prot_F-serratus_M_contig723.18476.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig723.18476.1
Unique Nameprot_F-serratus_M_contig723.18476.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length243
Homology
BLAST of mRNA_F-serratus_M_contig723.18476.1 vs. uniprot
Match: D8LH18_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH18_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 9.380e-66
Identity = 121/223 (54.26%), Postives = 148/223 (66.37%), Query Frame = 0
Query:   22 LKCL--STSIPSASAFLGTPTATTTTKPITHLHTLAQSSRRRGCFPQRTPPGRGAVHSRRGK-GEDGFDLARAKLREAVDTREAPAAEVSAALALLAEGRGPTTTIGAEDIEGRWELVFSTQLERGYMPIRELVGFYPSRQEATIDASAGPLPIGGMRGQCWWKGGPENELDFNTGRIKLGPLSINKGGDQVKTYKFFLQQGEILAAKSSAGGFALLSRVVED 241
            L CL  S S+     F+GT  +  T  P      L   S  RG      P  R  +++  G  G++  + A A LR AV+TR+ P  EVS AL +LA   G     GAED+EG WELVFSTQL+ GYMPIRELVGFYPSR+EA+IDA+AGPLPIGGMRG+CWW+GG ENEL F  G +KLGP    K  ++VKTYKFF+  G++LAA+SSAGGFALLSRV E+
Sbjct:   10 LWCLVVSASMSYVGGFVGTSPSALTPAPH-RTRALESMSEHRGV-----PKRRRLLYAEGGXXGQESVEPA-AVLRTAVETRKVPMTEVSEALRVLAADGGSPLACGAEDVEGSWELVFSTQLKSGYMPIRELVGFYPSREEASIDATAGPLPIGGMRGKCWWRGGEENELAFMLGAVKLGPFKFGKDKNEVKTYKFFVNDGKVLAARSSAGGFALLSRVPEE 225          
BLAST of mRNA_F-serratus_M_contig723.18476.1 vs. uniprot
Match: A0A836CJ46_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ46_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.710e-24
Identity = 61/156 (39.10%), Postives = 93/156 (59.62%), Query Frame = 0
Query:   91 AKLREAVDTREAPAAEVSAALALLAEGRGPTTTIGAEDIEG-RWELVFSTQLERGYMPIRELVGFYPSRQEATIDASAGP-LPIGGMRGQCWWK---GGPENELDFNTGRIKLGPLSINKGGDQV---KTYKFFLQQGEILAAKSSAGGFALLSRV 238
            A + E+VDTR+ PA  V  AL  L +       +  +D++G  WELVFS+QL +GYMP+RE++ F  S  + ++  + GP +P+GG++G C W+   G     + FN  ++ LGP++  K G +    KTY FF     +LAA+SS GG A+L +V
Sbjct:   50 ALVLESVDTRQIPAENVVQALESLEQ---KAQAVRQQDVDGLNWELVFSSQLSKGYMPVREVICFDISNGKISLSTTFGPGIPLGGIQGTCSWQEPEGSQPGVVSFNLSKVLLGPIAFEKPGAKEAPPKTYSFFFSGDGVLAARSSNGGVAVLKKV 202          
BLAST of mRNA_F-serratus_M_contig723.18476.1 vs. uniprot
Match: A0A7J7PWF0_9CHLO (Uncharacterized protein n=2 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PWF0_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 1.480e-6
Identity = 50/163 (30.67%), Postives = 72/163 (44.17%), Query Frame = 0
Query:   84 DGFDLARAKLREAVDTREAPAAEVSAALALLAEGRGPTTTIGAEDIEGRWELVFSTQLERGYM---PIRELVGFYPSRQEATIDASAGPLPIGGMRGQCWWKGGPENELDFNTGRIKLGPLSINKGGDQV------KTYKFFLQQGEILAAKSSAGGFALLSR 237
            DG     A L++A   +      V  ALA L +         A DI+G W LVFST     +M   P++E        ++  +++  GP     +RGQ     G    +DF    + +  L + K   QV      KTY F+ +   I AA+SSAGG ALL +
Sbjct:   52 DGLQPCLALLKKAATDKSVQPQLVEGALAYLEQSHPKP----AADIDGSWRLVFSTATSSRFMQYIPVQEDFVIQLGAKQCALESVVGPFSFN-IRGQITGWDGTTGAMDFQFTAVDV--LLLGKQIWQVTPKTKPKTYTFYFEDQGIAAARSSAGGLALLRK 207          
BLAST of mRNA_F-serratus_M_contig723.18476.1 vs. uniprot
Match: A0A383WD24_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WD24_TETOB)

HSP 1 Score: 55.8 bits (133), Expect = 6.980e-6
Identity = 50/163 (30.67%), Postives = 71/163 (43.56%), Query Frame = 0
Query:   84 DGFDLARAKLREAVDTREAPAAEVSAALALLAEGRGPTTTIGAEDIEGRWELVFSTQLERG---YMPIRELVGFYPSRQEATIDASAGPLPIGGMRGQCWWKGGPENELDFNTGRIKLGPLSINKGGDQV------KTYKFFLQQGEILAAKSSAGGFALLSR 237
            DG +   A L+ A   +      V  ALA L +         A DI+G W LVFST        Y+P+RE        ++  +++  GP     +RGQ          +DF    + +  L + K   QV      KTY F+ +   I AA+SSAGG ALL +
Sbjct:   51 DGLEPCLALLKRAAADKSVQPQLVEGALAYLEQSHPKP----AADIDGTWRLVFSTATSNRFLQYIPVREDFVIQLGPKQCALESVVGPFAFN-IRGQITDFNSATGAMDFQFTAVDI--LLLGKQIWQVTPKTKPKTYTFYYEGQGIAAARSSAGGLALLRK 206          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig723.18476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LH18_ECTSI9.380e-6654.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJ46_9STRA1.710e-2439.10Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7J7PWF0_9CHLO1.480e-630.67Uncharacterized protein n=2 Tax=Scenedesmus sp. NR... [more]
A0A383WD24_TETOB6.980e-630.67Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..242
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..34
score: 0.684

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig723contigF-serratus_M_contig723:103481..109607 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig723.18476.1mRNA_F-serratus_M_contig723.18476.1Fucus serratus malemRNAF-serratus_M_contig723 103461..109682 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig723.18476.1 ID=prot_F-serratus_M_contig723.18476.1|Name=mRNA_F-serratus_M_contig723.18476.1|organism=Fucus serratus male|type=polypeptide|length=243bp
MSRQQPMMPHALRRSVFVFILLKCLSTSIPSASAFLGTPTATTTTKPITH
LHTLAQSSRRRGCFPQRTPPGRGAVHSRRGKGEDGFDLARAKLREAVDTR
EAPAAEVSAALALLAEGRGPTTTIGAEDIEGRWELVFSTQLERGYMPIRE
LVGFYPSRQEATIDASAGPLPIGGMRGQCWWKGGPENELDFNTGRIKLGP
LSINKGGDQVKTYKFFLQQGEILAAKSSAGGFALLSRVVEDK*
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