prot_F-serratus_M_contig70.18195.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig70.18195.1
Unique Nameprot_F-serratus_M_contig70.18195.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length453
Homology
BLAST of mRNA_F-serratus_M_contig70.18195.1 vs. uniprot
Match: A0A6H5JB15_9PHAE (AhpC-TSA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB15_9PHAE)

HSP 1 Score: 434 bits (1117), Expect = 6.270e-148
Identity = 240/381 (62.99%), Postives = 279/381 (73.23%), Query Frame = 0
Query:   71 MGKQGELMEQMAKAKRDRLKKELEDKLRESGDLPPDLEGDTGKKPAVASGGARMKPERSWREAGAAKAAAAPSSAASASPKKGTPAETGAGGQVAATAFKAAGTAAGSGKVWPSTQPEGRSGDAYDLYDDLLEGTGSGDGKESQFSPELENPNASYEEYGAMRDKAQWDAVVSGKASVANRSPLASESEYNDFEAMLTGVVRVTPENLGPKAAEKKLIKRAEQQLPQAFSTGDFAPLDPWRLLADSEELPRGGSSQVNFGLFQGEKPLLVVVDPIPGSGEMRQAMYELNTRMPRKLVHVVAVTADSPGSNRKAAKKSRLSFPVLSDQSGEWMLAYRVTIGGQREKMAFLIEPELGRIVNVWSNFDALSLVDLVKDYISSNR 451
            MGKQGELMEQMAKA+RDR+K+ELE+KLRESGDLP + + D  K  A     AR+KP+RSWR+AGAAK    P SA+                          G A   GKVWPST+ EGRSGD Y+ Y+ LLE TG   G  S+ SPE+ENP A Y ++  MRDKAQWDAVV+GK  V NRSP+ASE+EY+DFEAML+G  R++  +LG KAAEKKL KR E+++   FS GDFAPLDPWRLL+D +     G+  VNFGLFQG KPLLVV +P PGSG M+QAMYELNTRMPRKLV VVAVT D P SNRK AKKSR+ FPVLSD+ GEWMLAYRVT GG RE MAFLIEP+LGRIVNVWSNFDALSLVDLVK + + +R
Sbjct:    1 MGKQGELMEQMAKAQRDRMKRELEEKLRESGDLPKEEDDDAAKPAAAKGAAARIKPDRSWRQAGAAK----PPSASXXXXXX-----------XXXXXXXKTGAAGVGGKVWPSTREEGRSGDKYEEYNQLLESTGDHSG--SRKSPEVENPRAVYTDWETMRDKAQWDAVVAGKKPVVNRSPVASETEYSDFEAMLSGGARISSNSLGLKAAEKKLAKRVEKKVDLTFSRGDFAPLDPWRLLSDVDGNKASGA--VNFGLFQGTKPLLVVAEPKPGSGAMKQAMYELNTRMPRKLVDVVAVTVDPPASNRKVAKKSRILFPVLSDEGGEWMLAYRVTQGGLRENMAFLIEPDLGRIVNVWSNFDALSLVDLVKGHFNPDR 362          
BLAST of mRNA_F-serratus_M_contig70.18195.1 vs. uniprot
Match: A0A835YU18_9STRA (AhpC-TSA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU18_9STRA)

