prot_F-serratus_M_contig747.18705.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig747.18705.1
Unique Nameprot_F-serratus_M_contig747.18705.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length372
Homology
BLAST of mRNA_F-serratus_M_contig747.18705.1 vs. uniprot
Match: A0A6H5JRQ4_9PHAE (TPR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRQ4_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 8.280e-94
Identity = 205/352 (58.24%), Postives = 238/352 (67.61%), Query Frame = 0
Query:    1 MKRLLRAVSSTLRGITPKARPSSASAPKSVHQEKVRKAMEALAPKGAMLPSENRALAMEVTAAVKGGDD----LLKKTPEEMFIVANGLFQGTYLPEDKPKAFELWKAAADAGHLKATYSYAGCLRNGEGTKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHMGVPQDEHRARELFKSAAVGGFVPAIHAAASMMEAGKGGDKEEAKAAQWLEVAIEAGDPVAASTLATWYQDGRGGLEVNHEKAYELHLSAAERGMPRAQYNTAVQLFEGKGVQQNLPEAAVWFEKXXXXXXXXXXXXXXXXXXXXXXXXRDQQRALQMYKEGLRAEGQLGGPVAKFGDTMMEKI 348
            MKR+  AVS   R + PKA     +AP + HQE VRKAME+LAP G  LPSE++ L ME+ AA   GD      L KTPE+MF+ AN   QG ++  DK  AF LWK AA+AGH KA                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E +G+PQDE RA  LFK+AA GGFVPAIHAAASMMEAGKGG+KE+AKA QWLEVA+EAGDP+A STLATWY  GR GLEV+H+KA+ELHL AA   MPRAQYNTAV   EG G++QNLPEAA WFE+                         D++RAL++Y+  LRAEGQL G +A  GD  M  +
Sbjct:    1 MKRVFGAVSGAFRSLVPKA-----TAPAAHHQESVRKAMESLAPPGRRLPSESKPLVMELVAAASEGDKEKELSLLKTPEDMFLAANAFHQGKHIRADKETAFALWKKAAEAGHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDVGIPQDEERALGLFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLEVDHKKAFELHLKAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLKGGLATAGDATMAAL 347          
BLAST of mRNA_F-serratus_M_contig747.18705.1 vs. uniprot
Match: A0A482SVR9_9ARCH (Sel1 repeat family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVR9_9ARCH)

HSP 1 Score: 104 bits (260), Expect = 1.370e-21
Identity = 66/196 (33.67%), Postives = 90/196 (45.92%), Query Frame = 0
Query:   94 DKPKAFELWKAAADAGHLKATYSYAGCLRNGEGTKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHMGVPQDEHRARELFKSAAVGGFVPAIHAAASMMEAGKGGDKEEAKAAQWLEVAIEAGDPVAASTLATWYQDGRGGLEVNHEKAYELHLSAAERGMPRAQYNTAVQLFEGKGVQQNLPEAAVWFEK 289
            D  KA ELW   A  G ++A YS A CL++G G                                       G   D  +A   ++ AA GG  PA H  A+    G+G ++ +  A  + E  +E GDP +   L TW+ +GRGGLEVN +KA++L L AA    P A +N    L  G GV ++ P+AA WFEK
Sbjct:  108 DPAKAVELWTLCASKGSVEARYSRAICLKDGVGIAEDKATAIQELQGLVDKHNYNFAHYSLAIMYDRGE---GCLVDLPKAFYHYRLAAKGGIQPAFHNLANAYAFGRGVEQSDHNARMFYEAGVEMGDPASLYVLGTWHYNGRGGLEVNKQKAFDLQLQAANAKHPAAMFNIGAALLVGDGVSEDAPKAAEWFEK 300          
BLAST of mRNA_F-serratus_M_contig747.18705.1 vs. uniprot
Match: A0A1Y1RC54_9PROT (Beta-lactamase n=1 Tax=Campylobacteraceae bacterium 4484_4 TaxID=1970775 RepID=A0A1Y1RC54_9PROT)

