prot_F-serratus_M_contig704.18245.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig704.18245.1
Unique Nameprot_F-serratus_M_contig704.18245.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length232
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig704.18245.1 vs. uniprot
Match: D8LGI0_ECTSI (SFM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI0_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 1.870e-89
Identity = 160/227 (70.48%), Postives = 181/227 (79.74%), Query Frame = 0 
Query:    1 MDLTEESKEAQEEHARLLKKVETERRARTIAVPTKAEEVSRKLRELGQPIRLFGEKPADIRERLQRFVAAAEMEEEETEKVDTMVKPKPSFTPRRMQMAGETADAAAKRVAVAAAGAGSATALPKKGEAVYTPASGALLEARRAIATTSFARAKARLVGVKRRRGNADEALAVDRRASETFATMRQLVINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDFE 227
            MDL+EESKEAQ+EHARLLK+VE +RRART+ VPTK E+V++KLR+LGQP+RLF E  ADIRERL+RF+AA+EME+EE EK++ MV PKPSF PR+MQM GE A  AA       A         KK E VYTPAS ALLEAR AIAT SF RAK+RL G KRRRG  +E  AVDRRA ETF+TM+ L INSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD E
Sbjct:   75 MDLSEESKEAQQEHARLLKQVEADRRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAAXXXXXPPAA--------KKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEETSAVDRRAVETFSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE 293
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BLAST of mRNA_F-serratus_M_contig704.18245.1 vs. uniprot
Match: A0A835YL38_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL38_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.020e-36
Identity = 100/228 (43.86%), Postives = 135/228 (59.21%), Query Frame = 0 
Query:    1 MDLTEESKEAQEEHARLLKKVETERRARTIAVPTKAEEVSRKLRELGQPIRLFGEKPADIRERLQRFVAAAEMEEEETEKVDTMVKPKPSFTPRRMQMAGETADAAAKRVAVAAAGAGSATALPK-KGEAVYTPASGALLEARRAIATTSFARAKARLVGVKRRRGNADEALAVDRRASETFATMRQLVINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDFE 227
            M+L+  S+E Q++HA +L+KVE  RRART+AVPT  EEV+R LR LGQPIRLF E  AD+RERL+  +A                         ++Q+ GE   A A  +A A     +A A+ + K E VYT A+  L+EAR  IA+ SFA A  RL   KRRR ++  A A D  A+     ++ LVIN S   D+RPLSA++VSPDG  VAS +W+ + KLW+ +
Sbjct:   52 MELSAASREEQDKHAEMLRKVEAHRRARTMAVPTLPEEVARALRRLGQPIRLFSETLADVRERLREHLA-------------------------QLQLDGEGDAAVASLLAAAEPAKAAAAAVEEGKAEVVYTVAAAPLIEAREVIASYSFAAAPQRLARAKRRRLDSAVASAEDAAAAAACTRLKGLVINVSAVGDERPLSAVRVSPDGSLVASAAWSGVAKLWNMK 254
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BLAST of mRNA_F-serratus_M_contig704.18245.1 vs. uniprot
Match: A0A7S2WFU9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFU9_9STRA)

HSP 1 Score: 137 bits (345), Expect = 3.400e-34
Identity = 92/228 (40.35%), Postives = 129/228 (56.58%), Query Frame = 0 
Query:    1 MDLTEESKEAQEEHARLLKKVETERRARTIAVPTKAEEVSRKLRELGQPIRLFGEKPADIRERLQRFVAAAEMEEEETEKVDTMVKPKPSFTPRRMQMAGETADAAAKRVAVAAAGAGSATALPKKGEAVYTPASGALLEARRAIATTSFARAKARLVGVKRRRGNADEALAVDRRASETFATMRQLVINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDFEA 228
            ++L+  S + Q+ HA LL++VE ERRAR+I VPT  EEV ++LR +GQP+RLFGE  ADIRERL+ F+A  +++ +E   +  + +P     P+                             P+K   VY+ AS  L+EAR+ I   S      R+ GVKRRR +A+E   VD  A ET+  MR L I++SQFAD+RPL A + +P    VAS S    +KLWD E+
Sbjct:   40 LELSATSLDEQDRHAVLLRRVEAERRARSIVVPTNPEEVRQQLRSIGQPVRLFGENLADIRERLREFIARRQLDGDEAPGM--LTEPMEEDKPKA----------------------------PEKKADVYSEASADLVEARQRIFDYSSTHTVERMAGVKRRRESAEERARVDESAKETYKDMRALAISASQFADERPLGACRCAPHADVVASASLAPYIKLWDTES 237
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BLAST of mRNA_F-serratus_M_contig704.18245.1 vs. uniprot
Match: A0A2P4X876_9STRA (U4/U6 small nuclear ribonucleoprotein Prp4 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X876_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.480e-32
Identity = 91/242 (37.60%), Postives = 140/242 (57.85%), Query Frame = 0 
Query:    1 MDLTEESKEAQEEHARLLKKVETERRARTIAVPTKAEEVSRKLRELGQPIRLFGEKPADIRERLQRFVAAAEMEEEETEKVDTMVKPKPSFTPRRMQMAGETADAAAKRVAVAAAGAGSAT---------ALPKKGEAVYTPASGALLEARRAIA---TTSFARAKARLVGVKRRRGNADEALAVDRRASETFATMRQLVINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDFEASN 230
            ++L+E S+ AQE+HA+LL+++E E+RAR IAVPT  EEV R+LR+LG+PI LFGE+PAD RERL+  ++  E+E EET  V  ++                 AD   + V   A  +G+AT           P++ +  Y P     L++ RA     TT+   A+ +    +R+    + A  VD+ A+E +AT  ++   +SQ  D RPL++++ S DG  VA+GSW+ LVK+WD  ++N
Sbjct:   57 LELSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHQVL-----------------ADIQKQEVGTGAGESGAATREERRAGRYTKPQEDQLFYVPIKNEKLKSARAAIFAHTTTVVGARLKRERQERQMSAEERARTVDQHAAELYATALKMANIASQNGDVRPLASVRFSADGNHVATGSWSSLVKVWDASSAN 281
[Close]
BLAST of mRNA_F-serratus_M_contig704.18245.1 vs. uniprot
Match: G4ZDF0_PHYSP (SFM domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZDF0_PHYSP)

HSP 1 Score: 129 bits (324), Expect = 4.720e-31
Identity = 89/228 (39.04%), Postives = 134/228 (58.77%), Query Frame = 0 
Query:    1 MDLTEESKEAQEEHARLLKKVETERRARTIAVPTKAEEVSRKLRELGQPIRLFGEKPADIRERLQRFVAAAEMEEEETEKVDTMVKPKPSFTPRRMQMAGETADAAAKRVAVAAAGAGSATALPKKGEAVYTPASGALLEARRAIA---TTSFARAKARLVGVKRRRGNADEALAVDRRASETFATMRQLVINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 225
            + L+E S+ AQE+HA+LL+++E E+RAR IAVPT  EEV R+LR+LG+PI LFGE+PAD RERL+  ++  E+E EET  V  ++          +Q     A A A+  A    GA    + P++ +  Y P     L+  RA     TTS   A+ +    +++    + A  +D  A+E +AT  ++   +SQ  D RPL++++ S DG  VA+GSW+ LVK+WD
Sbjct:   57 LQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHQVL--------ADIQKQDGGAGAPAEGTAAGDEGAAGQASKPQEDQLFYVPIKNDGLKTARAAVFAHTTSVVGARLKRERQEKQMSAEERARTMDHHAAELYATALRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWD 276
[Close]
BLAST of mRNA_F-serratus_M_contig704.18245.1 vs. uniprot
Match: W2R6V2_PHYPN (SFM domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2R6V2_PHYPN)

HSP 1 Score: 127 bits (319), Expect = 2.250e-30
Identity = 91/237 (38.40%), Postives = 138/237 (58.23%), Query Frame = 0 
Query:    1 MDLTEESKEAQEEHARLLKKVETERRARTIAVPTKAEEVSRKLRELGQPIRLFGEKPADIRERLQRFVAAAEMEEEETEKVDTMVKPKPSFTPRRMQMAGETADAAAKRVAVAAAGAGSATALPKKGEAVYTPASGALLEARRAIATTSFARAKARLVGVKRRRGNADEALA-------VDRRASETFATMRQLVINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDFEASN 230
            + L+E S+ AQE+HA+LL+++E E+RAR IAVPT  EEV R+LR+LG+PI LFGE+PAD RERL+  ++  E+E EET  V  ++    +   R+   AG          A  A GA      P++ +  Y P      EA + +  T FA   A +VG + +R   ++ ++       +D  A+E +AT  ++   +SQ  D RPL++++ S DG  VA+GSW+ LVK+WD   +N
Sbjct:   57 LQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHEVL----ADIQRQDAGAG----------AAGAEGAARKATKPQEDQLFYVPIKN---EALKGVRATIFAHT-ASVVGTRLKRERQEQRMSLEERARTIDHHAAELYATALKMANVASQNGDVRPLASVRYSADGAHVATGSWSSLVKIWDATNAN 275
[Close]
BLAST of mRNA_F-serratus_M_contig704.18245.1 vs. uniprot
Match: A0A5D6XP59_9STRA (SFM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP59_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.520e-30
