prot_F-serratus_M_contig747.18708.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig747.18708.1
Unique Nameprot_F-serratus_M_contig747.18708.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length404
Homology
BLAST of mRNA_F-serratus_M_contig747.18708.1 vs. uniprot
Match: D8LTJ2_ECTSI (Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTJ2_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 5.610e-137
Identity = 201/248 (81.05%), Postives = 222/248 (89.52%), Query Frame = 0
Query:  158 GGLVSRTSSGGDSEGAS---RAGPVVLRSRMMKPRVLLKIVVLGSSNVGKTSLMKRYVASDFSDRRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKLDLAKGVSMDGVNGVDRNRVLKWCEMQGMGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLSLQPSLGGGTILDLADERARQQKGGGCC 402
            GG  S  S+G D EGA+   RAG    R R MKPRVLLKIVVLG SNVGKTSLMKRY A DF+D RRPTIGADFMTKE++ GDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALL+YD++CAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNK+DLA G++MDG++GVD+ RV+KWCEMQGMGHIETSAKDGTGV+VAMQAVA+LAL+QK KRERDL+L PSLGGGT LDLAD+RARQQ+ GGCC
Sbjct:  117 GGTASSNSNGVDFEGATARARAGGGASRQRQMKPRVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLAMDGIHGVDKTRVMKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALNPSLGGGTTLDLADQRARQQRTGGCC 364          
BLAST of mRNA_F-serratus_M_contig747.18708.1 vs. uniprot
Match: A0A7S2RVV0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVV0_9STRA)

HSP 1 Score: 229 bits (584), Expect = 2.080e-69
Identity = 115/217 (53.00%), Postives = 154/217 (70.97%), Query Frame = 0
Query:  186 MKPRVLLKIVVLGSSNVGKTSLMKRYVASDFSDRRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKLDLAKGVSMDGVNGVDRNRVLKWCEMQGMGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLSLQPSLGGGT-ILDLADERARQQKGGGC 401
            M+ RV+LKI+VLGSSNVGKTSLM+R+  + FS+ RR T GADF +K +    Q ++LQIWDTAGQERFH G+LG  F+RGA+AALL+YD + A SF+QV  WR E+L R+DV P DFP+VV+GNK+D+     MDG++GVD+  V +WC   G GHIETSAKDGTGV VAM+A+  LAL ++    + ++   SL G    ++L+    + +   GC
Sbjct:    1 MEERVVLKIIVLGSSNVGKTSLMRRFCKNSFSEARRATTGADFSSKRMSFAGQEVMLQIWDTAGQERFHHGTLGGAFYRGADAALLVYDATSASSFKQVENWRSEVLSRIDVAPGDFPLVVVGNKVDMEGNTPMDGIHGVDKAAVTEWCRAHGTGHIETSAKDGTGVQVAMEAIGTLALARRKAGVQRIARMNSLTGAKDSVNLSTSFRKGETSSGC 217          
BLAST of mRNA_F-serratus_M_contig747.18708.1 vs. uniprot
Match: F0Y7J9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7J9_AURAN)

HSP 1 Score: 191 bits (484), Expect = 2.580e-55
Identity = 99/181 (54.70%), Postives = 129/181 (71.27%), Query Frame = 0
Query:  191 LLKIVVLGSSNVGKTSLMKRYVASDFSDRRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKLDLAKGVSMDGVNGVDRNRVLKWCEMQGMGHIETSAKDGTGVDVAMQAVAMLALDQKCKRE 371
            LLK VVLGSSNVGKTSL+ ++V   F+  RR T GADF +K +  GD+ + L IWDTAGQERFH G+LG  F+RGA+AALL+YD +   +FEQ+ MWR ELL R+D  P +FP+VV+GNK+D+            ++  V++WC   G+G   TSAKDGTGV VAM+AVAMLAL+ K +R+
Sbjct:   10 LLKCVVLGSSNVGKTSLLMQFVHGKFTPARRVTTGADFASKVLHLGDREVRLVIWDTAGQERFHHGTLGGAFYRGADAALLVYDTTDIRTFEQIEMWRRELLQRIDGPPEEFPVVVVGNKVDVPNKTREH-----EQAAVVRWCRDLGIGLCLTSAKDGTGVAVAMEAVAMLALENKRRRQ 185          
BLAST of mRNA_F-serratus_M_contig747.18708.1 vs. uniprot
Match: A0A8J2S8J0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8J0_9STRA)