HSP 1 Score: 92.0 bits (227), Expect = 5.790e-18
Identity = 53/120 (44.17%), Postives = 68/120 (56.67%), Query Frame = 0
Query:  170 DEHRARELFKSAAVGGFVPAIHAAASMMEAGKGGDKEEAKAAQWLEVAIEAGDPVAASTLATWYQDGRGGLEVNHEKAYELHLSAAERGMPRAQYNTAVQLFEGKGVQQNLPEAAVWFEK 289
            D   A  ++   A  G   A  + A M + G+G +K+EA+A +  E A+E   P A   LA WY +G+GGLE N  KAYEL L AA  G+PRAQY  AV    G G  QN  EAA W+E+
Sbjct:   17 DYEEAFSVYSELAKEGDPDAQTSLAYMYQQGQGCEKDEARARELYEKAVEKKQPYALFNLAVWYANGKGGLERNPFKAYELFLEAAVAGIPRAQYEVAVMSERGNGTPQNYSEAAYWYEE 136          
BLAST of mRNA_F-serratus_M_contig747.18705.1 vs. uniprot
Match: A0A7S2MPN1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MPN1_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 4.060e-8
Identity = 57/189 (30.16%), Postives = 74/189 (39.15%), Query Frame = 0
Query:   81 VANGLFQGTYLPEDKPKAFELWKAAADAGHLKATYSYAGCLRNGEGTK----------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHMGVPQDE-----------------HRARELFKSAAVGGFVPAIHAAASMMEAGKGG-DKEEAKAAQWLEVAIEAGDPVAASTLATWYQDGRGGLE 241
            VAN L +G  + +D+ +A  LW+AAA  G + A YS+A    +G G +                                               G  QDE                   A  L+KSAA GG VPAIH   +M   G  G  ++E KA +W E   E+GDP +  TLATW   G GG E
Sbjct:   74 VANALSKGIEIEKDEVRAALLWEAAARKGDIHAAYSFAMARYSGAGVEAEPEAAAASLETLAESGHSGAQYATAGILLKRYGGWEAQAGVGGRREGENQDEGGKVVAEEAAAAVEAAHQHALSLYKSAAKGGVVPAIHNVGNMYATGLPGIPQDEGKAKKWYEAGAESGDPFSMFTLATWACAGTGGEE 262          
BLAST of mRNA_F-serratus_M_contig747.18705.1 vs. uniprot
Match: UPI001C625E30 (SEL1-like repeat protein n=1 Tax=Massilia sp. PAMC28688 TaxID=2861283 RepID=UPI001C625E30)

HSP 1 Score: 58.2 bits (139), Expect = 7.300e-7
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 0
Query:  170 DEHRARELFKSAAVGGFVPAIHAAASMMEAGKGGDKEEAKAAQWLEVAIEAGDPVAASTLATWYQDGRGGLEVNHEKAYEL 250
            D  RA  L ++AA  G  PA+   +SM+ AG+G  ++EA+A QWLE A++  +P A   LA + QDG GG   + + A +L
Sbjct:   35 DSARALVLIEAAAKAGHAPAMFILSSMLMAGEGTARDEARARQWLERAVDEDNPEAMQQLAYYLQDGLGGYARDEQHAAQL 115          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig747.18705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JRQ4_9PHAE8.280e-9458.24TPR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A482SVR9_9ARCH1.370e-2133.67Sel1 repeat family protein n=1 Tax=archaeon TaxID=... [more]
A0A1Y1RC54_9PROT5.790e-1844.17Beta-lactamase n=1 Tax=Campylobacteraceae bacteriu... [more]
A0A7S2MPN1_9STRA4.060e-830.16Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI001C625E307.300e-740.74SEL1-like repeat protein n=1 Tax=Massilia sp. PAMC... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 223..259
e-value: 0.0064
score: 25.7
coord: 147..186
e-value: 0.37
score: 19.8
coord: 260..295
e-value: 1.3E-6
score: 38.0
coord: 187..222
e-value: 0.8
score: 18.7
coord: 296..331
e-value: 3.4E-4
score: 29.9
coord: 75..110
e-value: 8.2
score: 14.4
coord: 111..146
e-value: 0.022
score: 23.9
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 260..294
e-value: 1.5E-4
score: 22.3
coord: 296..324
e-value: 1.5E-4
score: 22.3
coord: 113..145
e-value: 0.055
score: 14.2
coord: 229..258
e-value: 0.0035
score: 18.0
coord: 191..222
e-value: 0.9
score: 10.3
coord: 85..110
e-value: 0.019
score: 15.6
coord: 148..182
e-value: 0.0059
score: 17.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 69..341
e-value: 4.7E-63
score: 215.2
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 73..328
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 76..238
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 205..328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig747contigF-serratus_M_contig747:209556..220202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig747.18705.1mRNA_F-serratus_M_contig747.18705.1Fucus serratus malemRNAF-serratus_M_contig747 209461..220820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig747.18705.1 ID=prot_F-serratus_M_contig747.18705.1|Name=mRNA_F-serratus_M_contig747.18705.1|organism=Fucus serratus male|type=polypeptide|length=372bp
MKRLLRAVSSTLRGITPKARPSSASAPKSVHQEKVRKAMEALAPKGAMLP
SENRALAMEVTAAVKGGDDLLKKTPEEMFIVANGLFQGTYLPEDKPKAFE
LWKAAADAGHLKATYSYAGCLRNGEGTKRDLPKAVELFERLGEKGLLEAK
HALGLILSSGEGEHMGVPQDEHRARELFKSAAVGGFVPAIHAAASMMEAG
KGGDKEEAKAAQWLEVAIEAGDPVAASTLATWYQDGRGGLEVNHEKAYEL
HLSAAERGMPRAQYNTAVQLFEGKGVQQNLPEAAVWFEKAAAGGVPQAML
NLGKMLEQGLGIERDQQRALQMYKEGLRAEGQLGGPVAKFGDTMMEKIVL
ESRQRRTHSQEDGAANKTEQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf