prot_F-serratus_M_contig747.18702.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig747.18702.1
Unique Nameprot_F-serratus_M_contig747.18702.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length219
Homology
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BLAST of mRNA_F-serratus_M_contig747.18702.1 vs. uniprot
Match: D7FIW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIW0_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 8.410e-44
Identity = 89/193 (46.11%), Postives = 117/193 (60.62%), Query Frame = 0 
Query:   26 ASTLTTQAASCARRLNRHVPFGVDGVNRGALDVLL-RGESRARSAMINPRRREARKVCRSVRRHLGERETDAEKEAAFERELERDAAAWVNGNPDRQELWDRAQKWLKFSKLRRVREEALSELERDKLRYVLKDVQAVTGLPLVNGREITPLAWGITLCIQLMPIAALYLVFTALAADN-PHPVLEVSKPFWA 216
            AS    Q    +  +  HV       +  AL +L  RG+ R R      RR  +R         + E   D E++  FEREL+RDA  W+NG+  +QELW++A+ W   +KL   REEA+SELER+ LRY LKDVQ VTGLPLV   EITPLAW ITL IQLMP+AA+Y++  ++A +N P PVL+ + PFWA
Sbjct:   22 ASFAVQQPILASPSVQHHVTTAAGRASGSALVMLRSRGDQRRRGGSSRNRRDISRGAAAVTTLRISEE--DRERDLKFERELDRDAQRWINGDAKKQELWNKAKSWRNLNKLLLAREEAMSELERETLRYFLKDVQTVTGLPLVEENEITPLAWCITLTIQLMPLAAIYIIVFSIATENNPQPVLDAAHPFWA 212
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig747.18702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIW0_ECTSI8.410e-4446.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 197..218
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.81
NoneNo IPR availableTMHMMTMhelixcoord: 174..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig747contigF-serratus_M_contig747:141960..154830 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig747.18702.1mRNA_F-serratus_M_contig747.18702.1Fucus serratus malemRNAF-serratus_M_contig747 141390..154928 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig747.18702.1 ID=prot_F-serratus_M_contig747.18702.1|Name=mRNA_F-serratus_M_contig747.18702.1|organism=Fucus serratus male|type=polypeptide|length=219bp
MIFLMRTLVALLSISRCVCFVPPSTASTLTTQAASCARRLNRHVPFGVDG
VNRGALDVLLRGESRARSAMINPRRREARKVCRSVRRHLGERETDAEKEA
AFERELERDAAAWVNGNPDRQELWDRAQKWLKFSKLRRVREEALSELERD
KLRYVLKDVQAVTGLPLVNGREITPLAWGITLCIQLMPIAALYLVFTALA
ADNPHPVLEVSKPFWAGS*
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