prot_F-serratus_M_contig7337.18556.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig7337.18556.1
Unique Nameprot_F-serratus_M_contig7337.18556.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length127
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig7337.18556.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 3.030e-66
Identity = 108/126 (85.71%), Postives = 114/126 (90.48%), Query Frame = 0 
Query:    1 MTGKGKGXXXXXDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVASK 126
            M+GKGKG       KK+TTRS+KAGLQFPVGR+GRFLK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRH+QLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK   K
Sbjct:    1 MSGKGKGGRG----KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_F-serratus_M_contig7337.18556.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 1.020e-64
Identity = 107/122 (87.70%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    1 MTGKGKGXXXXXDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 122
            M+GKGKG       KK+TTRS+KAGLQFPVGR+GRFLK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRH+QLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   46 MSGKGKGGRG----KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 163
[Close]
BLAST of mRNA_F-serratus_M_contig7337.18556.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 2.560e-63
Identity = 105/122 (86.07%), Postives = 112/122 (91.80%), Query Frame = 0 
Query:    1 MTGKGKGXXXXXDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 122
            M+GKGKG       KK+T++SSKAGLQFPV RIGR+LK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRH+QLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG----KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_F-serratus_M_contig7337.18556.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.220e-62
Identity = 101/125 (80.80%), Postives = 113/125 (90.40%), Query Frame = 0 
Query:    1 MTGKGKGXXXXXDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVAS 125
            M GKGKG     + KK+T++SSKAGLQFPV R+GRFLK G+Y++RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRH+QLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK AS
Sbjct:    1 MAGKGKGGRGA-EAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKTAS 124
[Close]
BLAST of mRNA_F-serratus_M_contig7337.18556.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 1.290e-62
Identity = 105/122 (86.07%), Postives = 112/122 (91.80%), Query Frame = 0 
Query:    1 MTGKGKGXXXXXDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 122
            M+GKGKG       KK+T++SSKAGLQFPV RIGR+LK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRH+QLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   52 MSGKGKGGRG----KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169
[Close]
BLAST of mRNA_F-serratus_M_contig7337.18556.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 2.520e-62
Identity = 101/122 (82.79%), Postives = 110/122 (90.16%), Query Frame = 0 
Query:    1 MTGKGKGXXXXXDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 122
            M+GKGKG       KK T+RS+KAGLQFPVGRIGRF+K GKYS RVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARI+PRH+QLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG----KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_F-serratus_M_contig7337.18556.1 vs. uniprot
Match: A0A2G5ERW1_AQUCA (Histone H2A n=6 Tax=Mesangiospermae TaxID=1437183 RepID=A0A2G5ERW1_AQUCA)

HSP 1 Score: 194 bits (493), Expect = 1.040e-61
Identity = 98/126 (77.78%), Postives = 111/126 (88.10%), Query Frame = 0 
Query:    1 MTGKGKGXXXXXDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVASK 126
            M G+GK        KK+T+RSSKAGLQFPVGRI RFLKAGKY++RVGAGAPVYLAAVLEYL AEVLELAGNAARDNKK R++PRH+QLAVRNDEEL+KLLG VTIA+GGV+PNIH++LLPKK  SK
Sbjct:    1 MAGRGKALGSSGASKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRVVPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIHSLLLPKKAGSK 126
[Close]
BLAST of mRNA_F-serratus_M_contig7337.18556.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 193 bits (490), Expect = 2.880e-61
Identity = 99/126 (78.57%), Postives = 113/126 (89.68%), Query Frame = 0 
Query:    1 MTGKGKGXXXXXDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVASK 126
            M GKGKG     DKK   ++S+KAGLQFPVGR+GRFLK G+Y++RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RIIPRH+QLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK  SK
Sbjct:    1 MGGKGKGKGGRGDKK-AVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSK 125
[Close]
BLAST of mRNA_F-serratus_M_contig7337.18556.1 vs. uniprot
Match: O22430_PINTA (Histone H2A n=12 Tax=cellular organisms TaxID=131567 RepID=O22430_PINTA)

HSP 1 Score: 192 bits (489), Expect = 3.960e-61
Identity = 98/125 (78.40%), Postives = 109/125 (87.20%), Query Frame = 0 
Query:    1 MTGKGKGXXXXXDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVAS 125
            M G+GK        KK+T+RSSKAGLQFPVGRI RFLKAGKY++RVG GAPVYLAAVLEYL AEVLELAGNAARDNKK RI+PRH+QLAVRNDEEL+KLLG VTIA+GGV+PNIH +LLPKK AS
Sbjct:    1 MAGRGKAVGGAGGSKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGGGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGAVTIANGGVMPNIHNILLPKKTAS 125
[Close]
BLAST of mRNA_F-serratus_M_contig7337.18556.1 vs. uniprot
Match: A0A7S3YXQ1_9EUKA (Histone H2A n=6 Tax=Lotharella TaxID=74819 RepID=A0A7S3YXQ1_9EUKA)

HSP 1 Score: 193 bits (490), Expect = 4.110e-61
Identity = 101/122 (82.79%), Postives = 112/122 (91.80%), Query Frame = 0 
Query:    1 MTGKGKGXXXXXDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 122
            M+GKGKG  XXX   K+TTRS++AGLQFPVGRI RFL+ G+YS RVG GAPVYLAAVLEYLTAE+LELAGNAARDNK+ RIIPRHVQLA+RNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK
Sbjct:   11 MSGKGKGGRXXXKSVKSTTRSARAGLQFPVGRISRFLRKGRYSTRVGGGAPVYLAAVLEYLTAEILELAGNAARDNKRTRIIPRHVQLAIRNDEELNKLLGDVTIAAGGVLPNIHAVLLPKK 132
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7337.18556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI3.030e-6685.71Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI1.020e-6487.70Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE2.560e-6386.07Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CG77_9STRA1.220e-6280.80Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
D7FVQ5_ECTSI1.290e-6286.07Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI2.520e-6282.79Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A2G5ERW1_AQUCA1.040e-6177.78Histone H2A n=6 Tax=Mesangiospermae TaxID=1437183 ... [more]
A0A835ZLE9_9STRA2.880e-6178.57Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
O22430_PINTA3.960e-6178.40Histone H2A n=12 Tax=cellular organisms TaxID=1315... [more]
A0A7S3YXQ1_9EUKA4.110e-6182.79Histone H2A n=6 Tax=Lotharella TaxID=74819 RepID=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 45..60
score: 90.36
coord: 60..73
score: 90.54
coord: 102..120
score: 76.04
coord: 74..88
score: 76.51
coord: 16..38
score: 68.78
IPR002119Histone H2ASMARTSM00414h2a4coord: 5..125
e-value: 8.2E-80
score: 281.1
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..126
e-value: 2.4E-61
score: 207.3
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 7..124
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 14..91
e-value: 7.5E-15
score: 55.4
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 94..125
e-value: 8.9E-19
score: 66.9
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 1..124
NoneNo IPR availablePANTHERPTHR23430:SF233HISTONE H2A.6-RELATEDcoord: 1..124
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 24..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7337contigF-serratus_M_contig7337:2862..3242 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7337.18556.1mRNA_F-serratus_M_contig7337.18556.1Fucus serratus malemRNAF-serratus_M_contig7337 2862..3242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig7337.18556.1 ID=prot_F-serratus_M_contig7337.18556.1|Name=mRNA_F-serratus_M_contig7337.18556.1|organism=Fucus serratus male|type=polypeptide|length=127bp
MTGKGKGGGGRGDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGA
PVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLL
GEVTIASGGVLPNIHAVLLPKKVASK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR032458Histone_H2A_CS