prot_F-serratus_M_contig712.18334.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig712.18334.1
Unique Nameprot_F-serratus_M_contig712.18334.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length586
Homology
BLAST of mRNA_F-serratus_M_contig712.18334.1 vs. uniprot
Match: A0A6H5JVR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVR9_9PHAE)

HSP 1 Score: 421 bits (1081), Expect = 1.240e-136
Identity = 267/588 (45.41%), Postives = 343/588 (58.33%), Query Frame = 0
Query:    5 KHPRGFISAYTESETMQALEDDTLLAVATFVDKRDLCTLGCVCRQFAPLPSFDFLWERHALAIVRSPQQLHAVTSALNLSSNRQLVEVFQRIGIPRGVLGLWRADGPTRSWSVHSSAPGPSLPHQDLAPAEVTQAQGELLRLSLVAGGFLCESVAPNGTSHCVFAIRASTTSKGNIKLGFFKLEDDSFATMGGHH--WTPGQSILEAFLERASAIPSAKERTPIRPAGETAFLLDRGDGQTRRYTMIEAPSISPQPALLHTEQGLRVRIAKARSLCGLWCAPYGSHGFEIIHISLDP---PSHDADVPGL----VERMESISEQKSVH--DRSSAVSTCSSGQITPGG-SCYTSAPATESSESGFGGSYSSMESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLESDEDEEDVILRPVLDTRPSDGHDNKANLDTPLLYGVKVTGDINVPAGKASFVVDLEKEFDPNEELQADTRPVIIFLPTGAVMANLANRRGQIAFWCKGRGRINRIPGRWLPEWVDVDLIGYQPGSRYGFSVIFRQPAHVLRIIMDFERVFDSSEEWPRWPVA 580
            + P+    A  + +T + L+DDT+  VA+F    DLC L  VCR+F+PLP  D LWE  AL I+ S  Q+H+  S L L+S RQLVE F  IGIP GVLG W+A+ PT +W V     G      D    +  +A+GELLR++L AGGFLCES+AP+GT   +F IR S T  G IK+GFF LE +S  T+GG +  W PG S+ EA      AIP +  RTPIR +G  AF L+R DG+T RY  + AP  S                   ++LCGLWCAPYGSHG EII +S DP   P+ +     +    V ++ S+S+  +     R  +VS  S+ ++T G  S  TS PAT++  S         E+D       XXXXXXXXXXXXXXXXXX                      R+  S       +      T  S      A++ + L +G KVTGD NVPAGK SFV+DL  +FD +EEL++D+RPV+ FLPTGAVMANLANRR QI+ W KGRG+INR+PGRW PEWVDV+ + Y+ GSR  FSVIFRQP   +R++MDFER     EEWP+W  A
Sbjct:   43 ERPQQMPRAAADDKT-RLLDDDTINVVASFASCHDLCVLAEVCRRFSPLPFCDDLWELRALDILPSVPQVHSAMSQLKLTSFRQLVEAFTLIGIPGGVLGFWQAEAPTLAWDVQQQQQG----GLDGTTVQQPEARGELLRITLEAGGFLCESIAPSGTRRRIFTIRVSKTPTGRIKIGFFCLEKESALTIGGDNDSWVPGDSMAEALARYTFAIPGSTRRTPIRASGTKAFFLERNDGRTCRYVKLTAPPASSPGG---------AAAGAVKNLCGLWCAPYGSHGLEIIQLSTDPSCSPNEETAAAAVKAATVVKLSSLSQSWAGGRGGRRGSVSGSSTSRVTDGSESVCTSTPATDADGS---------EADSCDEAGGXXXXXXXXXXXXXXXXXXSSDGHGDIESVLDDGCLASIARRKGNS-------LHHADTATAGSGAGAGDASVPSQL-FGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELRSDSRPVVTFLPTGAVMANLANRRQQISCWRKGRGQINRVPGRWSPEWVDVEFVEYRAGSRCAFSVIFRQPNQAVRVVMDFERALGCEEEWPQWSAA 599          
BLAST of mRNA_F-serratus_M_contig712.18334.1 vs. uniprot
Match: D7FWS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS5_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 4.890e-115
Identity = 233/528 (44.13%), Postives = 292/528 (55.30%), Query Frame = 0
Query:   81 LNLSSNRQLVEVFQRIGIPRGVLGLWRADGPTRSWSVHSSAPGPSLPHQDLAPAEVTQAQGELLRLSLVAGGFLCESVAPNGTSHCVFAIRASTTSKGNIKLGFFKLEDDSFATMGGHH--WTPGQSILEAFLERASAIPSAKERTPIRPAGETAFLLDRGDGQTRRYTMIEAPSISPQPALLHTEQGLRVRIAKARSLCGLWCAPYGSHGFEIIHISLDPP-SHDADVPGL----------VERMESISEQKSVHDRSS---AVSTCSSGQITPGG-SCYTSAPATESSESGFGGSYSSMESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLESDEDEEDVILRPVL----------DTRPSDGHDNKANLDTPL-LYGVKVTGDINVPAGKASFVVDLEKEFDPNEELQADTRPVIIFLPTGAVMANLANRRGQIAFWCKGRGRINRIPGRWLPEWVDVDLIGYQPGSRYGFSVIFRQPAHVLRIIMDFERVFDSSEEWPRWPVA 580
            L L+S RQLVE F  IGIP GVLG W+A+ PT SW V     G      D A  +  +A+GELLR++L AGGFLCES+APNGT   +F IR S T    I +GFF LE +S  T+GG    W PG S+ EA      A+P + +RTP+R +G  AF L+R DG+T RY  + AP  S          G+       ++LCGLWCAPYGSHG EII +S DP  S D +              V ++ S+S Q     R     +VS CS+ ++T G  S  TS PAT++  S  G    +  S  XXXXXXXXXXXXX                                          +DV L  +           DT  +       +   P  L+G KVTGD NVPAGK SFV+DL  +FD +EEL++D+RPV+ FLPTGAVMANLANRR QI+ W  GRG+INR+PGRW PEWVDV+ + Y+ GSR  FSVIFRQP   +R++MDFER     EEWP+W  A
Sbjct:    4 LKLTSFRQLVEAFTLIGIPGGVLGFWQAEAPTLSWDVQQQQQG----GLDGATVQEREARGELLRITLEAGGFLCESIAPNGTRRRIFTIRVSKTPTDRINIGFFCLEKESSLTIGGDDDSWVPGDSMAEALARYTFAVPGSTKRTPMRASGTKAFFLERNDGRTCRYVKLTAPPAS--------SPGVVAAAGAVKNLCGLWCAPYGSHGLEIIQLSTDPSCSPDEETAAAXXXXXXKAATVAKLSSLS-QSWAGGRGGPRGSVSGCSTSRMTDGSESVCTSTPATDADGSEAGSCDEAGGSSEXXXXXXXXXXXXXSSDGDGDGDVESVL----------------------------DDVCLASIARRKGNSLHHADTGTAGSGAGAGDASVPSQLFGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELRSDSRPVVTFLPTGAVMANLANRRQQISCWRNGRGQINRVPGRWSPEWVDVEFVEYRAGSRCAFSVIFRQPNQAVRVVMDFERALGCEEEWPQWSAA 490          
BLAST of mRNA_F-serratus_M_contig712.18334.1 vs. uniprot
Match: A0A835ZDD8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDD8_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.640e-27
Identity = 56/133 (42.11%), Postives = 82/133 (61.65%), Query Frame = 0
Query:  441 DNKANLDTPLLYGVKVTGDINVPAGKASFVVDLEKEFDPNEELQA-DTRPVIIFLPTGAVMANLANRRGQIAFWCKGRGRINRIPGRWLPEWVDVDLIGYQPGS------RYGFSVIFRQPAHVLRIIMDFER 566
            D  A     L  G K+ GD +VPAG+ SF+VDL +++D + E+ A  T  V++F P GA + +L  R   +A WCKGRG++N    RW P WVDVD + Y+ G+       Y +S+I+R+P H +RI++DF R
Sbjct:    1 DGAAPAQQLLFRGTKIVGDPHVPAGRCSFLVDLARDYDVDAEIAAASTGLVVVFGPNGAQVLDLGLRAPAVARWCKGRGQVNMRSDRWAPTWVDVDCLLYRTGAGAGGAAEYAYSIIWREPTHGIRILVDFRR 133          
BLAST of mRNA_F-serratus_M_contig712.18334.1 vs. uniprot
Match: A0A835ZDM1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDM1_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.330e-14
Identity = 49/127 (38.58%), Postives = 70/127 (55.12%), Query Frame = 0
Query:  450 LLYGVKVTGDINVPAGKA-------SFVVDLEKEFDPNEELQADTRPVIIFLPTGAVMANLANRRGQIAFWCKGRGRIN--RIPGRWLPEWVDVDLIGYQPGSRYGFSVIFRQPAHVLRIIMDFERV 567
            L+ G KV G  N  +G         SF VDL + +D   E+ A +  V+ F+  GA + +L  R   IA WCKG+G +N     G      VDVD + Y P + +GFS+I+R+P H +RII+DF R+
Sbjct:  255 LMRGAKVVGSSNTNSGSTGSADRHWSFAVDLARGYDVAAEMAATSGLVVAFVAGGAHVIDLHARAPSIARWCKGQGHVNGGAAAGAARGAVVDVDCLVYGPRAAHGFSIIWREPKHGVRIIVDFARL 381          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig712.18334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JVR9_9PHAE1.240e-13645.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWS5_ECTSI4.890e-11544.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZDD8_9STRA2.640e-2742.11Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZDM1_9STRA1.330e-1438.58Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021894Domain of unknown function DUF3506PFAMPF12014DUF3506coord: 438..475
e-value: 6.9E-5
score: 22.9
NoneNo IPR availableGENE3D1.20.1280.50coord: 8..111
e-value: 4.8E-5
score: 25.2
NoneNo IPR availablePANTHERPTHR10706F-BOX FAMILY PROTEINcoord: 271..477
IPR026941F-box only protein 31PANTHERPTHR10706:SF130F-BOX ONLY PROTEIN 31coord: 271..477
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 7..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig712contigF-serratus_M_contig712:255468..257474 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig712.18334.1mRNA_F-serratus_M_contig712.18334.1Fucus serratus malemRNAF-serratus_M_contig712 254712..257702 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig712.18334.1 ID=prot_F-serratus_M_contig712.18334.1|Name=mRNA_F-serratus_M_contig712.18334.1|organism=Fucus serratus male|type=polypeptide|length=586bp
MSGSKHPRGFISAYTESETMQALEDDTLLAVATFVDKRDLCTLGCVCRQF
APLPSFDFLWERHALAIVRSPQQLHAVTSALNLSSNRQLVEVFQRIGIPR
GVLGLWRADGPTRSWSVHSSAPGPSLPHQDLAPAEVTQAQGELLRLSLVA
GGFLCESVAPNGTSHCVFAIRASTTSKGNIKLGFFKLEDDSFATMGGHHW
TPGQSILEAFLERASAIPSAKERTPIRPAGETAFLLDRGDGQTRRYTMIE
APSISPQPALLHTEQGLRVRIAKARSLCGLWCAPYGSHGFEIIHISLDPP
SHDADVPGLVERMESISEQKSVHDRSSAVSTCSSGQITPGGSCYTSAPAT
ESSESGFGGSYSSMESDDSGGEEERKRGGPVPVMQRRHAATSSRNFDGRG
GKRRSSGSSSDDFGRRLESDEDEEDVILRPVLDTRPSDGHDNKANLDTPL
LYGVKVTGDINVPAGKASFVVDLEKEFDPNEELQADTRPVIIFLPTGAVM
ANLANRRGQIAFWCKGRGRINRIPGRWLPEWVDVDLIGYQPGSRYGFSVI
FRQPAHVLRIIMDFERVFDSSEEWPRWPVATQESA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021894DUF3506
IPR026941FBXO31
IPR036047F-box-like_dom_sf