prot_F-serratus_M_contig73.18521.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig73.18521.1
Unique Nameprot_F-serratus_M_contig73.18521.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length667
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig73.18521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 439..472
e-value: 34.0
score: 10.3
coord: 523..556
e-value: 3.1
score: 16.8
coord: 481..514
e-value: 92.0
score: 6.5
coord: 565..598
e-value: 0.0059
score: 25.8
coord: 355..388
e-value: 8.6
score: 15.3
coord: 271..304
e-value: 88.0
score: 6.7
coord: 397..430
e-value: 0.0044
score: 26.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 481..514
score: 5.487
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 565..598
score: 7.67
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 355..388
score: 5.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 397..430
score: 8.909
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 262..346
e-value: 1.3E-5
score: 26.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 507..648
e-value: 4.5E-34
score: 119.8
coord: 347..506
e-value: 5.8E-53
score: 181.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 349..468
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 270..386
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 433..555
NoneNo IPR availablePFAMPF13374TPR_10coord: 523..562
e-value: 1.8E-5
score: 24.4
NoneNo IPR availablePFAMPF13424TPR_12coord: 442..508
e-value: 5.7E-14
score: 52.2
coord: 355..428
e-value: 7.8E-20
score: 71.0
coord: 564..622
e-value: 3.5E-9
score: 36.8
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 470..643
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 432..555
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 432..555
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 190..477
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 470..643
coord: 190..477
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 313..598
score: 14.179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig73contigF-serratus_M_contig73:418154..428623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig73.18521.1mRNA_F-serratus_M_contig73.18521.1Fucus serratus malemRNAF-serratus_M_contig73 408664..429406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig73.18521.1 ID=prot_F-serratus_M_contig73.18521.1|Name=mRNA_F-serratus_M_contig73.18521.1|organism=Fucus serratus male|type=polypeptide|length=667bp
MDGIASKSARDDPVVGESHEVADPEVPPDEIGVSDSSLEGTKEPSQQQPV
STVAAAPEDAAEDLPADADDEAVEEDYEDGTPLLSLQGATNGSIATAFSD
PSLLNIPGGAGGSPGVDPHAPTEQKIDRSKAGPLRRADSARPPGAAVASR
APVWGSLNNVDVSSGPQGPAAVGASRRNTDPLERADSMRPPGAARGPEAP
PLSSPRSDFFRHSPMVAEGSTSTFSNMSFGGLGRISEYSMGTNREQGEPG
SSFVQPVEICGALRREQTSDVFDLHRRAQEFEQQGRYSEAEPLYEEAGVM
WQRSHGLRDPVVGNILSKRVVLMTKQGKLEEAQDLSDRALKIVGDALGER
HKNYATVLNGHAGLLRAQGKYEEAESLCRRVLEIWEESLGPEHPNVAAAS
NNLAELLRVQGSYDAADPLYRRALEIDENQYGPDSPEVAADLNNFAELLR
AQDNIVEAEAMYARVMEVWERTLGPEHPNVATILGNQAELLADQGNYGEA
EWRNARALEIDEKVFGSDHPAVATGLNNRAWLLECRGERAEAEALYERSQ
DIRERTLGALHPAVADSLNNRAMLLAEQERFEEAEPLFSRAITIYESVFG
KQHAIAEAARENLATTSARQKRKQIMPFRRRLNRAEKQLSRNDSNFSRGS
YGTFSRLSTRSFGSSF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom