prot_F-serratus_M_contig74.18646.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig74.18646.1
Unique Nameprot_F-serratus_M_contig74.18646.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length659
Homology
BLAST of mRNA_F-serratus_M_contig74.18646.1 vs. uniprot
Match: A0A6H5JK21_9PHAE (MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK21_9PHAE)

HSP 1 Score: 295 bits (755), Expect = 1.810e-86
Identity = 193/350 (55.14%), Postives = 228/350 (65.14%), Query Frame = 0
Query:    9 GSIDDTDILDALDLKRKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLK----DRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQLNMTASSA-ERRPSAGAGAVGEGEELGELDGDASRKGFSKGRSVGGGNDEGRTSSPTSVADFPSAQGXXXXXEGTRRATLGGGFDGRTRTKGGRLKRHKRGGPRGQARTPSRSITGVGGCSIESGKGSEEEPSGGQGRGRGDAKTSAELMSAQALFRGSIPGLTTFDRSDIKSFHREKEVLLSAAKAAGDIQKRVLIEETTPDVLNAKGLLMFLKTSPSARPP 353
            G ID +DIL+ALD KRKRCVRKW+ +ED EM+ +V+  G K WGLIGS+L     DRTGKQCRERWHNQLDPAIKK+PWT+ EE+TLMRAHSIHGNKWAEIAK+LPGRTDNAIKNHWNSAKRRLSRQLNM+ +S  +RR S  +    E E        A+R      R + GG     +  PT+ A    A GXXXXX G    T  GG D      GGR +   RG  R  A                             G G G A+TSA++MSAQALF  SIPGLT+FDR+++ SF +EK  LLSAA+A GD +KR ++EETTPDVLNAKGLLMFL+ SPS+  P
Sbjct:    4 GDIDHSDILNALDAKRKRCVRKWSKQEDAEMVKLVLELGVKQWGLIGSRLSSLGGDRTGKQCRERWHNQLDPAIKKDPWTKAEEDTLMRAHSIHGNKWAEIAKILPGRTDNAIKNHWNSAKRRLSRQLNMSVNSVLDRRQSVSSSGGDEDEPH-----PATRP-----RGISGG-----SRGPTAAA----AGGXXXXXVGMTVET--GGDD-----SGGRNQGRCRGYSRRDA----------------------------AGTGEG-ARTSADMMSAQALFGKSIPGLTSFDRAEMHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLRQSPSSETP 298          
BLAST of mRNA_F-serratus_M_contig74.18646.1 vs. uniprot
Match: A0A835YSF8_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSF8_9STRA)

HSP 1 Score: 189 bits (481), Expect = 8.100e-53
Identity = 88/111 (79.28%), Postives = 97/111 (87.39%), Query Frame = 0
Query:   25 KRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQLNMT 135
            KR VRKW+PEEDQ M  +V  HGT+ WGLIGS L  RTGKQCRERWHNQLDP IKK+ WTR EEE LM+AHS+HGN+WAEIAK+LPGRTDNAIKNHWNSAKRRLSRQLNM+
Sbjct:   28 KRVVRKWSPEEDQLMALLVKEHGTRQWGLIGSLLSGRTGKQCRERWHNQLDPHIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLSRQLNMS 138          
BLAST of mRNA_F-serratus_M_contig74.18646.1 vs. uniprot
Match: A0A835YW24_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW24_9STRA)

HSP 1 Score: 181 bits (458), Expect = 9.250e-51
Identity = 83/105 (79.05%), Postives = 92/105 (87.62%), Query Frame = 0
Query:   25 KRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLS 129
            KR VRKW+PEEDQ M+ +V  HGT+ WGLIGS L  RTGKQCRERWHNQLDP IKK+ WTR EEE LM+AHS+HGN+WAEIAK+LPGRTDNAIKNHWNSAKRRLS
Sbjct:    3 KRSVRKWSPEEDQLMMLLVREHGTRQWGLIGSLLSGRTGKQCRERWHNQLDPMIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLS 107          
BLAST of mRNA_F-serratus_M_contig74.18646.1 vs. uniprot
Match: A0A7S2CJK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJK5_9STRA)