Identity = 94/240 (39.17%), Postives = 141/240 (58.75%), Query Frame = 0 
Query:    1 MDLTEESKEAQEEHARLLKKVETERRARTIAVPTKAEEVSRKLRELGQPIRLFGEKPADIRERLQRFVAAAEMEEEETEKVDTMVKPKPSFTPRRMQMAGETADAAAKRVAVAAAGAGSATALP----KKGEAVYTPASG-ALLEARRAIATTSFARAKARLVGVKRRRGNADEALAV-----DRRASETFATMRQLVINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDFEASN 230
            + L+E S+ AQE+HA+LL++VE E+RAR I+VPT  +EV  +LR+LG+P+ LFGE+PAD RERL+  ++  E+E EET  V  ++        R ++     A ++A   AV     G+A A P    ++ +  Y P    AL +AR A+   +  R   RL   +  R NAD   A      DR A+E +AT  +++  SSQ  D RP+S++Q + DG  VA+GSW+ LVK+WD   ++
Sbjct:   57 LQLSETSRAAQEKHAQLLRRVEAEKRARNISVPTSVDEVVLRLRQLGEPVTLFGERPADRRERLREILSRLELEAEETGLVHQVLLDIQQQGGRPIEAHFTVAGSSAMSAAVT----GAAVAQPGDEKQEDQLFYIPIQNEALKQARAAMFAMAATRTAERLHQQRAERANADLGAAAGPSDADRHAAELYATADKMINVSSQNGDVRPISSVQYACDGQYVATGSWSGLVKVWDASTAS 292
[Close]
BLAST of mRNA_F-serratus_M_contig704.18245.1 vs. uniprot
Match: A0A662XLR5_9STRA (SFM domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLR5_9STRA)

HSP 1 Score: 126 bits (317), Expect = 4.680e-30
Identity = 90/232 (38.79%), Postives = 137/232 (59.05%), Query Frame = 0 
Query:    1 MDLTEESKEAQEEHARLLKKVETERRARTIAVPTKAEEVSRKLRELGQPIRLFGEKPADIRERLQRFVAAAEMEEEETEKVDTMVKPKPSFTPRRMQMAGETADAAAKRVAVAAAGAGSATALPKKGEAVYTPASGALLE-ARRAIATTSFARAKARLVGVKRRRG-NADEAL-AVDRRASETFATMRQLVINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDFEAS 229
            + L+E S+ AQE+HA+LL+++E E+RAR IAVPT  +EV R+LR+LG+P+ LFGE+PAD RERL+  ++  E+E EET  V  ++          +Q  G    A  +               P++ +  Y P     L+ AR AI   S +   ARL   ++ +  +A+E   AVDR A+E +AT  ++   +SQ  D RPL++++ SPDG  VA+GSW+ LVK+WD  ++
Sbjct:   63 LQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVDEVIRRLRQLGEPVTLFGERPADRRERLRELLSRLELEAEETGFVHQVL--------ADIQKQGSAPGAGEEAAXXXXXXXXXXXXKPQEDQLFYVPIKNVELKNARAAIFAHSVSAGSARLKRERQEKQLSAEERTRAVDRHAAELYATAAKMANIASQNGDVRPLASVRYSPDGAHVATGSWSSLVKVWDATSA 286
[Close]
BLAST of mRNA_F-serratus_M_contig704.18245.1 vs. uniprot
Match: H3GS79_PHYRM (SFM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GS79_PHYRM)

HSP 1 Score: 126 bits (316), Expect = 6.070e-30
Identity = 91/236 (38.56%), Postives = 137/236 (58.05%), Query Frame = 0 
Query:    1 MDLTEESKEAQEEHARLLKKVETERRARTIAVPTKAEEVSRKLRELGQPIRLFGEKPADIRERLQRFVAAAEMEEEETEKVDTMVKPKPSFTPRRMQMAGETADAAAKRVAVAAAGAGSATALPKKGEAVYTPASGALLEARRAIATTSFARAKARLVGVKRRRGNADEALAVDRRA-------SETFATMRQLVINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDFEAS 229
            + L+E S+ AQE+HA+LL+++E E+RAR I+VPT  EEV R+LR+LG+PI LFGE+PAD RERL+  ++  E+E EET  V  ++    +   ++   AG T   AA    V  AG       P+  +  Y P     L+  R   T  FA A   +VG + +R   ++ ++V+ RA       +E +AT  ++    SQ  D RPL+ ++ S DG  VA+GSW+ LVK+WD  ++
Sbjct:   54 LQLSESSRAAQEKHAQLLRRIEAEKRARNISVPTSVEEVVRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHQVL----ADVQKQGPGAGGTETGAASEEVVHVAG---RAVRPQMDQLFYVPLKNEKLKKAR---TAIFAHAST-VVGARLKRERQEKQMSVEERARTVDHHAAELYATALKMANIGSQNGDVRPLAGVRYSADGAHVATGSWSSLVKVWDATSA 278
[Close]
BLAST of mRNA_F-serratus_M_contig704.18245.1 vs. uniprot
Match: A0A3R7GQX6_9STRA (SFM domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GQX6_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.220e-29
Identity = 93/234 (39.74%), Postives = 136/234 (58.12%), Query Frame = 0 
Query:    1 MDLTEESKEAQEEHARLLKKVETERRARTIAVPTKAEEVSRKLRELGQPIRLFGEKPADIRERLQRFVAAAEMEEEETEKVDTMVKP--KPSFTPRRMQ-MAGET---ADAAAKRVAVAAAGAGSATALPKKGEAVYTPASGALLEARRAIA---TTSFARAKARLVGVKRRRGNADEALAVDRRASETFATMRQLVINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWD 225
            + L+E S+ AQE+HA+LL+++E E+RAR IAVPT  EEV R+LR+LG+PI LFGE+PAD RERL+  ++  E+E EET  V  ++    K    P   + +AGET   AD + K               P++ E  Y P     L+  RA     TTS   A+ +    +++    + A  VD  A+E +AT  ++   +SQ  D RPL++++ S DG  VA+GSW+ LVK+WD
Sbjct:   60 LQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLRGILSQLELEAEETGFVHQVLADIQKQGAVPGGGETIAGETGAEADQSDK---------------PQEDELFYVPIKNDQLKKVRAAIFDHTTSIVGARLKRERQEKQMSEEERARTVDHHAAELYATTLRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWD 278
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig704.18245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGI0_ECTSI1.870e-8970.48SFM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YL38_9STRA1.020e-3643.86Quinon protein alcohol dehydrogenase-like superfam... [more]
A0A7S2WFU9_9STRA3.400e-3440.35Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2P4X876_9STRA1.480e-3237.60U4/U6 small nuclear ribonucleoprotein Prp4 (Fragme... [more]
G4ZDF0_PHYSP4.720e-3139.04SFM domain-containing protein n=5 Tax=Phytophthora... [more]
W2R6V2_PHYPN2.250e-3038.40SFM domain-containing protein n=14 Tax=Phytophthor... [more]
A0A5D6XP59_9STRA3.520e-3039.17SFM domain-containing protein n=1 Tax=Pythium bras... [more]
A0A662XLR5_9STRA4.680e-3038.79SFM domain-containing protein n=2 Tax=Nothophytoph... [more]
H3GS79_PHYRM6.070e-3038.56SFM domain-containing protein n=1 Tax=Phytophthora... [more]
A0A3R7GQX6_9STRA3.220e-2939.74SFM domain-containing protein n=2 Tax=Phytophthora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..27
NoneNo IPR availablePANTHERPTHR19846WD40 REPEAT PROTEINcoord: 1..227
NoneNo IPR availablePANTHERPTHR19846:SF0U4/U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP4coord: 1..227
IPR014906Pre-mRNA processing factor 4 (PRP4)-likeSMARTSM00500pr04_2coord: 34..83
e-value: 2.0E-7
score: 40.7
IPR014906Pre-mRNA processing factor 4 (PRP4)-likePFAMPF08799PRP4coord: 40..66
e-value: 1.3E-11
score: 43.8
IPR036285PRP4-like superfamilyGENE3D1.10.720.150coord: 3..83
e-value: 2.5E-9
score: 38.4
IPR036285PRP4-like superfamilySUPERFAMILY158230PRP4-likecoord: 17..72
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 147..231
e-value: 9.3E-6
score: 26.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 193..231
score: 9.272
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 193..231
score: 9.177
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 195..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig704contigF-serratus_M_contig704:259282..262428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig704.18245.1mRNA_F-serratus_M_contig704.18245.1Fucus serratus malemRNAF-serratus_M_contig704 254314..267501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig704.18245.1 ID=prot_F-serratus_M_contig704.18245.1|Name=mRNA_F-serratus_M_contig704.18245.1|organism=Fucus serratus male|type=polypeptide|length=232bp
MDLTEESKEAQEEHARLLKKVETERRARTIAVPTKAEEVSRKLRELGQPI
RLFGEKPADIRERLQRFVAAAEMEEEETEKVDTMVKPKPSFTPRRMQMAG
ETADAAAKRVAVAAAGAGSATALPKKGEAVYTPASGALLEARRAIATTSF
ARAKARLVGVKRRRGNADEALAVDRRASETFATMRQLVINSSQFADDRPL
SAIQVSPDGGTVASGSWTCLVKLWDFEASNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014906PRP4-like
IPR036285PRP4-like_sf
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam