prot_F-serratus_M_contig737.18623.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig737.18623.1
Unique Nameprot_F-serratus_M_contig737.18623.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length197
Homology
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: D8LIY1_ECTSI (ClpS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIY1_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 5.710e-77
Identity = 130/193 (67.36%), Postives = 151/193 (78.24%), Query Frame = 0
Query:    6 FLRSLIFWLCLCAGRGFVMLPTARLPGRGLPTSRSCAPRNKLRSVSTDVSPPRITAASRWVRMSTA-DQEESTGG-TGTGVQTIVKKRVEVLTVPEEKEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESGDGGE 196
            FL+++  WLCLCAGR FV LPTA   G         A R++       ++  R++  SRW+ MS+A DQ+ STGG TGTGVQTIVK++V+ +   + KE+L KEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHK+GKATVTQAWKSK+E YCLQLQQCGLTASIAPDSKFEGG  G GG+
Sbjct:    7 FLKAVALWLCLCAGRAFVALPTAAPRGVARRAVTGDAARSQQPVGCCGLTQQRVSQRSRWLSMSSATDQDVSTGGGTGTGVQTIVKEKVKEMVEVDNKEELDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKSGKATVTQAWKSKSESYCLQLQQCGLTASIAPDSKFEGGGEGAGGK 199          
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A835ZHY3_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY3_9STRA)

HSP 1 Score: 159 bits (401), Expect = 8.830e-47
Identity = 79/93 (84.95%), Postives = 86/93 (92.47%), Query Frame = 0
Query:  101 KEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKF-EGGESG 192
            KE+L KE+WWRVILHND+IHTFDYVT SITKVVKKLTMK AYE+TMETHKAGKATVTQAWKS+AE YCL LQQCGLTASIAPDSKF +GG+ G
Sbjct:   23 KEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKFGKGGDEG 115          
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A835ZBL6_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL6_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.460e-44
Identity = 81/110 (73.64%), Postives = 89/110 (80.91%), Query Frame = 0
Query:   74 EESTGGTGTGVQTIVKKRVE--VLTVPEEKEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIA 181
            E  TG   TG   +VK RV+  V    + KE+L KE+WWRVILHND+IHTFDYVT SITKVVKKLTMK AYE+TMETHKAGKATVTQAWKS+AE YCL LQQCGLTASIA
Sbjct:   41 EVQTGSPSTGTSVLVKDRVKEKVEDQVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIA 150          
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A7S2W133_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W133_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.300e-33
Identity = 62/116 (53.45%), Postives = 79/116 (68.10%), Query Frame = 0
Query:   81 GTGVQTIVKKRVEVLTVPEEKEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESGDGGE 196
            G GV TI   R +  T  EEK  L KE WWRV+LHNDEIHTF+YVT+++ KVV ++T +KA+++T  TH +G +T+T  WKS AE  C+ LQ  GLT SIAPD  FE    G GG+
Sbjct:    7 GRGVTTITIDRTDTDTKVEEKMDLDKEGWWRVLLHNDEIHTFEYVTEALVKVVPQITKRKAFQITRRTHMSGVSTITTVWKSLAEQMCMGLQTFGLTVSIAPDEDFEDNREGGGGQ 122          
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A813J9Y2_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J9Y2_POLGL)

HSP 1 Score: 127 bits (318), Expect = 6.170e-33
Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 0
Query:  101 KEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESG 192
            KE+  KE+WWRV+LHND+IHTF+YVT  +TKVV+ LT +KAY +T E H +GKATV   WK+ AE +C++LQQ GLT SIAPDSKFEG + G
Sbjct:  139 KEEFEKEKWWRVLLHNDDIHTFEYVTNCLTKVVQHLTRRKAYNITWEAHSSGKATVACVWKALAEQFCVKLQQDGLTVSIAPDSKFEGNKGG 230          
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A7S1RIS0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RIS0_ALECA)

HSP 1 Score: 125 bits (314), Expect = 1.020e-32
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 0
Query:  101 KEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESG 192
            KE+  KE+WWRV+LHND+IHTF+YVT  +T++V  LT +KAY +T E H +GKATV   WKS +E YC+ LQQ GLT SIAPDSKFEG + G
Sbjct:  105 KEQFDKEKWWRVLLHNDDIHTFEYVTGCLTRIVPHLTRRKAYNITWEAHSSGKATVACVWKSLSEQYCVNLQQLGLTVSIAPDSKFEGNKGG 196          
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A7S3U5D7_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U5D7_9SPIT)

HSP 1 Score: 122 bits (307), Expect = 1.310e-32
Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 0
Query:  101 KEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESG 192
            KE+ AKE+WWRV+LHND+IHTF+YVT  +TK V+ LT +KAY +T E H +GKATV   WK+ AE + ++LQQ GLT SIAPDSKFEG + G
Sbjct:   29 KEQFAKEKWWRVLLHNDDIHTFEYVTGCLTKTVQHLTRRKAYNITWEAHSSGKATVACVWKNLAEQFSVKLQQDGLTVSIAPDSKFEGNKGG 120          
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A7S2GQ17_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQ17_9STRA)

HSP 1 Score: 122 bits (305), Expect = 3.410e-32
Identity = 64/106 (60.38%), Postives = 76/106 (71.70%), Query Frame = 0
Query:   81 GTGVQTIVKKRVEVLTVPEEKEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKF 186
            G GVQTI   +V+     +EKE L +E WWRV+LHNDEIHTF+YVT++I K+  +LT KKAY +T  TH AG ATVT  WKS AE  CL LQ  GLT SIAPD+KF
Sbjct:   17 GAGVQTITIDKVD--NEVQEKEDLNEEGWWRVLLHNDEIHTFEYVTEAIVKICPQLTRKKAYMITRTTHGAGVATVTTVWKSLAEQMCLGLQTFGLTVSIAPDAKF 120          
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A812W203_9DINO (CPLS1 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812W203_9DINO)

HSP 1 Score: 122 bits (307), Expect = 4.710e-32
Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 0
Query:  101 KEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESG 192
            KE+  KE+WWRV+LHND+IHTF+YVT  + KVV+ L+ +KAY +T E H +GKATV   WK+ AE +C++LQQ GLT SIAPDSKFEG + G
Sbjct:   74 KEQFEKEKWWRVLLHNDDIHTFEYVTNCLVKVVQHLSRRKAYGITWEAHSSGKATVACVWKALAEQFCVKLQQDGLTVSIAPDSKFEGNKGG 165          
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A1Z5JEC0_FISSO (ClpS domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEC0_FISSO)

HSP 1 Score: 122 bits (306), Expect = 6.480e-32
Identity = 69/147 (46.94%), Postives = 97/147 (65.99%), Query Frame = 0
Query:   48 RSVSTDVSPPRITAASRWVRMSTADQEESTGGTGTGVQTIVKKRVEVLTVPEEKEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESGDG 194
            RS ST  SP R++  S ++   ++ ++ ST   G  VQ I K      T  + +E+  KE+ WRV+LHNDE+HTF+YV +S+TKV+  L  K A+E+ ++TH  GKAT+T+ WK +AE +CL LQ+ GLT SI+PD  FEGG SG G
Sbjct:   27 RSSSTLTSPQRLSDTSIYM---SSVEKSSTTKKGKSVQVIDK------TETKAEEQKKKEEMWRVVLHNDEVHTFNYVVRSLTKVIGTLDRKAAFEICVQTHGIGKATITKTWKKQAEQFCLGLQRQGLTVSISPDEDFEGGHSGGG 164          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIY1_ECTSI5.710e-7767.36ClpS domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZHY3_9STRA8.830e-4784.95Ribosomal protein L7/L12, C-terminal/adaptor prote... [more]
A0A835ZBL6_9STRA2.460e-4473.64Ribosomal protein L7/L12, C-terminal/adaptor prote... [more]
A0A7S2W133_9STRA2.300e-3353.45Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A813J9Y2_POLGL6.170e-3363.04Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A7S1RIS0_ALECA1.020e-3261.96Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A7S3U5D7_9SPIT1.310e-3261.96Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A7S2GQ17_9STRA3.410e-3260.38Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A812W203_9DINO4.710e-3260.87CPLS1 protein n=2 Tax=Symbiodinium TaxID=2949 RepI... [more]
A0A1Z5JEC0_FISSO6.480e-3246.94ClpS domain-containing protein n=1 Tax=Fistulifera... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 107..173
e-value: 4.3E-17
score: 61.7
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 85..180
e-value: 6.4E-13
score: 50.1
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 103..182
NoneNo IPR availablePANTHERPTHR33473:SF1ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTICcoord: 89..185
NoneNo IPR availablePANTHERPTHR33473FAMILY NOT NAMEDcoord: 89..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig737contigF-serratus_M_contig737:379360..382065 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig737.18623.1mRNA_F-serratus_M_contig737.18623.1Fucus serratus malemRNAF-serratus_M_contig737 379360..382065 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig737.18623.1 ID=prot_F-serratus_M_contig737.18623.1|Name=mRNA_F-serratus_M_contig737.18623.1|organism=Fucus serratus male|type=polypeptide|length=197bp
MAIMTFLRSLIFWLCLCAGRGFVMLPTARLPGRGLPTSRSCAPRNKLRSV
STDVSPPRITAASRWVRMSTADQEESTGGTGTGVQTIVKKRVEVLTVPEE
KEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHK
AGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESGDGGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like