HSP 1 Score: 181 bits (459), Expect = 2.140e-48
Identity = 82/110 (74.55%), Postives = 96/110 (87.27%), Query Frame = 0
Query:   23 KRKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQL 132
            K +R VRKWTPEED  M+ +V  HGTK WG IGS L+ RTGKQCRERWHNQLDPAI+K+PWT  EEE L++AHS++GN+WAEIAK+LPGRTDNA+KNHWNSAKRRLSRQ+
Sbjct:   43 KPRRVVRKWTPEEDSLMMTLVQEHGTKHWGRIGSSLQGRTGKQCRERWHNQLDPAIRKDPWTGGEEEILLKAHSLYGNRWAEIAKLLPGRTDNAVKNHWNSAKRRLSRQV 152          
BLAST of mRNA_F-serratus_M_contig74.18646.1 vs. uniprot
Match: A0A7S0SQE8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQE8_9STRA)

HSP 1 Score: 171 bits (432), Expect = 3.150e-44
Identity = 81/112 (72.32%), Postives = 89/112 (79.46%), Query Frame = 0
Query:   24 RKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQLNMT 135
            +KR VRKWT EED  M+ +V  HGT+ WGLIG+KL  RTGKQCRERWHNQLDPAI K PWT HEE  L+ AH+  GN+WAEIAK LPGRTDNAIKNHWNSAKRRL RQ   T
Sbjct:   14 QKRTVRKWTQEEDNLMMALVSEHGTRHWGLIGAKLNGRTGKQCRERWHNQLDPAINKTPWTEHEESLLLAAHNDLGNRWAEIAKRLPGRTDNAIKNHWNSAKRRLLRQTITT 125          
BLAST of mRNA_F-serratus_M_contig74.18646.1 vs. uniprot
Match: A0A6G0XQ76_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQ76_9STRA)

HSP 1 Score: 161 bits (407), Expect = 9.920e-42
Identity = 73/108 (67.59%), Postives = 87/108 (80.56%), Query Frame = 0
Query:   25 KRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQL 132
            ++CV+KWTPEED  M+++V  HGT+ W LIGS L+ R GKQCRERWHNQLDP I+K+PWT  EE  L  AH+ +GNKWAEIAK+LPGRTDNAIKNHWNS KRR  R +
Sbjct:   13 RKCVQKWTPEEDALMLELVQTHGTRRWSLIGSMLQGRNGKQCRERWHNQLDPNIRKDPWTPEEEMLLKVAHNKYGNKWAEIAKLLPGRTDNAIKNHWNSYKRRGHRAM 120          
BLAST of mRNA_F-serratus_M_contig74.18646.1 vs. uniprot
Match: A0A8K1FIZ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIZ4_PYTOL)

HSP 1 Score: 163 bits (413), Expect = 1.810e-41
Identity = 79/136 (58.09%), Postives = 100/136 (73.53%), Query Frame = 0
Query:    4 MSRRQGSIDDTD-ILDALDLKRKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQLNMTASS 138
            M+ R+  +DD D    +   K ++ V KWT +EDQ MI +V ++GT+ W +IG+KL  R GKQCRERWHNQLDPAI+K+PWT  EE  L  +H ++GNKWAEIAKMLPGRTDNAIKNHWNS+KRRL R  +  + S
Sbjct:    7 MAERRRLLDDEDHYRGSKKRKERKPVCKWTEKEDQMMIKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKDPWTDEEERILRESHELYGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKRSSSTVSGS 142          
BLAST of mRNA_F-serratus_M_contig74.18646.1 vs. uniprot
Match: A0A7R9U0E6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0E6_9STRA)

HSP 1 Score: 170 bits (431), Expect = 2.950e-41
Identity = 77/112 (68.75%), Postives = 95/112 (84.82%), Query Frame = 0
Query:   23 KRKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQLNM 134
            ++KR VRKWTPEED+ M+D+V   GTK WGLIG +L+ RTGKQCRERWHNQLDP+I+K+PW++ EE  L+  H   GN+WAEIAK+LPGRTDNAIKNHWNSAKRRL+RQ++ 
Sbjct:   18 RKKRQVRKWTPEEDKLMMDLVNTFGTKRWGLIGGRLQGRTGKQCRERWHNQLDPSIRKDPWSKQEEAILIVVHQQVGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLTRQMDQ 129          
BLAST of mRNA_F-serratus_M_contig74.18646.1 vs. uniprot
Match: A0A485LUK2_9STRA (Aste57867_25154 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LUK2_9STRA)

HSP 1 Score: 156 bits (395), Expect = 5.670e-40
Identity = 78/127 (61.42%), Postives = 89/127 (70.08%), Query Frame = 0
Query:   13 DTDILDALDLKRKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQLNMTASSA 139
            D D  D    +RK  + KWT  ED +M+++V  HGT+ W LIGS L  R GKQCRERWHNQLDPAI+K+PWT  EE  L  AH   GNKWAEIAK+LPGRTDNAIKNHWNS KRR  R L   A +A
Sbjct:    6 DKDSADEASCERK-SINKWTAAEDAKMVELVQAHGTRRWSLIGSLLPGRNGKQCRERWHNQLDPAIRKDPWTADEETMLKIAHHKFGNKWAEIAKLLPGRTDNAIKNHWNSYKRRGHRALQHKAKAA 131          
BLAST of mRNA_F-serratus_M_contig74.18646.1 vs. uniprot
Match: D0MS64_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MS64_PHYIT)

