prot_F-serratus_M_contig72.18427.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig72.18427.1
Unique Nameprot_F-serratus_M_contig72.18427.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length326
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig72.18427.1 vs. uniprot
Match: D7FUR1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR1_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 4.900e-10
Identity = 59/151 (39.07%), Postives = 70/151 (46.36%), Query Frame = 0 
Query:  222 PPXXPLPAPLFQSRANDLDPSNPFATIRMLLKVIEFLQLERAQ----------------CSDHHHQGGL---DDLLSTQTRHFD----------PADDSER------------------AGSKSREDIRRLRLENRNMHFLLVENRELKRQ 325
            PP  PLP P     AN LDPS+P+ATIR LLK++E LQLE A+                C D   + G     D  +T T H            P +   R                   G+  RE++RRLRLENRNMH LLVENRELK Q
Sbjct:  424 PPTLPLPPPPLPP-ANGLDPSDPYATIRKLLKLVEILQLELARDDNNTEDRRYQEGAFLCGDLRKRSGRYADGDTTTTTTDHAKGENAFFSDKRPGNPRTRDSTVICDGXXXXXXGFPYLGATGREELRRLRLENRNMHLLLVENRELKTQ 573
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig72.18427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUR1_ECTSI4.900e-1039.07Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 305..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig72contigF-serratus_M_contig72:871188..872955 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig72.18427.1mRNA_F-serratus_M_contig72.18427.1Fucus serratus malemRNAF-serratus_M_contig72 871186..872955 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig72.18427.1 ID=prot_F-serratus_M_contig72.18427.1|Name=mRNA_F-serratus_M_contig72.18427.1|organism=Fucus serratus male|type=polypeptide|length=326bp
AFTREVGEKKEGREKEQAVQRISSIEAISPREILTVSAPVVVPFAPNADV
EIFSRKLVDEVDGSGDARRRGQEDGFVVLASPGVGAPRVNEGSDAGDTKD
GGCASVAGETSQRAQRGIEWTDSSSCQGTTEADEPSCGFVSTKDDFPVTA
EAGSFSAAESGGKGENYGAPIPSGDKLAREAETSSADSAGGEDRERGEAE
LRHSGRREMDTLRVGRSSPQQPPPPPLPAPLFQSRANDLDPSNPFATIRM
LLKVIEFLQLERAQCSDHHHQGGLDDLLSTQTRHFDPADDSERAGSKSRE
DIRRLRLENRNMHFLLVENRELKRQA
back to top