prot_F-serratus_M_contig736.18590.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig736.18590.1
Unique Nameprot_F-serratus_M_contig736.18590.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length109
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig736.18590.1 vs. uniprot
Match: A0A6H5KVG3_9PHAE (HECT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVG3_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 7.130e-17
Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 0 
Query:   15 SLFSQDDSSSDSQGTSTTCGNMTACSTCVEFFSVEEKSSCIWCSKPK-------GGGPDALCLPRTRAQDNCAIEDLRTSCQEGVGWYVLILTLAALV 105
            S F  DD SS   G ST C     C +CV++F  +    C+WC+ PK       GGG   LC+PR  AQD+C   +L+ +CQEG GWYVL+LTL+AL+
Sbjct:    3 SYFDFDDDSSQQSGNST-CSKFATCESCVDYFG-QGDVGCLWCNVPKDESRSVVGGG---LCVPRFGAQDSCEFGELQATCQEGAGWYVLVLTLSALL 95
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig736.18590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KVG3_9PHAE7.130e-1745.92HECT domain-containing protein n=2 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig736contigF-serratus_M_contig736:71361..85619 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig736.18590.1mRNA_F-serratus_M_contig736.18590.1Fucus serratus malemRNAF-serratus_M_contig736 71361..85646 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig736.18590.1 ID=prot_F-serratus_M_contig736.18590.1|Name=mRNA_F-serratus_M_contig736.18590.1|organism=Fucus serratus male|type=polypeptide|length=109bp
MAEMESHALTEVYYSLFSQDDSSSDSQGTSTTCGNMTACSTCVEFFSVEE
KSSCIWCSKPKGGGPDALCLPRTRAQDNCAIEDLRTSCQEGVGWYVLILT
LAALVCCCC
back to top