HSP 1 Score: 158 bits (400), Expect = 7.140e-40
Identity = 77/126 (61.11%), Postives = 92/126 (73.02%), Query Frame = 0
Query:   17 LDALDLKRKRCVRKWTPEEDQEMIDMVMRHGTKMWGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGNKWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQLNMTASSAERR 142
            LD    K ++ V KWT +ED  M+ +V ++GT+ W +IG+KL  R GKQCRERWHNQLDPAI+KEPWT  EE  L   H   GNKWAEIAKMLPGRTDNAIKNHWNS+KRRL R    T++S  +R
Sbjct:   21 LDPPTRKERKPVCKWTEKEDLLMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPEEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKRGFTPTSTSQRKR 146          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig74.18646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK21_9PHAE1.810e-8655.14MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A835YSF8_9STRA8.100e-5379.28Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
A0A835YW24_9STRA9.250e-5179.05Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A7S2CJK5_9STRA2.140e-4874.55Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S0SQE8_9STRA3.150e-4472.32Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A6G0XQ76_9STRA9.920e-4267.59Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8K1FIZ4_PYTOL1.810e-4158.09Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7R9U0E6_9STRA2.950e-4168.75Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A485LUK2_9STRA5.670e-4061.42Aste57867_25154 protein n=1 Tax=Aphanomyces stella... [more]
D0MS64_PHYIT7.140e-4061.11Myb-like DNA-binding protein, putative n=2 Tax=Phy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 79..127
e-value: 2.9E-16
score: 70.0
coord: 27..76
e-value: 6.3E-11
score: 52.3
NoneNo IPR availableGENE3D1.10.10.60coord: 81..145
e-value: 1.6E-18
score: 68.5
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 31..91
e-value: 4.4E-15
score: 55.7
NoneNo IPR availableGENE3D1.10.10.60coord: 28..80
e-value: 3.5E-20
score: 73.6
NoneNo IPR availablePANTHERPTHR45614:SF1MYB PROTEINcoord: 25..254
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 25..254
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 24..74
score: 14.284
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 75..129
score: 25.635
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 27..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig74contigF-serratus_M_contig74:445424..460463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig74.18646.1mRNA_F-serratus_M_contig74.18646.1Fucus serratus malemRNAF-serratus_M_contig74 445341..460465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig74.18646.1 ID=prot_F-serratus_M_contig74.18646.1|Name=mRNA_F-serratus_M_contig74.18646.1|organism=Fucus serratus male|type=polypeptide|length=659bp
MSKMSRRQGSIDDTDILDALDLKRKRCVRKWTPEEDQEMIDMVMRHGTKM
WGLIGSKLKDRTGKQCRERWHNQLDPAIKKEPWTRHEEETLMRAHSIHGN
KWAEIAKMLPGRTDNAIKNHWNSAKRRLSRQLNMTASSAERRPSAGAGAV
GEGEELGELDGDASRKGFSKGRSVGGGNDEGRTSSPTSVADFPSAQGGGG
GGEGTRRATLGGGFDGRTRTKGGRLKRHKRGGPRGQARTPSRSITGVGGC
SIESGKGSEEEPSGGQGRGRGDAKTSAELMSAQALFRGSIPGLTTFDRSD
IKSFHREKEVLLSAAKAAGDIQKRVLIEETTPDVLNAKGLLMFLKTSPSA
RPPPAIEADVDAYADRSSSAGSSSGEDEDAPREDEGCGKSLSVTEQVEDE
KARDGDAASSRVDGTFKQAVPRGNATGASKVLYRTPLDPTGGQSTGAAQA
LPVRLTRRIAGQAPCGADASGSPPPPEITSRCASVLGDARPEKSDRSPAR
STARTRYPVTVSIALPATPWGLVASLDSRVPALTPKLFGTDPATPAAMSP
SMPPCDEALCIREPRVISALMDPSTPSVGRHEGVTGSQEEAAEQAVAAAA
ATMAGMASVGGGRPKKRRDFGSVMAECKGEKWGSGRGGMESNNQRPYCFP
WGEDVARA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR009057Homeobox-like_sf