prot_F-serratus_M_contig721.18459.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig721.18459.1
Unique Name	prot_F-serratus_M_contig721.18459.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	57

Homology

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BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A2Z4ELL3_9NEOP (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Colpocephalum sp. Cwsp.Coatr.2.1.2013.10 TaxID=2212739 RepID=A0A2Z4ELL3_9NEOP)

HSP 1 Score: 76.3 bits (186), Expect = 1.920e-16
Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0

Query:    1 MLSIGILGIIVGAHHMFTVGLDIDTRSYSTAATMITAIPTGFIIFFCWIATY 52
            MLSIG+LG IV AHHMFTVG+D+DTR+Y TAATMI AIPTG  +F  W++TY
Sbjct:   37 MLSIGVLGFIVWAHHMFTVGMDVDTRAYFTAATMIIAIPTGIKVF-SWLSTY 87

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BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: O03686_9CHLO (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Actinastrum hantzschii TaxID=55402 RepID=O03686_9CHLO)

HSP 1 Score: 75.9 bits (185), Expect = 2.400e-16
Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 0

Query:    1 MLSIGILGIIVGAHHMFTVGLDIDTRSYSTAATMITAIPTGFIIFFCWIAT 51
            MLSIGILG IV AHHM+TVGLDIDTR+Y TAATMI A+PTG  IF  WIAT
Sbjct:   32 MLSIGILGFIVWAHHMYTVGLDIDTRAYFTAATMIIAVPTGIKIF-SWIAT 81

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BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A060D879_NEOPR (Cytochrome c oxidase subunit 1 n=1 Tax=Neoporphyra perforata TaxID=182771 RepID=A0A060D879_NEOPR)

HSP 1 Score: 75.9 bits (185), Expect = 3.000e-16
Identity = 40/54 (74.07%), Postives = 44/54 (81.48%), Query Frame = 0

Query:    1 MLSIGILGIIVGAHHMFTVGLDIDTRSYSTAATMITAIPTGFIIFFCWIATYVE 54
            MLSIGILG IV AHHM+TVGLD+DTR+Y TAATMI A+PTG  IF  WIAT  E
Sbjct:    5 MLSIGILGFIVWAHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIF-SWIATMWE 57

[Close]

BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A6C0N4Z2_9PLAT (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Neodalyellida sp. AN-2020 TaxID=2706944 RepID=A0A6C0N4Z2_9PLAT)

HSP 1 Score: 74.3 bits (181), Expect = 3.040e-16
Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 0

Query:    1 MLSIGILGIIVGAHHMFTVGLDIDTRSYSTAATMITAIPTGFIIFFCWIAT 51
            M+SIGILG IV AHHMFTVGLD+DTR+Y TAATMI AIPTG  +F  W+AT
Sbjct:   13 MVSIGILGFIVWAHHMFTVGLDVDTRAYFTAATMIIAIPTGVKVF-SWLAT 62

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BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A060IEN7_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Halopteris filicina TaxID=117521 RepID=A0A060IEN7_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 3.230e-16
Identity = 41/51 (80.39%), Postives = 43/51 (84.31%), Query Frame = 0

Query:    1 MLSIGILGIIVGAHHMFTVGLDIDTRSYSTAATMITAIPTGFIIFFCWIAT 51
            MLSIGILG IV AHHMFTVGLDIDTR+Y TAATMI A+PTG  IF  WIAT
Sbjct:   39 MLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIF-SWIAT 88

[Close]

BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: A0A0N7EZ71_9NEOP (Cytochrome c oxidase subunit 1 (Fragment) n=11 Tax=Fregatiella aurifasciata TaxID=1723754 RepID=A0A0N7EZ71_9NEOP)

HSP 1 Score: 74.7 bits (182), Expect = 3.900e-16
Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0

Query:    1 MLSIGILGIIVGAHHMFTVGLDIDTRSYSTAATMITAIPTGFIIFFCWIATY 52
            M+SIGILG IV AHHMFTVG+D+DTR+Y T+ATMI AIPTG  +F  WI+TY
Sbjct:   23 MVSIGILGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVF-SWISTY 73

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BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: D6MQM8_9PHAE (Cytochrome c oxidase subunit 1 (Fragment) n=28 Tax=Phaeophyceae TaxID=2870 RepID=D6MQM8_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 4.440e-16
Identity = 41/51 (80.39%), Postives = 43/51 (84.31%), Query Frame = 0

Query:    1 MLSIGILGIIVGAHHMFTVGLDIDTRSYSTAATMITAIPTGFIIFFCWIAT 51
            MLSIGILG IV AHHMFTVGLDIDTR+Y TAATMI A+PTG  IF  WIAT
Sbjct:   39 MLSIGILGFIVWAHHMFTVGLDIDTRAYFTAATMIIAVPTGIKIF-SWIAT 88

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BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: U5JD42_BOMTE (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Bombus terrestris TaxID=30195 RepID=U5JD42_BOMTE)

HSP 1 Score: 75.5 bits (184), Expect = 5.040e-16
Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 0

Query:    1 MLSIGILGIIVGAHHMFTVGLDIDTRSYSTAATMITAIPTGFIIFFCWIATY 52
            ML IGILG IV AHHMFTVGLD+DTR+Y T+ATMI A+PTG  +F  W+ATY
Sbjct:    6 MLGIGILGFIVWAHHMFTVGLDVDTRAYFTSATMIIAVPTGIKVF-SWLATY 56

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BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: Q951X0_9HYME (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Exallonyx obsoletus TaxID=161195 RepID=Q951X0_9HYME)

HSP 1 Score: 75.5 bits (184), Expect = 5.280e-16
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 0

Query:    1 MLSIGILGIIVGAHHMFTVGLDIDTRSYSTAATMITAIPTGFIIFFCWIAT 51
            M+SIG+LG IV AHHMFT+G+DIDTR+Y T+ATMI AIPTGF IF  W+AT
Sbjct:   34 MISIGVLGFIVWAHHMFTIGMDIDTRAYFTSATMIIAIPTGFKIF-SWLAT 83

[Close]

BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Match: Q8HGF4_9NEOP (Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Amyrsidea spicula TaxID=160078 RepID=Q8HGF4_9NEOP)

HSP 1 Score: 75.1 bits (183), Expect = 5.330e-16
Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0

Query:    1 MLSIGILGIIVGAHHMFTVGLDIDTRSYSTAATMITAIPTGFIIFFCWIATY 52
            MLSIG+LG IV AHHMFTVG+D+DTR+Y T+ATMI A+PTG  IF  WIAT+
Sbjct:   36 MLSIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIF-SWIATF 86

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig721.18459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2Z4ELL3_9NEOP	1.920e-16	71.15	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]
O03686_9CHLO	2.400e-16	78.43	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]
A0A060D879_NEOPR	3.000e-16	74.07	Cytochrome c oxidase subunit 1 n=1 Tax=Neoporphyra...	[more]
A0A6C0N4Z2_9PLAT	3.040e-16	74.51	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]
A0A060IEN7_9PHAE	3.230e-16	80.39	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]
A0A0N7EZ71_9NEOP	3.900e-16	71.15	Cytochrome c oxidase subunit 1 (Fragment) n=11 Tax...	[more]
D6MQM8_9PHAE	4.440e-16	80.39	Cytochrome c oxidase subunit 1 (Fragment) n=28 Tax...	[more]
U5JD42_BOMTE	5.040e-16	71.15	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]
Q951X0_9HYME	5.280e-16	72.55	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]
Q8HGF4_9NEOP	5.330e-16	71.15	Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000883	Cytochrome c oxidase subunit I	PRINTS	PR01165	CYCOXIDASEI	coord: 29..50 score: 47.08 coord: 5..20 score: 73.29
IPR000883	Cytochrome c oxidase subunit I	PFAM	PF00115	COX1	coord: 1..52 e-value: 1.5E-10 score: 40.5
IPR000883	Cytochrome c oxidase subunit I	PANTHER	PTHR10422	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..53
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	GENE3D	1.20.210.10		coord: 1..55 e-value: 1.5E-16 score: 61.8
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	SUPERFAMILY	81442	Cytochrome c oxidase subunit I-like	coord: 1..53
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..13
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..21
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 31..53
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..30
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 54..56
None	No IPR available	TMHMM	TMhelix		coord: 2..21
None	No IPR available	TMHMM	TMhelix		coord: 31..53
IPR023616	Cytochrome c oxidase-like, subunit I domain	PROSITE	PS50855	COX1	coord: 1..45 score: 10.871

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig721	contig	F-serratus_M_contig721:287536..287706 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig721.18459.1	mRNA_F-serratus_M_contig721.18459.1	Fucus serratus male	mRNA	F-serratus_M_contig721 284784..287890 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig721.18459.1 ID=prot_F-serratus_M_contig721.18459.1|Name=mRNA_F-serratus_M_contig721.18459.1|organism=Fucus serratus male|type=polypeptide|length=57bp
MLSIGILGIIVGAHHMFTVGLDIDTRSYSTAATMITAIPTGFIIFFCWIA
TYVEKF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000883	Cyt_C_Oxase_1
IPR036927	Cyt_c_oxase-like_su1_sf
IPR023616	Cyt_c_oxase-like_su1_dom