HSP 1 Score: 181 bits (460), Expect = 3.840e-51
Identity = 103/213 (48.36%), Postives = 135/213 (63.38%), Query Frame = 0
Query:  191 LLKIVVLGSSNVGKTSLMKRYVASDFSDRRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKLDLAKGVSMDGVNGVDRNRVLKWCEMQGMGHIETSAKDGTGVDVAMQAVAMLALDQKCKRER-DLSLQPSLGGGTILDLADERARQQKGGGCC 402
            +LK VVLGSSNVGK+SL++RY  + F   RR T+GADF +K I  G++ + L IWDTAGQERFH G++G  F+RGA+ ALL+YD +   +F QV +WR ELL R+D  P  FPIV +GNK+DL      D     D      WC   G+G +  SA DGTGV VAM+AVA LAL+ K +R+   ++  PS      L L D  AR+++G   C
Sbjct:   59 MLKCVVLGSSNVGKSSLLERYTKNSFRPERRVTLGADFASKVIEVGEERVRLVIWDTAGQERFHHGTIGGAFYRGADGALLVYDTTDFATFAQVELWRRELLQRVD-GPEAFPIVCVGNKMDLPCPTRSD-----DEKAAEAWCAAHGVGLLFASACDGTGVAVAMEAVAALALENKKRRQALGVTKPPS------LSLDDLHAREKRGSSNC 259          
BLAST of mRNA_F-serratus_M_contig747.18708.1 vs. uniprot
Match: D2VAL1_NAEGR (Rab family small GTPase n=2 Tax=Naegleria TaxID=5761 RepID=D2VAL1_NAEGR)

HSP 1 Score: 172 bits (437), Expect = 1.850e-48
Identity = 97/218 (44.50%), Postives = 139/218 (63.76%), Query Frame = 0
Query:  187 KPRVLLKIVVLGSSNVGKTSLMKRYVASDFSDRRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKLDLAKGVSMDGVNGVDRNRVLKWCEMQG-MGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLSLQPSLGGGTILDLADERARQQKGGGCC 402
            + +VLLK+++LG S VGKTSLM +YV   FS++ + TIGADF+TKE++  D+ + +QIWDTAGQERF   SLG  F+RGA++ +L++D + A +FE +  WR+E L++    DP +FP VVI NK+DL + +       V + R L WC+ +G + + E SAK+GT V+ A Q +A  AL     +E D    P  GG +I +  DE   Q K  GCC
Sbjct:    4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQ--SLGVAFYRGADSCVLVFDATVAKTFENINSWRDEFLIQAGPPDPDNFPFVVIANKIDLDQRI-------VPQKRALAWCKAKGNIPYFECSAKEGTNVEQAFQTIARNALG----KEEDT---PYTGGQSITEFPDEP--QPKKSGCC 203          
BLAST of mRNA_F-serratus_M_contig747.18708.1 vs. uniprot
Match: A0A0C2XM57_AMAMK (Uncharacterized protein n=4 Tax=Agaricales TaxID=5338 RepID=A0A0C2XM57_AMAMK)

HSP 1 Score: 171 bits (434), Expect = 5.320e-48
Identity = 87/185 (47.03%), Postives = 126/185 (68.11%), Query Frame = 0
Query:  189 RVLLKIVVLGSSNVGKTSLMKRYVASDFSDRRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKLDLAKGVSMDGVNGVDRNRVLKWCEMQG-MGHIETSAKDGTGVDVAMQAVAMLALDQKCKRE 371
            RVLLK+++LG S VGKTSLM +YV   FS++ + TIGADF+TKE+I  D+P+ +Q+WDTAGQERF   SLG  F+RGA+  +L+YD++ + SFE +  WR+E L++    DP +FP VV+GNK+D+ +         V + R + WC+ +G + + ETSAKD   V+ A Q VA  AL Q+ + +
Sbjct:    3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRPVTMQLWDTAGQERFQ--SLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGNKIDVEENKRQ-----VTQKRAMTWCQSKGNIPYFETSAKDAINVEQAFQTVAKNALQQEAEEQ 180          
BLAST of mRNA_F-serratus_M_contig747.18708.1 vs. uniprot
Match: A0A7S3H9L0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9L0_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.150e-47
Identity = 98/220 (44.55%), Postives = 139/220 (63.18%), Query Frame = 0
Query:  187 KPRVLLKIVVLGSSNVGKTSLMKRYVASDFSDRRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKLDLAKGVSMDGVNGVDRNRVLKWCEMQG---MGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLSLQPSLGGGTILDLADERARQQKGGGCC 402
            + +VLLKI++LG S VGKTSLM +YV   FS + + TIGADF+TKE++  D+ + LQIWDTAGQERF   SLG  F+RGA+A +L++DI+   SFEQ+  WREE L + +  DP +F  VVIGNK+D       +    V +++V +WC+ QG   + + ETSAKD T V+VA    A  AL Q    + D+ +  +      ++L+ + A  +  GGCC
Sbjct:    4 RKKVLLKIIILGDSGVGKTSLMNQYVNQRFSSQYKATIGADFLTKEVMIDDKLVTLQIWDTAGQERFQ--SLGVAFYRGADACILVHDITAEKSFEQLNSWREEFLAQANPRDPDNFSFVVIGNKVD------KESERRVPKSKVTQWCKSQGPKPIPYFETSAKDATKVEVAFLEAAQAALHQD-SADSDVFIPDT------INLSKQTAPAKSSGGCC 208          
BLAST of mRNA_F-serratus_M_contig747.18708.1 vs. uniprot
Match: K5XK14_AGABU (Uncharacterized protein n=5 Tax=Agaricales TaxID=5338 RepID=K5XK14_AGABU)

HSP 1 Score: 169 bits (429), Expect = 2.760e-47
Identity = 87/185 (47.03%), Postives = 126/185 (68.11%), Query Frame = 0
Query:  189 RVLLKIVVLGSSNVGKTSLMKRYVASDFSDRRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKLDLAKGVSMDGVNGVDRNRVLKWCEMQG-MGHIETSAKDGTGVDVAMQAVAMLALDQKCKRE 371
            RVLLK+++LG S VGKTSLM +YV   FS++ + TIGADF+TKE+I  D+ + +Q+WDTAGQERF   SLG  F+RGA+  +L+YD++ A SFE +  WR+E L++    DP +FP VV+GNK+D+ +G        V + R + WC+ +G + + ETSAK+   V+ A Q VA  AL Q+ + +
Sbjct:    3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRLVTMQLWDTAGQERFQ--SLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGNKIDVEEGKRQ-----VTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQ 180          
BLAST of mRNA_F-serratus_M_contig747.18708.1 vs. uniprot
Match: A0A7S3K3U1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3U1_9STRA)

HSP 1 Score: 169 bits (429), Expect = 4.750e-47
Identity = 102/219 (46.58%), Postives = 133/219 (60.73%), Query Frame = 0
Query:  191 LLKIVVLGSSNVGKTSLMKRYVASDFSDRRRPTIGADFMTKEI-IAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKLDLAKGVSMDGVNGVDRNRVLKWCEMQGMGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLSLQPSLGGGTILDLADERARQQKGG-----GCCR 403
            LLK VVLGSSNVGKTSL+ +++   F   RR T GADF ++ + I   + + L IWDTAGQERFH G+LG+ F+RGA+ ALL+YD +   SFEQ+ MWR ELL R+   P +FP+VV+GNK+D+            +   V KWC   G+G   TSAKDGTGV  AM+A+A LA + K +R +  S   SL     L L D   R  +G       CC+
Sbjct:   11 LLKCVVLGSSNVGKTSLLTQFIHGRFDSTRRATTGADFASRVLEIDQGRKIRLVIWDTAGQERFHHGTLGNAFYRGADGALLVYDTTDIRSFEQIEMWRGELLQRVQGPPDEFPVVVVGNKIDIPSET-----RDSEFAAVQKWCRDLGIGICLTSAKDGTGVLAAMEAIAHLAYEAKQRRGK--SSHSSLNDRDTLAL-DNIRRNNRGAVDSSSSCCK 221          
BLAST of mRNA_F-serratus_M_contig747.18708.1 vs. uniprot
Match: A0A2G5FAI3_AQUCA (Uncharacterized protein n=2 Tax=Ranunculaceae TaxID=3440 RepID=A0A2G5FAI3_AQUCA)

HSP 1 Score: 172 bits (435), Expect = 6.320e-47
Identity = 99/226 (43.81%), Postives = 138/226 (61.06%), Query Frame = 0
Query:  180 VLRSRMMKPRVLLKIVVLGSSNVGKTSLMKRYVASDFSDRRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKLDLAKGVSMDGVNG--VDRNRVLKWCEMQG-MGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLSLQPSLGGGTILDLADERARQQKGGGC 401
            +L +   + R+LLK+++LG S VGKTSLM +YV   FS++ + TIGADF+TKE+   D+   LQIWDTAGQERF   SLG  F+RGA+  +L+YD++ A SFE +  WREE L++    DP +FP VV+GNK+D+      DG N   V   +   WC  +G + + ETSAK+G  V+ A Q +A  AL  + + E  L           +D+AD   RQQ+  GC
Sbjct:   92 LLSTMASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQ--SLGVAFYRGADCCVLVYDVNVAKSFENLNNWREEFLIQASPSDPENFPFVVLGNKIDV------DGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEEEMYLP--------DTIDVADGGGRQQRSTGC 301          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig747.18708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTJ2_ECTSI5.610e-13781.05Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2RVV0_9STRA2.080e-6953.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0Y7J9_AURAN2.580e-5554.70Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2S8J0_9STRA3.840e-5148.36Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D2VAL1_NAEGR1.850e-4844.50Rab family small GTPase n=2 Tax=Naegleria TaxID=57... [more]
A0A0C2XM57_AMAMK5.320e-4847.03Uncharacterized protein n=4 Tax=Agaricales TaxID=5... [more]
A0A7S3H9L0_9STRA1.150e-4744.55Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
K5XK14_AGABU2.760e-4747.03Uncharacterized protein n=5 Tax=Agaricales TaxID=5... [more]
A0A7S3K3U1_9STRA4.750e-4746.58Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A2G5FAI3_AQUCA6.320e-4743.81Uncharacterized protein n=2 Tax=Ranunculaceae TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 341..363
score: 31.62
coord: 233..255
score: 45.22
coord: 215..231
score: 32.35
coord: 300..313
score: 44.64
coord: 192..213
score: 41.34
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 192..366
e-value: 1.5E-55
score: 200.5
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 189..366
e-value: 5.1E-12
score: 52.0
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 197..396
e-value: 3.1E-4
score: 11.5
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 194..366
e-value: 2.3E-9
score: 1.0
NoneNo IPR availableGENE3D3.40.50.300coord: 180..379
e-value: 1.1E-49
score: 170.4
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 189..402
NoneNo IPR availablePANTHERPTHR24073:SF1065RAS-RELATED PROTEIN RABG3Acoord: 189..402
NoneNo IPR availablePROSITEPS51419RABcoord: 187..402
score: 25.854
IPR001806Small GTPasePFAMPF00071Rascoord: 193..360
e-value: 3.4E-42
score: 143.8
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 193..358
e-value: 6.4E-21
score: 72.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 188..377

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig747contigF-serratus_M_contig747:243556..255827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig747.18708.1mRNA_F-serratus_M_contig747.18708.1Fucus serratus malemRNAF-serratus_M_contig747 243465..256027 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig747.18708.1 ID=prot_F-serratus_M_contig747.18708.1|Name=mRNA_F-serratus_M_contig747.18708.1|organism=Fucus serratus male|type=polypeptide|length=404bp
MIFDPELAAAAKRHARAQAKARQKAAEAAAAAAAAAGGASGGEPIRTTTT
APAPAGKPVPTPVTPSSATSIPSETVTDAARNTRANSRADSSATSSALPQ
AKHDAAARSVDHEVSPTEKVVVDAGRTGQSGSGNSSMGPIPGGADGSGSA
DSGSGNGGGLVSRTSSGGDSEGASRAGPVVLRSRMMKPRVLLKIVVLGSS
NVGKTSLMKRYVASDFSDRRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQ
ERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDVDPH
DFPIVVIGNKLDLAKGVSMDGVNGVDRNRVLKWCEMQGMGHIETSAKDGT
GVDVAMQAVAMLALDQKCKRERDLSLQPSLGGGTILDLADERARQQKGGG
CCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase