prot_F-serratus_M_contig71.18310.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig71.18310.1
Unique Nameprot_F-serratus_M_contig71.18310.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length154
Homology
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BLAST of mRNA_F-serratus_M_contig71.18310.1 vs. uniprot
Match: D7FYS1_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS1_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 1.350e-38
Identity = 69/88 (78.41%), Postives = 76/88 (86.36%), Query Frame = 0 
Query:   45 MVLKHAQVVGEKKVKRGAYLASLAEGPSVAQDLGLTPKDRLISVEGLDVKTLQFDRIVALIRKASFPLTLVWSRQRKDGVPENLPGTA 132
            MVLKHAQV GE+++KRGAYLA LAEGPS+AQDLGL+PKDRLI VEGLDVKTL FDRIV LIRKA+FPLTLVWSRQRK G+     G A
Sbjct:    1 MVLKHAQVFGEERLKRGAYLAGLAEGPSLAQDLGLSPKDRLILVEGLDVKTLPFDRIVGLIRKATFPLTLVWSRQRKAGIAATSKGRA 88
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BLAST of mRNA_F-serratus_M_contig71.18310.1 vs. uniprot
Match: A0A6H5KV99_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV99_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 4.390e-37
Identity = 66/77 (85.71%), Postives = 71/77 (92.21%), Query Frame = 0 
Query:   25 QQWDLFEVVLSKPSGRQKLGMVLKHAQVVGEKKVKRGAYLASLAEGPSVAQDLGLTPKDRLISVEGLDVKTLQFDRI 101
            QQWD FEVVLSKPSG QKLGMVLKHAQV GE+++KRGAYLA LAEGPS+AQDLGL+PKDRLI VEGLDVKTL FDRI
Sbjct:   22 QQWDRFEVVLSKPSGSQKLGMVLKHAQVCGEERLKRGAYLAGLAEGPSLAQDLGLSPKDRLILVEGLDVKTLPFDRI 98
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig71.18310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYS1_ECTSI1.350e-3878.41PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KV99_9PHAE4.390e-3785.71PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 41..120
e-value: 0.0049
score: 26.1
IPR001478PDZ domainPFAMPF00595PDZcoord: 32..115
e-value: 2.4E-8
score: 34.2
IPR001478PDZ domainPROSITEPS50106PDZcoord: 31..120
score: 12.828
NoneNo IPR availableGENE3D2.30.42.10coord: 21..125
e-value: 3.6E-12
score: 48.2
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 24..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig71contigF-serratus_M_contig71:830610..851876 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig71.18310.1mRNA_F-serratus_M_contig71.18310.1Fucus serratus malemRNAF-serratus_M_contig71 824543..851876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig71.18310.1 ID=prot_F-serratus_M_contig71.18310.1|Name=mRNA_F-serratus_M_contig71.18310.1|organism=Fucus serratus male|type=polypeptide|length=154bp
MEAQATATPSPVPVAAEGFPRASLQQWDLFEVVLSKPSGRQKLGMVLKHA
QVVGEKKVKRGAYLASLAEGPSVAQDLGLTPKDRLISVEGLDVKTLQFDR
IVALIRKASFPLTLVWSRQRKDGVPENLPGTAVVAGAQRAVESCALEVPP
APTS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf