNQSVNVKKQFRVF 269          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig75.18742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB6_ECTSI9.410e-8693.85Ribosomal_S17_N domain-containing protein n=1 Tax=... [more]
A0A835Z9X9_9STRA1.240e-7582.31Ribosomal protein S17-domain-containing protein n=... [more]
A0A7S2XWS0_9STRA4.770e-7180.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0XZW5_AURAN4.640e-6776.15Ribosomal_S17_N domain-containing protein n=3 Tax=... [more]
A0A812UUF3_SYMMI5.440e-6774.62RPS11 protein n=2 Tax=Symbiodinium microadriaticum... [more]
A0A7S4WCA2_9DINO8.760e-6776.15Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7R9U3I9_9STRA1.000e-6573.08Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9CZU0_9STRA5.930e-6574.42Ribosomal_S17_N domain-containing protein n=3 Tax=... [more]
A0A7S1XVW4_9STRA7.070e-6471.54Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1UA06_9STRA1.800e-6271.54Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Ribosomal protein S17/S11PRINTSPR00973RIBOSOMALS17coord: 101..108
score: 73.25
coord: 91..101
score: 63.27
coord: 57..80
score: 34.92
IPR000266Ribosomal protein S17/S11PFAMPF00366Ribosomal_S17coord: 42..112
e-value: 1.0E-26
score: 92.8
IPR000266Ribosomal protein S17/S11PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 1..130
IPR03244040S ribosomal protein S11, N-terminalPFAMPF16205Ribosomal_S17_Ncoord: 1..40
e-value: 2.4E-23
score: 82.3
IPR028333Ribosomal protein S17, archaeal/eukaryoticTIGRFAMTIGR03630TIGR03630coord: 21..113
e-value: 2.4E-31
score: 105.8
NoneNo IPR availableGENE3D2.40.50.1000coord: 1..130
e-value: 4.0E-61
score: 207.2
NoneNo IPR availablePANTHERPTHR10744:SF25coord: 1..130
NoneNo IPR availablePRODOMPD001295coord: 38..108
e-value: 5.0E-25
score: 278.0
IPR019979Ribosomal protein S17, conserved sitePROSITEPS00056RIBOSOMAL_S17coord: 91..103
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 36..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig75contigF-serratus_M_contig75:78278..79683 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig75.18742.1mRNA_F-serratus_M_contig75.18742.1Fucus serratus malemRNAF-serratus_M_contig75 72637..80447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig75.18742.1 ID=prot_F-serratus_M_contig75.18742.1|Name=mRNA_F-serratus_M_contig75.18742.1|organism=Fucus serratus male|type=polypeptide|length=131bp
MRFVKNVGLGFKTPKSAKEGTYVDKKCPFTGDVSIRGRILKGLVISAGKM
RNTIVIRRDYLHYVSKYRRFEKRHKNMTVHCSPCWQNVKEGDIVTIGQCR
PLSKTVRFNVLEHEACINTAVAVKKQFRMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000266Ribosomal_S17/S11
IPR032440Ribosomal_S11_N
IPR028333Ribosomal_S17_arc-typ
IPR019979Ribosomal_S17_CS
IPR012340NA-bd_OB-fold