HSP 1 Score: 129 bits (323), Expect = 2.060e-30
Identity = 77/228 (33.77%), Postives = 114/228 (50.00%), Query Frame = 0
Query:  230 GAMRDKAQWDAVVSGKASVANRSPLASESEYNDFEAMLT---------GVVRVTPENLGPKAAEKKLIKRAEQQLPQA--FSTGDFAPLDPWRL-LADSEELPRGGSSQVNFGLFQGEKPLLVVVDPIPGSGEMRQAMYELNTRMPRKLVHVVAVTADSPGSNRKAAKKSRLSFPVLSDQSGEWMLAYRVTIGGQREKMAFLIEPELGRIVNVWSNFDALSLVDLVKD 445
            GA      W      + +V        + EY  FE +L          G +   P +L P      + + +      A  F  GDFAPL+ W   L D+E       +  ++   +G +PL+++ D  P + +MR+ + ELN R PR    +VA+T D+P  NR+ AKKS L FP+LSD+S EW+ AY VT     EKM F++EP  GR   V  + D+LS+V+ VK+
Sbjct:   64 GAPVANTDWRTGQKLQPTVVEVEEATVQEEYALFEDLLEKDSELCFREGALDADPADLPPDVDAPAVTRSSTAAAANAIFFEPGDFAPLEVWAAALRDTE------GAAASYASVRGARPLVIIADARPANADMRETLIELNRRFPRAAADLVAITPDTPAQNRRVAKKSNLFFPLLSDESREWLRAYLVTARVPWEKMVFVLEPRYGRFTAVVRDVDSLSVVEQVKE 285          
BLAST of mRNA_F-serratus_M_contig70.18195.1 vs. uniprot
Match: A0A7S2V3J8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3J8_9STRA)

HSP 1 Score: 111 bits (278), Expect = 4.630e-24
Identity = 56/149 (37.58%), Postives = 88/149 (59.06%), Query Frame = 0
Query:  299 FSTGDFAPLDPWRLLADSEELPRGGSSQVNFGLFQGE-KPLLVVVDPIPGSGEMRQAMYELNTRMPRKLVHVVAVTADSPGSNRKAAKKSRLSFPVLSDQSGE-WMLAYRVTIGGQREKMAFLIEPELGRIVNVWSNFDALSLVDLVKD 445
             + GD APLD W  L D +         V F  F+ + KP++V+VDP   SG+++ A+ E+N+R P     +VA++ D P  NRK +KKS   FP+L+D   + WM  Y V      EK+ F+IEP+LG+++ V  + D+ ++V+ +KD
Sbjct:  140 LAAGDLAPLDVWNQLKDVK------GDSVTFSEFKADGKPIVVIVDPRRASGDLKSALLEINSRFPETSAKIVAISCDKPSDNRKLSKKSMFFFPLLADTPEKTWMDTYGVLNNKSLEKVIFIIEPKLGKVLTVLRDIDSTAVVETIKD 282          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig70.18195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JB15_9PHAE6.270e-14862.99AhpC-TSA domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YU18_9STRA2.060e-3033.77AhpC-TSA domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2V3J8_9STRA4.630e-2437.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 79..99
NoneNo IPR availableGENE3D3.40.30.10coord: 315..449
e-value: 1.4E-10
score: 43.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..452
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.753
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 321..423
e-value: 1.3E-6
score: 28.3
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 336..439

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig70contigF-serratus_M_contig70:663772..672339 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig70.18195.1mRNA_F-serratus_M_contig70.18195.1Fucus serratus malemRNAF-serratus_M_contig70 662505..672382 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig70.18195.1 ID=prot_F-serratus_M_contig70.18195.1|Name=mRNA_F-serratus_M_contig70.18195.1|organism=Fucus serratus male|type=polypeptide|length=453bp
MRIIELLVLTSLTGWVGAYVAPIPPSRSPGATAGDHIQKASSGGPGGSVA
PPSHARRCRPLFRKGFSKGGMGKQGELMEQMAKAKRDRLKKELEDKLRES
GDLPPDLEGDTGKKPAVASGGARMKPERSWREAGAAKAAAAPSSAASASP
KKGTPAETGAGGQVAATAFKAAGTAAGSGKVWPSTQPEGRSGDAYDLYDD
LLEGTGSGDGKESQFSPELENPNASYEEYGAMRDKAQWDAVVSGKASVAN
RSPLASESEYNDFEAMLTGVVRVTPENLGPKAAEKKLIKRAEQQLPQAFS
TGDFAPLDPWRLLADSEELPRGGSSQVNFGLFQGEKPLLVVVDPIPGSGE
MRQAMYELNTRMPRKLVHVVAVTADSPGSNRKAAKKSRLSFPVLSDQSGE
WMLAYRVTIGGQREKMAFLIEPELGRIVNVWSNFDALSLVDLVKDYISSN
RL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000866AhpC/TSA
IPR036249Thioredoxin-like_sf