prot_F-serratus_M_contig7458.18694.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig7458.18694.1
Unique Name	prot_F-serratus_M_contig7458.18694.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	128

Homology

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BLAST of mRNA_F-serratus_M_contig7458.18694.1 vs. uniprot
Match: A0A6H5JEZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEZ4_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 6.100e-9
Identity = 36/67 (53.73%), Postives = 43/67 (64.18%), Query Frame = 0

Query:   47 VLDRDDIQGGSCFAPIADDYVFFRQLQEPHMVFIQYQLAVLGSLIFMILICWRRHGSMISALYAPPA 113
            V D   +  G C A   D+ V   + Q PHM FI+ Q+AVL  L+ MIL+CWRRHG MIS LYAPPA
Sbjct:  364 VSDDQLLYDGDCAA--GDERVMSWR-QTPHMAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPA 427

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BLAST of mRNA_F-serratus_M_contig7458.18694.1 vs. uniprot
Match: D7G4J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J9_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 7.440e-9
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 0

Query:   73 QEPHMVFIQYQLAVLGSLIFMILICWRRHGSMISALYAPPA 113
            Q PHM FI+ Q+AVL  L+ MIL+CWRRHG MIS LYAPPA
Sbjct:  296 QTPHMAFIECQVAVLVVLVSMILVCWRRHGRMISVLYAPPA 336

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig7458.18694.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig7458.18694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JEZ4_9PHAE	6.100e-9	53.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G4J9_ECTSI	7.440e-9	70.73	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 79..98
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..78
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 99..127
None	No IPR available	TMHMM	TMhelix		coord: 79..98
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig7458	contig	F-serratus_M_contig7458:10230..11646 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig7458.18694.1	mRNA_F-serratus_M_contig7458.18694.1	Fucus serratus male	mRNA	F-serratus_M_contig7458 10210..11647 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig7458.18694.1 ID=prot_F-serratus_M_contig7458.18694.1|Name=mRNA_F-serratus_M_contig7458.18694.1|organism=Fucus serratus male|type=polypeptide|length=128bp
MKAADGGGGDDTAGLAAMGTAAEGAAAAAVSMVAGDVPGARDAAFSVLDR
DDIQGGSCFAPIADDYVFFRQLQEPHMVFIQYQLAVLGSLIFMILICWRR
HGSMISALYAPPAFPDARGQIAGNAPS*