prot_F-serratus_M_contig7294.18513.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig7294.18513.1
Unique Nameprot_F-serratus_M_contig7294.18513.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length72
Homology
BLAST of mRNA_F-serratus_M_contig7294.18513.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR)

HSP 1 Score: 78.2 bits (191), Expect = 3.230e-15
Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    1 MLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIR 72
            +L  V+  +YD+V RP+D+ V+G K +++ K G DG+IEKYK R+VA+GF QVEGV YT+ ++P    ASIR
Sbjct:  305 LLTFVKAELYDEVERPRDRKVVGCKWVFRIKRGPDGEIEKYKARVVAKGFTQVEGVDYTDTFAPVTKFASIR 376          
BLAST of mRNA_F-serratus_M_contig7294.18513.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 77.8 bits (190), Expect = 4.460e-15
Identity = 34/64 (53.12%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    9 VYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIR 72
            V+++V RP+D+ +IG+K ++K K G DG++EKYK RLVAQGF QVEG+ Y E ++P   + SIR
Sbjct: 1026 VFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIR 1089          
BLAST of mRNA_F-serratus_M_contig7294.18513.1 vs. uniprot
Match: A0A2R6NNP3_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NNP3_9APHY)

HSP 1 Score: 75.5 bits (184), Expect = 2.770e-14
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 0
Query:    1 MLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIR 72
            ML  V+  ++D+V  PK++ V+G+K +++ K G +GKIEKYK RLVAQGF QV+G+ YTE ++P     SIR
Sbjct:   17 MLAFVKANLFDEVECPKNRKVVGSKWVFRIKRGPNGKIEKYKARLVAQGFTQVKGIDYTETFAPVAKFISIR 88          
BLAST of mRNA_F-serratus_M_contig7294.18513.1 vs. uniprot
Match: A0A060SUY4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SUY4_PYCCI)

HSP 1 Score: 74.3 bits (181), Expect = 7.370e-14
Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 0
Query:   10 YDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIR 72
            YD+V RP+++ V+G K +++ K G DG +E+YK RLVAQGF QVEG+ Y+E ++P    ASIR
Sbjct:  962 YDEVERPQNRKVVGCKWVFRLKRGADGSVERYKARLVAQGFTQVEGIDYSEMFAPVSKFASIR 1024          
BLAST of mRNA_F-serratus_M_contig7294.18513.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 74.3 bits (181), Expect = 7.390e-14
Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    1 MLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIR 72
            +L   +  +YD+V RP+++ V+  K +++ K G DGKI+KYK RLVA+GF QVEGV YT+ ++P    ASIR
Sbjct:  987 LLSFAKAELYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIR 1058          
BLAST of mRNA_F-serratus_M_contig7294.18513.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 74.3 bits (181), Expect = 7.390e-14
Identity = 34/64 (53.12%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    9 VYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIR 72
            +YD+V +P+ + V+G K ++K K G DG IEKYK RLVA+GF QVEG+ YT+ ++P    ASIR
Sbjct: 1020 LYDEVEKPRGRKVVGCKWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIR 1083          
BLAST of mRNA_F-serratus_M_contig7294.18513.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY)

HSP 1 Score: 73.6 bits (179), Expect = 1.370e-13
Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    9 VYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIR 72
            +YD+V RP+D+ V+  K ++K K G DG+I+KYK RLVA+GF QVEG+ +TE ++P    AS+R
Sbjct:  655 LYDEVERPRDRKVVDCKWVFKIKRGPDGEIKKYKARLVAKGFTQVEGIDFTETFAPVAKFASVR 718          
BLAST of mRNA_F-serratus_M_contig7294.18513.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 73.6 bits (179), Expect = 1.380e-13
Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    1 MLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIR 72
            +L   +  +YD+V RP+++ V+G K ++K K G DG+IEKYK RLVA+GF QVE V Y E ++PT   ++IR
Sbjct:  972 LLSFTKAELYDEVERPRNRKVVGCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEDVDYDETFAPTTKFSTIR 1043          
BLAST of mRNA_F-serratus_M_contig7294.18513.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A)

HSP 1 Score: 68.2 bits (165), Expect = 9.170e-13
Identity = 31/66 (46.97%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    7 NCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIR 72
            N  +D V RP+ + V+  K ++KRK+ +DG++E+YK RLVA+G+ QVEG+ Y E +SP     SIR
Sbjct:   60 NETWDIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSPVIKTKSIR 125          
BLAST of mRNA_F-serratus_M_contig7294.18513.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 70.9 bits (172), Expect = 1.230e-12
Identity = 33/64 (51.56%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    9 VYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIR 72
            +YD+V RP+++ VI  K ++K K G DG+IEKYK RLVA+GF QVEG+ + E ++P    AS+R
Sbjct:  957 LYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVR 1020          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7294.18513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1C7MSU6_GRIFR3.230e-1551.39Retrovirus-related Pol polyprotein from transposon... [more]
A0A0C2WN23_AMAMK4.460e-1553.13Integrase catalytic domain-containing protein (Fra... [more]
A0A2R6NNP3_9APHY2.770e-1450.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060SUY4_PYCCI7.370e-1452.38Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]
A0A060SSE0_PYCCI7.390e-1448.61Integrase catalytic domain-containing protein n=1 ... [more]
A0A1M2VV58_TRAPU7.390e-1453.13Retrovirus-related Pol polyprotein from transposon... [more]
A0A8H7NTQ9_9APHY1.370e-1351.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y9XTU1_9APHY1.380e-1348.61Integrase catalytic domain-containing protein n=1 ... [more]
UPI0015A81C6A9.170e-1346.97uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A401G4V0_9APHY1.230e-1251.56Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..72
e-value: 3.1E-12
score: 46.6
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 13..65
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 13..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7294contigF-serratus_M_contig7294:8004..8219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7294.18513.1mRNA_F-serratus_M_contig7294.18513.1Fucus serratus malemRNAF-serratus_M_contig7294 8004..8228 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig7294.18513.1 ID=prot_F-serratus_M_contig7294.18513.1|Name=mRNA_F-serratus_M_contig7294.18513.1|organism=Fucus serratus male|type=polypeptide|length=72bp
MLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGF
WQVEGVHYTEKYSPTPSAASIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like